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Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis, polygenics, and lethal alleles.
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Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Dec 18, 2015

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Page 1: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Mendelian GeneticsConcept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis, polygenics, and lethal alleles.

Page 2: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

We just need to practice…

Try… On Worksheets:Multiple Choice: 1, 2, 3, 5, 7, 8, 10, 13Genetics Problems: 1, 2, 6, 12, 13

Learning Goal: How are traits

passed down from

parents to offspring?

Page 3: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Try This!

A brown eyed male has 5 children with a blue eyed female. 4 of the children have brown eyes and 1 child has blue eyes. If brown eyes are dominant to blue eyes, what is the genotype of each parent?

Page 4: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Degrees of Dominance

Complete Dominance Homozygous Dominant and Heterozygous are

indistinguishable Monohybrid Phenotypic Ratio – 3:1

Incomplete Dominance Heterozygotes display a blended phenotype Monohybrid Phenotypic Ratio – 1:2:1

Codominance Heterozygotes display both traits (separate, distinguishable) Monohybrid Phenotypic Ratio - 1:2:1

Page 5: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Degrees of Dominance

Not cut and dry… Organism Biochemical Molecular

Page 6: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Multiple Alleles

Many alleles for one gene Blood Type

Example: If a male with blood type AB has children with a female with blood type O, what is the predicted phenotypic ratio of their children?

Page 7: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Multiple Alleles

Example: If a male with blood type AB has children with a female with blood type O, what is the predicted phenotypic ratio of their children?

Type AB male x Type O Female IAIB ii

IA IB

ii

Page 8: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Multiple Alleles

Example: If a male with blood type AB has children with a female with blood type O, what is the predicted phenotypic ratio of their children?

Type AB male x Type O Female IAIB ii

IA IB

i IAi IBii IAi IBi

Page 9: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Multiple Alleles

Example: If a male with blood type AB has children with a female with blood type O, what is the predicted phenotypic ratio of their children?

Type AB male x Type O Female IAIB ii

IA IB

i IAi IBii IAi IBi

Predicted Phenotypic Ratio:

Page 10: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Multiple Alleles

Example: If a male with blood type AB has children with a female with blood type O, what is the predicted phenotypic ratio of their children?

Type AB male x Type O Female IAIB ii

IA IB

i IAi IBii IAi IBi

Predicted Phenotypic Ratio:

1 Type A: 1 Type B

Page 11: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Pleiotropy

One gene that has multiple effects on phenotypic characters Sickle cell Cystic fibrosis

Page 12: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Epistasis

One gene having an effect over another gene Mouse coat colour

Example: In corn, a dominant allele I inhibits kernel colour, while the recessive allele i permits colour when homozygous. At a different locus, the dominant allele P causes purple kernel colour, while the homozygous genotype pp causes red kernels. If plants heterozygous at both loci are crossed, what will be the phenotypic ratio of the offspring?

Page 13: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Epistasis Example: In corn, a dominant allele I inhibits kernel

colour, while the recessive allele i permits colour when homozygous. At a different locus, the dominant allele P causes purple kernel colour, while the homozygous genotype pp causes red kernels. If plants heterozygous at both loci are crossed, what will be the phenotypic ratio of the offspring? (no colour=yellow)

IiPp x IiPp

Phenotypes:

P pP PP Ppp Pp pp

I iI II Iii Ii ii

Page 14: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Epistasis Example: In corn, a dominant allele I inhibits kernel colour,

while the recessive allele i permits colour when homozygous. At a different locus, the dominant allele P causes purple kernel colour, while the homozygous genotype pp causes red kernels. If plants heterozygous at both loci are crossed, what will be the phenotypic ratio of the offspring? (no colour=yellow)

IiPp x IiPp

Phenotypes:Yellow I___Purple iiP_Red iipp

P pP PP Ppp Pp pp

I iI II Iii Ii ii

Page 15: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Epistasis Example: In corn, a dominant allele I inhibits kernel colour,

while the recessive allele i permits colour when homozygous. At a different locus, the dominant allele P causes purple kernel colour, while the homozygous genotype pp causes red kernels. If plants heterozygous at both loci are crossed, what will be the phenotypic ratio of the offspring? (no colour=yellow)

IiPp x IiPp

Phenotypes:Yellow I___ 1 x ¾ = ¾ = 12/16Purple iiP_ ¾ x ¼ = 3/16Red iipp ¼ x ¼ = 1/16

P pP PP Ppp Pp pp

I iI II Iii Ii ii

Page 16: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Epistasis Example: In corn, a dominant allele I inhibits kernel colour,

while the recessive allele i permits colour when homozygous. At a different locus, the dominant allele P causes purple kernel colour, while the homozygous genotype pp causes red kernels. If plants heterozygous at both loci are crossed, what will be the phenotypic ratio of the offspring? (no colour=yellow)

IiPp x IiPp

Phenotypes:Yellow I___ 1 x ¾ = ¾ = 12/16Purple iiP_ ¾ x ¼ = 3/16Red iipp ¼ x ¼ = 1/16

P pP PP Ppp Pp pp

I iI II Iii Ii ii

Predicted Phenotypic Ratio:

Page 17: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Epistasis Example: In corn, a dominant allele I inhibits kernel colour,

while the recessive allele i permits colour when homozygous. At a different locus, the dominant allele P causes purple kernel colour, while the homozygous genotype pp causes red kernels. If plants heterozygous at both loci are crossed, what will be the phenotypic ratio of the offspring? (no colour=yellow)

IiPp x IiPp

Phenotypes:Yellow I___ 1 x ¾ = ¾ = 12/16Purple iiP_ ¾ x ¼ = 3/16Red iipp ¼ x ¼ = 1/16

P pP PP Ppp Pp pp

I iI II Iii Ii ii

Predicted Phenotypic Ratio:

12 Yellow: 3 Purple: 1 Red

Page 18: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Polygenic Inheritance

Two or more genes affecting one phenotypic character Quantitative characters – continuum rather than

“either/or” Skin colour in humans Spike weed height

Number of phenotypic classes possible = #alleles+1

Page 19: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Try This! The height of spike weed is a result of polygenetic

inheritance involving three genes, each of which can contribute an additional 5cm to the base height of the plant, which is 10cm. The tallest plant (AABBCC) can reach a height of 40cm.

A) If a tall plant (AABBCC) is crossed with a base-height plant (aabbcc), what is the height of the F1 plants?

B) How many phenotypic classes will there be in the F2?

c) What is the probability of seeing a 20cm plant in the F2 generation?

Page 20: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

A) If a tall plant (AABBCC) is crossed with a base-height plant (aabbcc), what is the height of the F1 plants?

The parental cross produced 25cm tall F1 plants, all AaBbCc plants with 3 units of 5 cm added to the base height of 10cm.

Page 21: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

B) How many phenotypic classes will there be in the F2?

General Rule: number of phenotypic classes resulting from a cross of heterozygotes equals the number of alleles involved plus one.

(AaBbCc ) 6 alleles + 1 = 7

6 dominant alleles: 40 cm5: 35 cm4: 30 cm3: 25 cm2: 20 cm1: 15 cm0: 10 cm

Page 22: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

c) What is the probability of seeing a 20cm plant in the F2 generation?

Phenotype: 20cm

Genotype: 2 dominant alleles

AaBbCc x AaBbCc

AAbbcc ¼ x ¼ x ¼ = 1/64AaBbcc ½ x ½ x ¼ = 1/16 = 4/64 AabbCc ½ x ¼ x ½ = 1/16 = 4/64 aaBBcc ¼ x ¼ x ¼ = 1/64aaBbCc ¼ x ½ x ½ = 1/16 = 4/64 aabbCC ¼ x ¼ x ¼ = 1/64

Different ways of getting the same thing… add!

15/64

Page 23: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Lethal Alleles

Recessive lethal allele 2:1 ratio if lethal before birth Cystic fibrosis

Dominant lethal allele Must show effects after reproductive age

Why? Huntington’s Disease

Page 24: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Environmental Effects

Hydrangeas Plant a tin can next to them and see what happens!

Page 25: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

Don’t forget about pedigrees!

Page 26: Mendelian Genetics Concept 2: Analyzing the effects of complex genetic crosses such as incomplete/co- dominance, multiple alleles, pleiotropy, epistasis,

We just need to practice…

On Worksheets for Concept 2:Multiple Choice: 4, 6, 9, 11, 12, 14, 15, 16Genetics Problems: 3, 4, 5, 7, 8, 9, 10, 11, 14

Learning Goal: How are traits

passed down from

parents to offspring?