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Mesembs and Molecules

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  • 7/31/2019 Mesembs and Molecules

    1/3VELD&FLORA | SEPTEMBER 200858

    The genetic fingerprinting of criminals

    no longer belongs to the realm of sci-

    ence fiction. Similar molecular data has

    become a common tool at the disposal of

    plant taxonomists, contributing tremendously

    to the better understanding of how plant fami-

    lies are related to each other. However, when

    descending from the rank of family down the

    hierarchy of life, ranks below, i.e. groups of

    genera, individual genera or species, have not

    all yet been reliably identified by molecular

    means. This holds especially true for the vygie

    family (Aizoaceae/Mesembryanthemaceae)

    where researchers have failed to get meaning-

    ful groupings of genera or species after analys-

    ing a number of genes.

    Yet, species remain the most fundamental

    rank in our line of work. Clear and reliable

    species boundaries are required not only for

    taxonomic purposes, but also for conservation

    endeavours. Delosperma herbeum and D. davyi

    are a case in point. D. davyi is known from a

    few populations in Gauteng and is listed as a

    Red Data species. Its conservation is thus cur-rently actively mediated by nature conserva-

    tion authorities. However, D. davyicould be a

    mere variety or ecotype of the widespread D.

    herbeum, in which case it is not in need of con-

    servation. Differences between the two species

    lie in growth form, with D. davyi developing

    long, trailing or climbing, persisting vegetative

    branches as opposed to the predominantly

    erect annual flowering branches in D. herbeum.

    From an ecological perspective, D. davyioccurs

    in shady riverine woods and D. herbeum occurs

    in open grassland.

    In the view of the highlighted inability of

    gene sequencing to provide meaningful data,

    a different molecular technique known as

    amplified fragment length polymorphism

    (AFLP) was considered. Instead of determin-

    ing the order of all the building blocks in a

    particular gene, as is done in gene sequencing,

    the entire DNA content of the plant is chopped

    up into fragments beginning and ending with

    predetermined short sequences. Plants that

    share the same complement of fragments are

    perceived to be related. The AFLP technique

    has been used with great success in studying

    taxonomic issues below the rank of species, i.e.

    at the population level, and is therefore ideally

    suited to address the D. davyi/D. herbeum issue

    mentioned above. But, could this techniqueperchance also distinguish between vygie spe-

    cies, keeping in mind that many fynbos fami-

    lies and genera (vygies included) appear to be

    recently evolved, and perhaps, from a molecu-

    lar point of view, still act like populations?

    In response to the D. davyi/D. herbeum affair,

    a number ofDelosperma herbeum populations

    from the North West, Gauteng, Free State and

    Limpopo provinces of South Africa were ana-

    lysed as well as a single population ofD. davyi

    (see accompanying map). To test the AFLP

    technique to distinguish between vygie spe-

    cies, populations of D. knox-daviesii, D. gau-

    tengense, D. purpureum, D. leendertziae and

    D. vogtsii (all occurring in Gauteng) were also

    included in the study.

    After scoring a total of 158 fragments for 99

    individuals representing a total of 30 popula-

    tions, a cluster analysis, where individuals are

    grouped/clustered on the basis of shared simi-

    larities, was embarked upon. The majority of

    individuals formed locality-specific groupings.

    In addition, some broad correlations appear to

    exist between the clusters obtained in D. her-

    beum and their distribution. The Sun City and

    Groot Marico populations (labelled 21 and 22

    on the map) form a cluster to the north-west of

    the study area. There also appears to be a con-

    nection between the north-eastern Pretoriaand Naboomspruit populations (labelled 19

    and 20 on the map). The geographic signal in

    the Vredefort Dome (populations 5-7) is less

    clear. Population 5 clusters with samples from

    Potchefstroom and Klerksdorp, whereas popu-

    Delosperma gautengense with broader petals than found in D. herbeum. Photo: M.H. Buys.

    modern techniques in plant taxonomy

    Discovering the Delosperma family tree via molecules

    Mesembs and Molecules

    by M.H. Buys, Compton Herbarium, South African National Biodiversity Institute, Kirstenbosch and Dept.

    of Botany and Zoology, University of Stellenbosch

  • 7/31/2019 Mesembs and Molecules

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  • 7/31/2019 Mesembs and Molecules

    3/3VELD&FLORA | SEPTEMBER 200860

    lation 6 has ties to the north, clustering with

    the population from Fochville, and population

    7, from south of the Vaal River, has apparent

    similarities with the populations to the north-

    east ranging from Sasolburg to Johannesburg.

    D. davyi and D. herbeum from North Riding

    form a cluster separate from the remaining

    populations ofD. herbeum.

    While the above results are somewhat

    ambiguous regarding the status of D. davyi,

    further statistical analyses not reported here,

    as well as morphological considerations, sug-

    gest D. davyito be a superfluous name.

    The AFLP data can readily distinguish

    between species of Delosperma. The yellow

    flowered D. vogtsiigroups with the white flow-

    ered D. gautengense. The mauve coloured D.

    knox-daviesii attaches itself, in turn, to this

    group. The yellow flowered D. leendertziae

    groups with the mauve flowered D. purpureum.

    The yet unidentified and possibly new mauve

    flowered species from Ditholo clusters with themainly white flowered D. herbeum.

    Although flower colour is known to be an

    unreliable taxonomic character, it was tempt-

    ing to consider species with similarly col-

    oured flowers and of equal morphology, e.g.

    D. leendertziae and D. vogtsii, to be one and

    the same entity. Our results suggest this not

    to be the case. Where-as DNA sequencing

    approaches have failed to resolve even generic

    relationships - let alone species - in the vygie

    family, the AFLP technique holds promise for

    vygie systematics at lower ranks.

    *Extracted and modified in part from Buys et al. 2008.

    Applying AFLPs in Aizoaceae: The Delosperma herbeum

    complex as a case study. Biochemical Systematics and

    Ecology36, 92-100, with permission from Elsevier.

    TOP: Delosperma davyiwith the typical longer leaves and internodes which are prob-

    ably due to the shady habitat in which it occurs.

    ABOVE : Delosperma herbeum, the most widespread Delosperma species in Gauteng

    and North West provinces. Flowers here pure white.

    ABOVE RIGHT: Delosperma vogtsii, resembling D. leendertziae, but on average possess-

    ing more petals than the latter and distinguishable based on AFLP data.

    BELOW: Delosperma leendertziae, resembling D. vogtsii, but on average possessingfewer petals than the latter, and distinguishable based on AFLP data.

    BELOW RIGHT: Transfer of knowledge. Heidi Hartmann pointing out diagnostic charac-

    ters ofDelosperma herbeum to Wim Buys.

    LEFT: Delosperma knox-daviesiiwith petals more numerous than in D. purpureum.

    BOTTOM LEFT: Delosperma purpureum with broad petals similar to D. gautengense. Note

    mauve filaments. Photos: M.H. Buys.