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CAN A RIVER-RESERVOIR INTERFACE SERVE AS NURSERY HABITAT FOR RIVERINE FISHES? by Matthew R. Acre, B.S. A Thesis In Wildlife, Aquatic, and Wildlands Science Management Submitted to the Graduate Faculty Of Texas Tech University in Partial Fulfillment of The Requirements for The Degree of MASTER OF SCIENCE Approved Timothy B. Grabowski Chair of Committee Nathan G. Smith Allison Pease Mark Sheridan Dean of the Graduate School August, 2015
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Page 1: Matthew R. Acre, B.S. A Thesis In Wildlife, Aquatic, and ...

CAN A RIVER-RESERVOIR INTERFACE SERVE AS NURSERY HABITAT FOR

RIVERINE FISHES?

by

Matthew R. Acre, B.S.

A Thesis

In

Wildlife, Aquatic, and Wildlands Science Management

Submitted to the Graduate Faculty

Of Texas Tech University in

Partial Fulfillment of

The Requirements for

The Degree of

MASTER OF SCIENCE

Approved

Timothy B. Grabowski

Chair of Committee

Nathan G. Smith

Allison Pease

Mark Sheridan

Dean of the Graduate School

August, 2015

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Copyright © 2015

Matthew R. Acre

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Acknowledgements

This work was made possible by funding from Texas Parks and Wildlife

Department (contract #432957), Texas Tech University, and the Texas Cooperative

Fisheries and Wildlife Research Unit. This work was conducted under the auspices of the

TTU Animal Care and Use (AUP #13004-01). I would like to recognize Bob Betsill at

the Heart of The Hills Research Unit for his support. I would like to thank my committee

chair, primary investigator, and friend Tim Grabowski. His guidance and wisdom is

appreciated and always needed. Thank you as well to my other committee members, Nate

Smith and Allison Pease, who always made themselves available to my questions and

always had time to lend a helping hand. Thank you to all the students from the

Grabowski Lab and Pease Lab both past and present for your support, the collaborative

nature of the graduate students from the labs made a daunting task a little less so. To

name a few of those graduate students who I could not have done this without; Jessica

East, Julia Mueller, Jillian Groeschel, Wade Massure, and Jessica Pease. During the

course of this research I was fortunate to have a committed undergraduate student as my

field technician. Daniel Logue took it upon himself to be responsible for much more than

just field work and was an invaluable resource whom without this work does not get

completed. Thank you, Dan. I am also grateful for lab technicians who spent countless

hours under the scope to complete this research; thank you Max Berlin, Amanda Emert,

and Grant Kilcrease. Also thank you to the countless number of people who chipped in

invaluable advice on everything from logistics to net construction. Last, but most

certainly not least, thank you to my mother and father for their patience and support

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throughout a strenuous two years, I could not have done this without you and could not

have kept my sanity without your frequent field visits.

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Table of Contents

Acknowledgements.............................................................................................................ii

Abstract...............................................................................................................................v

List of Tables......................................................................................................................vi

List of Figures....................................................................................................................vii

Introduction.........................................................................................................................1

Methods...............................................................................................................................6

Data Analyses....................................................................................................................15

Results................................................................................................................................17

Discussion..........................................................................................................................31

Literature Cited..................................................................................................................38

Appendix............................................................................................................................44

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Abstract

Anthropogenic modifications to riverine systems have reduced access to

important off-channel nursery habitats, but the river-reservoir interface (RRI) may offer

surrogate nursery habitat. I sampled ichthyoplankton assemblages in off-channel and

main channel habitats of the Lake Livingston RRI and middle Trinity River to: 1)

compare species composition and abundance in these different habitat types, and 2)

evaluate the influence of abiotic characteristics on ichthyoplankton assemblages in these

habitats. Ichthyoplankton was sampled using light traps and paired push nets deployed

off jet-propelled kayaks during March—July in 2013 and February—June in 2014. A

total of 44,029 larval fishes were collected, representing 27 taxa. A few taxa were

dominant at all sites, such as Threadfin Shad Dorosoma petenense and Inland Silverside

Menidia beryllina; however, less common taxa such as moronids, sciaenids, and

centrarchids were captured more frequently in RRI habitats. Sites with frequent

connectivity to the main channel, in particular the RRI backwater habitats, had higher

taxonomic richness, diversity, and overall abundance than similar habitats lacking this

connectivity. Canonical correspondence analysis suggests that there are major divisions

between mesohabitats in the Trinity River being driven by physicochemical components

and species assemblage structure related to connectivity to the main channel of the river.

These differences suggest RRI habitat may act as a surrogate nursery for some species

when access to other off-channel habitat is limited.

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List of Tables

1 Means of the physicochemical and habitat variables collected for the river

backwaters (RIVBW), river main channel (RIVMC), river-reservoir interface

backwaters (RRIBW), and river-reservoir interface main channel (RRIMC) in the

Trinity River and Lake Livingston from March—July in 2013 and February—June

in 2014.............................................................................................................................9

2 Canonical correlation analysis results from push net transects of fish assemblage

data collected from 12 sites in the Trinity River and Lake Livingston, Texas

March—July in 2013 and February—June in 2014......................................................29

3 Standardized canonical discriminant coefficients for variables used in canonical

correlation analysis of the Trinity River and Lake Livingston larval fish

assemblages from push net transects, March—July in 2013 and February—June in

2014...............................................................................................................................30

A.1 Mean CPUE and H’ for larval fishes captured in 2013 and 2014 from the Trinity

River, Texas by site.......................................................................................................44

A.2 Canonical correlation analysis coefficients for larval fishes and habitat variables

collected from the Trinity River, Texas March—July in 2013 and February—June

in 2014...........................................................................................................................45

A.3 Taxonomic richness in push net (PN) and light trap (LT) samples taken from

riverine backwaters (RIVBW), riverine main channel (RIVMC), river-reservoir

interface backwaters (RRIBW), and river-reservoir interface main channel

(RRIMC) from the Trinity River and Lake Livingston, Texas March—July in 2013

and February—June in 2014.........................................................................................46

A.4 Fish collected in the Trinity River, Texas March—July in 2013 and

February—June in 2014 by site and year. An ‘x’ signifies a species was captured at

that site and a blank space indicates that the species was not captured........................47

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List of Figures

1 The Trinity River, located entirely in Texas, runs from Dallas-Ft. Worth metroplex

and discharges into the Galveston Bay near Houston, Texas..........................................8

2 Two-way ANOVA to analyze mean catch per unit effort (CPUE) and Shannon’s

Diveristy Index (H’) for light trap and push net collections in the Trinity River,

Texas which were collected every three weeks from March—July in 2013 and

February—June in 2014................................................................................................18

3 Shannon’s Diveristy Index (H’) for light trap and push net collections in the Trinity

River, Texas which were collected every three weeks from March—July in 2013

and February—June in 2014.........................................................................................19

4 Timing of species appearance in samples taken from riverine backwaters (RIVBW),

riverine main channel (RIVMC), river-reservoir interface backwaters (RRIBW),

and river-reservoir interface main channel (RRIMC) from the Trinity River and

Lake Livingston, Texas March—July in 2013 and February—June in 2014...............22

5 Larval fish diversity in the Trinity River, Texas March—July in 2013 and

February—June in 2014 by mesohabitat type; river-reservoir interface backwater

(RRIBW), river-reservoir interface main channel (RRIMC), riverine backwater

(RIVBW), riverine main channel (RIVMC) ................................................................23

6 Larval fish diversity in 10 backwater sites sampled in the upper middle (RIVBW…)

and the river-reservoir interface (RRIBW…) of the Trinity River, Texas from

March—July in 2013 and February—June in 2014......................................................25

7 Canonical correspondence analysis linking species composition collected in the river

backwaters (RIVBW), river main channel (RIVMC), river-reservoir interface main

channel (RRIMC), and river-reservoir interface backwaters (RRIBW) in

March—July in 2013 and February—June in 2014 with physicochemical variables

from the Trinity River and Lake Livingston, Texas......................................................28

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Chapter I

Introduction

Anthropogenic alterations of riverine systems, in particular dams and reservoirs,

have had negative consequences for the diversity and productivity of riverine fish

assemblages (Baxter 1977; Pringle et al. 2000; Poff and Zimmerman 2010). Dam and

reservoir construction is a widespread and repeated disturbance. It is not unusual for a

river basin to have multiple dams which effectively fragment the river longitudinally,

resulting in short, isolated river reaches (Ward and Stanford 1995). Furthermore the

operation of dams serves to alter the quantity and timing of water moving through the

river basin, resulting in highly altered flow regimes and physical habitat alterations (NRC

1992; Dynesius and Nilsso 1994; Naiman et al. 1995; Gido et al. 2013). Behavioral and

life-history adaptations to the natural flow regime are documented for many riverine

species including synchronizing life-cycle events (e.g. spawning and egg laying) to flood

pulsing (Lytle and Poff 2004). Fishes that use rising water levels in warmer months as

cues to induce spawning or egg deposition may receive false cues or may never deposit

as a result of regulated flow regimes (Lytle and Poff 2004). Miller et al. (1989) noted a

total of 27 species and 13 subspecies of North American fishes became extinct during the

past century. Fifteen of these species and subspecies were primarily fluvial species from

highly altered systems. Similarly, Anderson et al. (1995) found a marked decline in

relative fish abundance and diversity over a 30-year period after dam construction East

Texas rivers, particularly within fluvial-specialist and migrating taxa (e.g. catastomids,

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cyprinids, ictalurids, and percids) due to longitudinal fragmentation. Some reproductive

guilds, such as pelagic broadcast spawners, seem to be particularly susceptible to

longitudinal habitat fragmentation (Platania and Altenbach 1998; Perkin and Gido 2011).

The negative effects of longitudinal fragmentation in riverine systems are more

immediate than some of the other effects such as a reduction in connectivity to floodplain

habitats.

Altered flow regimes have dramatically diminished connections between rivers

and the off-channel habitats of their floodplains (Poff et al. 1997; Poff and Zimmerman

2010). Reductions in high flow events have also resulted in channelization and other

modifications to channel morphology which can exacerbate the already reduced

connectivity by necessitating higher flows to connect off-channel habitat (Ward and

Stanford 1995). While many fishes in temperate rivers are capable of completing their

life histories while confined to the main channel of the river (Galat and Zweimüller 2001;

Welcomme et al. 2006), there appear to be long-term negative consequences associated

with the loss of access to off-channel habitat due to altered flow regimes for a large

proportion of riverine fishes (Sammons and Macena 2009; Dutterer et al. 2012). For

example, Dutterer et al. (2012) found positive relationships between catch rates of age-0

Spotted Bass Micropterus punctulatus and Spotted Sucker Minytrema melanops and the

occurrence of discharge rates high enough to connect off-channel habitat in the

Apalachicola River, Florida. In years that discharge rates were lower and access to off-

channel habitat was not available, fewer age-0 fishes were caught, suggesting stronger

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year-classes in years with higher discharge rates. Weaker year-classes have been

associated with loss of connectivity to spawning and nursery habitats. Although nursery

habitats for some species of concern have yet to be identified, many are likely dependent

on floodplain habitat, at least partly, to complete their life histories (spawning and egg

deposition). For example, range-wide declines of Alligator Gar Atractosteus spatula have

been partly attributed to loss of access to off-channel spawning and nursery habitats

(Alfaro et al., 2008; Brinkman 2008; Inebnit 2009; Kluender 2011). Though little is

known about Alligator Gar in the earliest life-history stages, their spawning season

coincides with seasonal river pulsing that would connect floodplain habitats in less

modified systems (Simon and Wallus 1989). Additionally, their populations across the

southeastern U.S. have been in decline since the 1980s which coincides with a reduction

in connectivity to floodplain habitat (Etnier and Starnes 1993; Simon and Wallus 1989).

While there has been a general reduction in the connectivity of most altered rivers

with their floodplains (Ward and Stanford 1995), aging of the reservoirs in these altered

systems has resulted in the development of superficially similar nursery habitats at the

river-reservoir interface (RRI). The RRI is an ecotone where there is a gradual transition

from lotic conditions to lentic conditions, including a reduction in current velocity. Large

amounts of sediment are deposited in the RRI as a reservoir ages, building delta-like

formations consisting of off-channel backwater habitats, isolated coves, and drowned

creeks and tributaries (Palmieri et al. 2001). These RRI habitats are by their nature, low

relief, low elevation areas, and therefore require lower discharge rates to remain

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connected to the main channel. In the last 20 years much research has been done on adult

fish assemblages within the RRI (e.g., Carvalho et al.1998; Oliveira et al. 2004;

Kaemingk et al. 2007; Santos et al. 2010; Terra et al. 2010; Yang et al. 2012; Buckmeier

et al. 2013). These studies concluded that the RRI supports high abundance, high species

diversity, high taxonomic richness, and high proportions of fishes occurring in the river-

reservoir ecosystem, relative to river or reservoir segments. Fish assemblages in the RRI

also seem to be highly variable, with seasonal species turnover, suggesting the possibility

that many of the species may only be temporary residents as they move through the RRI

between riverine and reservoir habitats (Buckmeier et al. 2013). Little work has been

done to quantify use of the RRI as spawning or nursery habitats, particularly by

floodplain-dependent riverine species that require lateral connectivity to floodplain

habitat. The more frequent and consistent accessibility of RRI habitats and their

superficial similarity to off-channel floodplain habitats suggest they may have an

important long-term function in maintaining populations of fishes that rely on off-channel

habitats as nursery and spawning habitat.

Clarifying how the RRI is being used by fishes has important conservation

applications, as RRI habitats have been proposed as targets of management action to

preserve fish diversity within altered riverine systems (Buckmeier et al. 2013). The

Trinity River in eastern Texas is a highly altered riverine system that offers the

opportunity to compare the use of floodplain and RRI habitats as nurseries by the fish

assemblage. There are 35 dams within the Trinity River Basin, including Lake Livingston

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which is one of the largest reservoirs in Texas. The RRI between the Trinity River and

Lake Livingston is approximately 34 km and contains numerous backwaters of varying

areas and connection sizes that are superficially similar to off-channel floodplain habitat.

The objectives of this study were to 1) quantify abundance and diversity of larval fishes

in the RRI relative to naturally-occurring off-channel habitats with reduced connectivity

to the main channel 2) examine whether abundance and species composition of the

ichthyoplankton assemblage varies between main channel habitats and off-channel

habitats in the RRI, and 3) evaluate the degree of influence physicochemical

characteristics of off-channel habitats in the RRI and riverine sites have on abundance

and species composition.

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Chapter II

Methods

Study Area

The Trinity River flows approximately 885 km from its headwaters north of the

Dallas-Fort Worth metroplex area southeast towards Houston, eventually emptying into

the Galveston Bay system (Figure 1). The Trinity River supplies a large proportion of the

water used by Dallas-Fort Worth and Houston metropolitan areas, and 34 impoundments

have been constructed in the Trinity River Basin since 1914 to meet the increasing water

demands of these rapidly growing cities (Perkin and Bonner 2011). Most of these

impoundments occur on the tributaries of the Trinity River, as the main channel of the

river is unobstructed within this study area except for an incomplete lock and dam. My

research focused on a portion of the middle Trinity River from Richland Chambers

Reservoir to the Lake Livingston RRI (Figure 1). The middle Trinity River is heavily

channelized with sandy-clay substrates and relatively high discharge (358-29,100 m3s-1).

Lake Livingston, constructed in 1969, meets the water demands of the four surrounding

counties which includes the city of Houston. It is the largest single-purpose reservoir in

Texas and has a large delta-like transition zone, or RRI (Figure 1; C), in its upper reaches

that is typical of reservoirs of similar age and size.

This study encompassed off-channel backwaters and riverine habitats from the

Trinity River near U.S. Highway 287 and FM 488, Big Lake Bottom Wildlife

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Management Area (Figure 1; A & B), and near Riverside, Texas off State Highway 19

(Figure 1; C). Each sampling location was classified as one of four mesohabitat types;

river main channel (RIVMC), river backwater (RIVBW), RRI main channel (RRIMC),

and RRI backwater (RRIBW), and each varied in physical size, complexity, and

physicochemical condition (Table 1).

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Figure 1 The Trinity River, located entirely in Texas, runs from Dallas-Ft. Worth metroplex and discharges

into the Galveston Bay near Houston, Texas. Inset A: Three river backwater sites and the river main channel

site. Inset B: One river backwater site. Inset C: Six river-reservoir interface backwater and one river-reservoir

interface main channel site. Sampling localities were sampled every three weeks from March—July in 2013

and February—June in 2014.

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Table 1 Means of the physicochemical and habitat variables collected for the river backwaters (RIVBW), river main channel (RIVMC), river-reservoir interface

backwaters (RRIBW), and river-reservoir interface main channel (RRIMC) in the Trinity River and Lake Livingston from March—July in 2013 and February—

June in 2014. Area and connection size were measured to determine the ratio of connection size relative to the area of a backwater (RCA). Turbidity (NTU;

nephelometric turbidity units), conductivity (mS/cm; millisiemens per centimeter), temperature (°C), and dissolved oxygen (milligrams/liter) were collected

during each sampling event and a mean is presented here to illustrate the variability in backwater habitats.

Site Area

(ha)

Mean

estimated

connection

size (m)

Perimeter

(m)

Connection

size/area

(RCA)

Mean

turbidity

(NTU)

Mean

cond.

(mS/cm)

Mean

temp.

(°C)

Mean

DO

(mg/L)

River RIVBW9 28.69 - 6750.0 - 19.58 0.28 23.95 8.27

RIVBW12 56.26 - 6307.3 - 32.45 0.33 21.37 10.10

RIVBW13 28.96 - 2484.5 - 12.46 0.26 22.29 16.86

RIVBW14 61.72 - 11988.8 - 9.88 0.72 16.91 7.76

RIVMC - - - - 85.80 0.71 23.03 9.54

RRI RRIBW2 82.02 56 12907.7 6.85E-05 38.40 0.52 23.68 8.73

RRIBW3 162.84 145 19676.2 8.91E-05 36.71 0.44 23.76 10.41

RRIBW4 4.52 12 1094.7 2.66E-04 32.01 0.50 24.05 10.67

RRIBW5 463.32 177 34013.9 3.82E-05 45.55 0.41 23.04 8.69

RRIBW6 44.26 11 5453.3 2.42E-05 66.98 0.45 21.94 9.45

RRIBW7 100.39 32 8045.0 3.22E-05 89.23 0.47 24.39 11.81

RRIMC - - - - 40.79 0.45 23.26 7.55

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River Sites

I sampled four river backwater sites and one river main channel site on the Trinity

River (Figure 1; A & B). Sites were selected to encompass variations in natural

backwater habitats. However, most are not accessible from the river as they do not

maintain a connection to the main channel. Therefore, I was limited to backwaters that

had public access or privately-owned backwaters to which I was given permission to

access. The river main channel site was accessed via public boat ramp at the US-287

highway crossing (Figure 1; A). One riverine backwater (RIVBW14) was only sampled a

total of four times; once in 2013 and three times in 2014 due to gear limitations in heavily

vegetated habitat.

RRI Sites

Six RRI backwater sites (Figure 1; C) were identified and sampled as well as one

RRI main channel site in the southernmost section of the study area. As there was large

variation among backwater habitats in the RRI (Table 1), I selected sites that accounted

for much of this variation. The main channel in the RRI (Figure 1; C) was not as clearly

defined as the main channel in the river sites; however, using the National Hydrography

Dataset (USGS), the thalweg was identified flowing into Lake Livingston and sampling

transects were established in this predefined RRI main channel habitat.

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Sampling Methodology

I sampled larval fishes approximately every three weeks during March—July in

2013 and February—June in 2014 using both a modified push net design (Acre and

Grabowski in press) and quatrefoil light traps. I collected paired samples using two 0.75

x 0.50 x 1.6-m push nets mounted between two jet-propelled kayaks (Mokai

Manufacturing Inc., Newburgh, NY) with a 4.5 x 4.5 x 275-cm aluminum bar. Nets were

constructed using 1000-µm nylon mesh netting. Three 100-m transects were established

haphazardly where water depth was ≥ 0.75 m and obstructions were minimal. Transects

were surveyed each sampling event at a distance of ≤ 5 m to shore, with the exception of

one transect per site across the center of backwater in an attempt to cover most habitat

types available in a given backwater. All main channel transects were located as close to

shore as debris and depth allowed. During each push net sample, flow through each net

was recorded with a Model 2030R standard flowmeter (General Oceanics Inc., Miami,

FL) mounted across the mouth of each net. The duration of each sampling event and GPS

locations at the start and stop of each transect were recorded.

To supplement push net samples, I deployed modified quarter-foil light traps

(Floyd et al. 1984). Traps were constructed from high density polyethylene plastic

bottles, approximately 1750 cm3 in volume. A light source comprised of two amber-

colored waterproof LED lights was mounted internally. Three light traps were deployed

in close proximity to push net transects to encompass similar habitat and species

assemblages. Light traps were deployed for 1.0-6.0 hrs at a depth of 25 cm.

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A suite of physicochemical attributes was recorded at each sampling location.

Dissolved oxygen (mg L-1), conductivity (mS cm-1), and temperature (°C) were recorded

at each site using a YSI Pro2030 Processional Series unit (YSI incorporated, Yellow

Springs, Ohio). Turbidity (NTU) was recorded once at each site during every sampling

event with an Oakton turbidity meter (Oakton Instruments, Vernon Hills, Illinois). Water

temperature data were acquired from HOBO data loggers (Onset Computer Corporation,

Bourne, Massachusetts) placed at each site by Texas Parks and Wildlife Department.

Fish Processing and Identification

Upon capture, all larval fishes were euthanized using a ≥ 250 mg L-1 solution of

tricaine methanesulfonate (MS-222 Western Chemical Inc., Ferndale, Washington),

preserved in ExCell Plus (American MasterTech, Lodi, California), an ethanol-based

tissue fixative, and returned to the laboratory for processing. At the time of this study,

there was no freshwater fish larval fish identification key for the Trinity River Basin

specifically, nor for Texas generally. Therefore, larval fishes were identified to the lowest

taxon possible using Snyder and Seal (2008) and Wallus et al. (1990, 2004, 2006, 2006,

2008; Kay et al. 1994). Larval fishes were photographed against a 1.0 X 1.0 cm grid for

scale using an Infinity 1-2 microscopy camera (Lumenera Corporation, Ottawa, Ontario)

mounted on an Olympus SZX16 stereomicroscope (Olympus Corporation of the

Americas, Center Valley, Pennsylvania). A subsample was selected at random and

measured to the nearest 1.0 mm TL using ImageJ v 1.48 (Rasband 1997-2014). Larval

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fishes were stored in 1-mm glass vials filled with tissue fixative and deposited with the

Texas Natural History Collection in Austin, Texas (accn# 2015-14)

Discharge Data and Estimation of Lateral Connectivity

I estimated connection size and occurrence of backwaters to the main channel of

the Trinity River using a time series of satellite imagery from Google Earth (Google Inc.,

Mountain View, California) in the RRI of Lake Livingston. Images used in Google Earth

were captured on December 31, 2008 and June 4, 2010, from the Texas Orthoimagery

Program. A measurement of connection was taken for each date in the time series and the

mean was used (Table 1).

I used elevation of riverine backwaters, gauge height, and on-site observations (N.

Smith and D. Buckmeier, Texas Parks and Wildlife, personal communication) to

determine when riverine backwater connected to the main stem of the Trinity River. The

closest gage station to the riverine sites is approximately 31 km upstream (USGS gage

08062700 Trinity River at Trinidad, Texas). I used the bottom of channel elevation at

mean seal level at the Trinidad, TX gage (71.8 m) plus the gage height reading provided

by the USGS to estimate surface elevation at Trinidad, TX. I then subtracted the 5.6 m

which is the elevation difference between the Trinidad, TX gage and the spillway’s

confluence with the Trinity River (L. Byers, Richland Chambers Reservoir

Superintendent, personal communication). I then subtracted the elevation of the low-head

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dam in the tailrace of the Richland Chambers Reservoir. The resulting number, if

positive, indicated a connection between the Trinity River and at least one riverine

backwater site.

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Chapter III

Data Analyses

Relative Abundance (CPUE) and Shannon Index (H’)

All statistical analyses were performed using the program SAS v. 9.3 (SAS

Institute Inc., Cary, NC). Transect data was pooled by sampling event and catch per unit

effort (CPUE) and Shannon’s diversity index (Hʹ) were calculated for each sampling

event at each site, with light traps and push net data calculated separately. Catch per unit

effort for push net samples was calculated using the total number of fish captured per

transect and volume sampled per transect. Light trap CPUE was calculated using total

fish captured and time (minutes). Unless otherwise noted, push net data results are

presented as light trap data did not change the conclusions of this research. I used a

logarithmic transformation plus a constant to approximately meet the parametric

assumptions of normality and equality of variance (Guy and Brown 2007). I used a three-

way ANOVA with year (2013 and 2014), habitat (backwater and main channel), and type

(river and RRI) as the independent variables. A pairwise multiple comparison Tukey-

Kramer test was used for post-hoc comparisons.

Canonical Correspondence Analysis

Canonical correspondence analysis (CCA; Legendre and Legendre 1998) was

performed using only push net data to evaluate the influence of relevant environmental

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variables on assemblage composition across sample sites. This multivariate technique

merges multiple regression and ordination techniques and is commonly used to link

species abundance with environmental conditions at the time of sampling. Environmental

and habitat variables were assessed for normality in SAS prior to analyses with a

Kolmogorov-Smirnov test. A log transformation was performed on all data to

approximately meet the parametric assumptions of normality and equality of variance.

Once transformations were applied to all variables, species which were present in < 2%

of push net transects were removed from the CCA. A mean of zero and a standard

deviation of one (µ = 0, = 1) were used to standardize the transformed dataset.

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Chapter IV

Results

Relative Abundance and Species Diversity

I collected 44,029 larvae from the Trinity River and Lake Livingston RRI across

14 sampling events during 2013-2014. Overall, 82% of fishes were captured in the

backwaters of the RRI and 12% in the backwaters of the upper-middle Trinity River and

the remaining 6% were captured in the RRI and river main channels. RRI habitats

generally exhibited higher larval fish abundance and diversity than their riverine

counterparts for both push net transects and light traps (CPUE: F7,377 ≥ 2.26, P ≤ 0.03;

H’: F7,378 ≥ 10.67, P ≤ 0.001; Figure 2). There were no differences observed between

years for relative abundance of fishes, however, diversity between years were different

for both push net and light trap collections (F1,378 ≥ 5.95, P ≤ 0.02; Figure 3). This

relationship was driven mainly by the differences seen across the four mesohabitats

(F1,378 ≥ 3.79, P ≤ 0.05). While the two gear types exhibited similar spatial and temporal

patterns of larval abundance and taxonomic richness and diversity, push net transects

generally captured a larger number of larval fishes per sampling event and greater

taxonomic richness and diversity than light traps set at the same locations (F7,1231 ≥ 48.60,

P ≤ 0.001).

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Figure 2 Two-way ANOVA to analyze mean (± SE) catch per unit effort (CPUE) and Shannon’s Diveristy Index

(H’) for light trap and push net collections in the Trinity River, Texas which were collected every three weeks from

March—July in 2013 and February—June in 2014. The letters above each bar represents the mean seperation

between mesohabitat type; river backwater (RIV BW), river-reservoir interface backwater (RRI BW), river main

channel (RIV MC), and river-reservoir interface main channel (RRI MC). If the letter above the bar is the same then

the mesohabitats were not statistically different for that gear type. Shaded bars represent the riverine sites.

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Figure 3 Mean (±SE) Shannon’s Diveristy Index (H’) for light trap and push net collections in the Trinity River, Texas which were collected every three

weeks from March—July in 2013 and February—June in 2014

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Species Chronology and Richness

A total of 27 taxa were represented in the larval fish samples consisting of 25 that

were identified to the species level, one to genus, and one family-level group that likely

consisted of multiple genera and species. Percids were easily identified to the genus

level; however, a few species of Percina present in the Trinity River have no reliable

keys for larval identification. It is likely that collections of this genus are all Bigscale

Logperch Percina macrolepida, however, historical accounts exist of two other Percina

species (Hendrickson and Cohen 2012) in the Trinity River. Cyprinids were

unidentifiable past the family level due to a lack of larval keys for the species present in

the Trinity River Basin and therefore were treated as a single taxa for analysis.

Regardless of site, taxonomic richness was greater for push nets samples than light traps

samples (F23,1215 = 128.25, P ≤ 0.001). Push nets captured all 27 taxa represented in this

study and nine were unique to the push net samples.

Taxonomic richness varied both spatially and temporally during the study. Inland

Silverside Menidia beryllina and Threadfin Shad Dorosoma petenense were captured at

all sites and tended to be among the first species caught each spring. These two species

were collected throughout the course of each sampling season (Figure 4). Blue Catfish

Ictalurus furcatus, Channel Catfish Ictalurus punctatus, and White Bass Morone

chrysops were the only other species to be captured from all habitat types. However,

these species were only captured sporadically (Figure 4). Centrarchids, such as sunfishes

Lepomis spp., crappies Pomoxis spp., and Largemouth Bass were not encountered in the

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main channel of the river and tended to appear in samples in late spring and early summer

(Figure 4). Spotted Gar Lepisosteus oculatus was the only gar species encountered and

was represented by a single individual taken from the river main channel in 2014.

Catostomids, such as Smallmouth Buffalo and Spotted Sucker, were absent from riverine

main channel and backwater samples in 2013 (Figure 4), but were taken from one

riverine backwater in 2014. Smallmouth Buffalo was collected in both backwater and

main channel RRI habitats in both years; however, the species was captured in greater

numbers in the riverine backwaters (Figure 4).

The timing of species appearances in the samples tended to be later in 2013

relative to that in 2014 (Figure 4) and may have been related to the differences in

temperature and flow regimes between the two years (Figure 5b, d). In general, species

that were collected in both the riverine and RRI sites were collected earlier and for a

longer period than in the riverine sites. Species in the riverine main channel tended to be

first encountered later in the sampling season than the same species in riverine

backwaters or the RRI (Figure 4) and there were only a few taxa that were captured from

the riverine main channel on consecutive sampling events, such as cyprinids, Blue

Catfish, Channel Catfish, and Inland Silverside. A similar pattern was not noted in the

RRI where species were first encountered at the same time for main channel and

backwater sites (Figure 4).

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Figure 4 Timing of species appearance in samples taken from riverine backwaters (RIVBW), riverine main channel (RIVMC), river-reservoir interface

backwaters (RRIBW), and river-reservoir interface main channel (RRIMC) from the Trinity River and Lake Livingston, Texas March—July in 2013 and

February—June in 2014. A solid black bar indicates a species was captured during a sampling event. If a species was captured on non-consecutive

sampling events the time gap between sampling events was colored grey, indicating that the species was presumed to be present during that time. All

blank bars indicate that a species was not captured

Jun Jun

Spotted Gar

Threadfin Shad

Cyprinidae

Smallmouth Buffallo*

Spotted Sucker*

Blue Catfish

Channel Catfish

Tadpole Madtom*

Flathead Catfish*

Inland Silverside

Sheepshead Minnow*

White Bass

Redbreast Sunfish

Green Sunfish

Warmouth

Orangespotted Sunfish

Bluegill

Longear Sunfish

Sunfush species

Largemouth Bass*

White Crappie

Black Crappie*

Bluntnose Darter

Harlequin Darter*

Bigscale Logperch

Percina spp .

Freshwater Drum*

Spotted Gar

Threadfin Shad

Cyprinidae

Smallmouth Buffallo*

Spotted Sucker*

Blue Catfish

Channel Catfish

Tadpole Madtom*

Flathead Catfish*

Inland Silverside

Sheepshead Minnow*

White Bass

Redbreast Sunfish

Green Sunfish

Warmouth

Orangespotted Sunfish

Bluegill

Longear Sunfish

Sunfush species

Largemouth Bass*

White Crappie

Black Crappie*

Bluntnose Darter

Harlequin Darter*

Bigscale Logperch

Percina spp .

Freshwater Drum*

May

RIVMC

2013 2014

RIVBW

RRIBW

2013

RRIMC

2014

Mar Apr May Jun Jul Feb Mar Apr May Mar Apr May Jun Jul Feb Mar Apr

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Figure 5 Larval fish diversity in the Trinity River, Texas March—July in 2013 and February—June in 2014 by

mesohabitat type; river-reservoir interface backwater (RRIBW), river-reservoir interface main channel

(RRIMC), riverine backwater (RIVBW), riverine main channel (RIVMC). Temperature and flow data

downloaded from USGS gage station (USGS Gage 08065350 Trinity River near Crockett, Texas) roughly half

way between the riverine sites and the RRI sites and was chosen to be representative of the study area as a

whole. The vertical dashed line indicates when river discharge was high enough to potentially connect riverine

backwaters. Black dots on panels B and D represent sampling events.

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Larval fish taxonomic richness varied during the spring of 2013 and 2014, but

was consistently higher in the backwaters relative to adjacent main channel habitats

(Figure 5). Taxonomic richness was positively correlated with water temperatures (r ≥

0.53, P ≤ 0.001), but did not exhibit a strong relationship with discharge on the day of

sampling (r ≤ -0.18, P = 0.18). Water temperatures were comparable both years, but

water temperatures at the start of 2014 sampling were cooler and experienced a rapid

drop in early March which appears to coincide with increased species richness in the

riverine backwaters in 2014 compared to 2013 (Figure 5). Taxonomic richness was

greater in the RRI backwaters than any other mesohabitat (F3,50 = 6.26, P ≤ 0.001).

Larval fish taxonomic richness in the backwaters of the river and the RRI peaked prior to

the first flood pulse of 2014. These two hydrologic peaks had the potential to connect at

least one backwater in the riverine portion of the study area and are delineated on the

graphs as a vertical dashed line. A third connection to the riverine backwaters was

identified, however, no sampling occurred after this pulse. Main channel sites tended to

peak in richness post-flood in both years with the exception of the river main channel in

2014. In the riverine backwaters a single sampling event in May of 2014 had a higher

taxonomic richness relative to the other events and was being driven by RIVBW12

(Figure 6c).

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Figure 6 Larval fish diversity in 10 backwater sites sampled in the upper middle (RIVBW…) and the river-reservoir

interface (RRIBW…) of the Trinity River, Texas from March—July in 2013 and February—June in 2014.

Temperature data in the riverine backwaters are daily averages from all four sites. Temperature data for RRI

backwaters are daily averages from six RRI backwaters. The vertical dashed line indicates when river discharge

was high enough to potentially connect riverine backwaters.

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Taxonomic richness was relatively consistent for most of the spring both years

among RRI backwaters, but highly variable in riverine backwaters (Figure 6). The high

taxonomic richness values in riverine backwaters during 2014 were primarily due to one

site, RIVBW12 located in the tailrace of Richland Chambers Reservoir (Figure 6). This

backwater is the only site of the riverine habitats to receive connection during the 2013-

2014 sampling seasons (Figure 5). The RRI backwaters were relatively similar in terms

or taxonomic richness and experienced similar changes in taxonomic richness and

composition through time. Backwater sites in 2013 experienced a peak diversity in early

May and a secondary peak later in the year around July. This secondary peak is due to a

shift in species composition from catastomids, percids, White Bass, and Largemouth Bass

early in the sampling year to Lepomis spp. and Channel Catfish.

Canonical Correspondence Analysis

Canonical correspondence analysis indicated that there were three major divisions

amongst sites based on larval fish assemblage structure and physicochemical

characteristics: the RRI (backwaters and main channel), riverine backwaters, and riverine

main channel (Figure 7). The sample sites were primarily separated along the first

canonical axis (Table 3) which was strongly associated with turbidity and conductivity

and, to a lesser extent, temperature (Table 4). The first canonical axis had the greatest

explanatory power (Table 3) and further analysis of results from the first canonical

dimension suggest there was a difference in the scores along the first canonical

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dimension among sites (F11,110 = 35.94, P ≤ 0.001), indicating that the strongest driver to

these groupings is their differences in physicochemical properties and to a lesser extent

the composition of their larval fish assemblages (Table 4). In addition to the RRI main

channel, one of the riverine backwater sites (RIVBW14) grouped closely with the RRI

backwaters. Mean conductivity in RIVBW14 was greater than any other sampling

locality, but the site had lower turbidity and temperature than all other sites (Table 1).

However, this site was underrepresented in my samples as it was only sampled early in

the 2013 and 2014 seasons.

The second canonical axis was dominated by the relative abundance of various

fish species (Table 4). However, this axis explained only about 11.8% of the variance and

was not significant (Table 4) despite the habitat types exhibiting different mean scores

(F12,109 = 148.17, P ≤ 0.001). Abundance and occurrences of species varied across sites

and samples. The riverine habitats, particularly the main channel, exhibited relatively

depauperate larval fish assemblages compared to the RRI habitats (Figure 4); however,

the relationships between sites are primarily driven by conductivity, turbidity and to a

lesser extent temperature.

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Figure 7 Canonical correspondence analysis linking species composition collected in the river backwaters

(RIVBW), river main channel (RIVMC), river-reservoir interface main channel (RRIMC), and river-reservoir

interface backwaters (RRIBW) in March—July in 2013 and February—June in 2014 with physicochemical

variables from the Trinity River and Lake Livingston, Texas. Species that occurred in at least 2% of samples

were used for analyses. The length of each vector indicates the strength of correlation between that variable

and species composition. As the length of the line increases as does the strength of correlation. The direction

of the arrows on axes indicate when a particular species, in relation to species composition and relative

abundance among sites, is most likely to be captured. The Can_1 axis explained 86.6% of the variance with an

eigenvalue of 1.99 and the Can_2 axis described 11.8% of the variance with an eigenvalue of 0.27.

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Table 2 Canonical correlation analysis results from push net transects of fish assemblage data collected from 12 sites in

the Trinity River and Lake Livingston, Texas March—July in 2013 and February—June in 2014.

Can Canonical

correlation

Variance

explained F df 1 df 2 P

1 0.816 0.866 4.04 45 310 <

0.0001

2 0.462 0.118 1.11 28 210 0.33

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Table 3 Standardized canonical discriminant coefficients for variables used in canonical correlation analysis of the

Trinity River and Lake Livingston larval fish assemblages from push net transects, March—July in 2013 and

February—June in 2014.

Variable Can1 Can2

White Crappie -0.035 -0.110

Orangespotted Sunfish -0.066 0.249

Bluegill 0.188 0.338

Redbreast Sunfish -0.307 -0.246

Longear Sunfish 0.133 0.058

Channel Catfish -0.089 -0.475

Smallmouth Buffalo 0.108 0.637

Threadfin Shad -0.174 0.338

Inland Silverside 0.008 0.451

White Bass 0.170 0.042

Cyprinidae -0.194 -0.195

Freshwater Drum 0.020 0.168

Turbidity 0.800 0.153

Cond 0.951 -0.194

Temp 0.348 -0.153

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Chapter V

Discussion

The RRI may contain the most diverse and productive habitats in a river-reservoir

system in terms of adult fish assemblages (Carvalho et al.1998; Oliveira et al. 2004;

Kaemingk et al. 2007; Santos et al. 2010; Terra et al. 2010; Yang et al. 2012; Buckmeier

et al. 2013). My results demonstrate a similar pattern exists for larval fishes. Larval fish

diversity, richness, and relative abundance were greater in the both the RRI backwaters

and RRI main channel than in their counterparts in the riverine habitats. Furthermore,

RRI habitats, both main channel and backwater, were distinct from riverine backwaters

and the riverine main channel in terms of larval fish assemblage structure and

physicochemical conditions. Overall, RRI habitats may serve as an important surrogate

nursery habitat for riverine fishes, particularly for floodplain-dependent species, when

there is a lack of connectivity between the main river channel and floodplain habitats.

Relative Abundance

Lateral connectivity between the river channel and off-channel floodplain habitats

is important in maintaining species abundance and diversity of riverine fishes (Junk et al.

1989; Ward et al. 1999). For larval fishes, floodplain habitats typically have a higher

density of prey species, lower current velocities, and lower predation risk than habitats in

the river channel (Balcombe et al. 2005). However, anthropogenic modifications to river

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basins, such as dams, reduce the frequency, duration, and predictability of lateral

connectivity to floodplain habitats (Ward and Stanford 1995; Ward 1998; Bunn and

Arthington 2002) and thus have the potential to alter fish recruitment processes and

assemblage structure. In this particular study, riverine backwaters from the Trinity River

were largely isolated from the main channel with the exception of one backwater

(RIVBW12) and this is the only documented connection to floodplain habitats of the sites

sampled. Riverine backwaters in the Trinity River had depressed larval abundances

relative to those in the RRI and the difference in the accessibility of the habitats to the

main river channel is potentially an important factor driving the observed differences in

assemblage structure (Gibbons and Gee 1972; Werner and Hall 1976; Werneret al. 1977;

Tallman and Gee 1982; Schlosser and Toth 1984). Connectivity of lateral floodplain to

the main channel aids in the transport of nutrients essential in maintaining stable fish

populations and can be a limiting factor to floodplain productivity in times of extended

isolation (Junk et al. 1989). In contrast to riverine backwaters, RRI backwaters remained

connected to the main channel throughout the course of this study which likely aided in

nutrient transfer between main channel and backwaters and may have contributed to the

greater larval abundances collected. Overall, our estimates of the relative abundances of

the species encountered were consistent with other surveys for adult fishes in RRI

habitats (Oliveira et al. 2004; Santos et al. 2010; Terra et al. 2010).

The RRI backwaters vary greatly in the size of their connection to the main

channel of the RRI relative to their area (RCA; Table 1), which may be an abiotic factor

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contributing to the high abundance of larval fishes within them. There are several

potential explanations for why connection size is an important in determining the

abundance and diversity of the larval fish assemblage. The larvae of many marine fishes

can select their habitats once they have developed beyond the post-yolk sac larvae stage

(Leis 2006). Post-yolk sac larvae in freshwater systems may exhibit similar behavioral

patterns and the RCA value may be influencing an increase in the abundance of most

larvae captured during this study. Therefore, it is possible that a larger connection size

may allow more larvae to find a backwater while the smaller area increases my ability to

detect it. Conversely, the smaller connection size decreases the chances larvae will move

into a backwater, and the increased area allows for greater diffusion and lowers detection

probability. Additionally, most larval fish have limited locomotive function and the

method leading their distribution in large rivers at the broad scale should be dominated by

passive means (Bertolo et al. 2012). If larvae are mostly dispersing under passive means

the larger connection size would enable a greater abundance of fishes to be swept into a

backwater in the RRI. It is also possible that assemblages are comprised of permanent

adult residents and many generations live out the entirety of their lives in the RRI

backwaters. However, it is more likely that the RCA value has more of an effect for adult

fishes that are moving throughout the main channel searching for spawning grounds and

locations for egg deposition than yolk-sac larvae actively seeking out backwaters.

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Species Diversity and Richness

A total of 78 native species and six non-native fishes have been reported from the

Trinity River Basin (Hendrickson and Cohen 2012), of which at least 27 were captured in

this study. The cyprinid family is of particular interest, because this family potentially

represents 21 of the species reported from the Trinity River Basin and could alter our

analysis significantly if parsed to the species level. Cyprinids may have had several

independent occurrences based on their sporadic appearances in collection. This may

indicate multiple species at different times using these mesohabitats which would

corroborate similar finding in the RRI of the Colorado River, Texas (Buckmeier et al.

2013). However, with the current identifications, diversity of larval fishes collected were

greater in the RRI habitats compared to their counterparts in the riverine sites.

Taxonomic richness varied amongst the sites and was higher in the backwaters

relative to the adjacent main channel habitats. Taxonomic richness was also positively

correlated with temperature, but did not exhibit a clear relationship with discharge.

Richness and diversity patterns observed in the riverine backwaters seem to be

disproportionally driven by this high taxonomic richness and diversity in the tailrace of

Richard Chambers Dam (RIVBW12). This site is unique compared to the other riverine

backwaters because it maintained a flow of approximately 1 m3 s-1 in the duration of the

study (L. Byers personal communication.) and is impounded by a low-head dam before it

enters into the Trinity River. Fish populations in this site are likely isolated for much

shorter periods of time than fishes in the other riverine backwaters. It is also possible that

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fish passage over the low-head dam could have occurred three times, during the sampling

periods, from 2013-2014 contributing to the diversity and richness seen in this particular

riverine backwater which appears to be functioning, in terms of larval fish assemblage,

similarly to RRI habitats.

Previous research has shown that the RRI may be the most species rich and

diverse ecotone of the river-reservoir ecosystem (Kaemingk et al. 2007; Betsill 2012,

Buckmeier et al. 2013), and my results supports these findings. However, the appearance

of Spotted Sucker and the increased abundance of Smallmouth Buffalo in the riverine

habitats suggests the RRI may not be a substitute for riverine backwaters for all riverine

fishes particularly species with more specific spawning requirements. Spotted Sucker

spawn in rock and gravel riffles above pools and have semi-buoyant eggs (Kay et al.

1994) which may also contribute to a low detection rate as my gear was designed to

sample the top 0.5-m of the water column. Smallmouth buffalo have similar spawning

requirements but typically deposit their eggs over freshly inundated floodplains which in

turn may contribute to their higher detection rate relative to Spotted Sucker. Additionally,

even common species of gar in the Trinity River, such as Spotted Gar, were not captured

with the exception of a single specimen from the main channel of the Trinity River. Gar,

in their early life history stages, are attached to plants and detritus and then likely move

into shallow habitats (Alfaro et al. 2008) where our push nets cannot sample.

Year Effect

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The timing of species appearance in samples was delayed for most species in

2014 relative to 2013. There was also a reduction in abundance observed across most

sites in 2014 which coincides with a precipitous drop in water temperatures in early

March. Reduced abundance of dominant larval ichthyofauna, such as Threadfin Shad, can

decrease competition for resources and result in increased survival rates for less common

ichthyofauna (Byström and Garcia-Berthou 1999; Welker et al. 1994). It is possible that

the later appearance of Threadfin Shad in 2014 reduced competition and contributed to

the first time appearance of Spotted Sucker and the increased abundance of Smallmouth

Buffalo in the riverine backwaters. Both species were captured mostly in RIVBW12, a

completely artificial spillway, and a single Spotted Sucker specimen captured in a large

backwater in the RRI during the same sampling event. The spillway (RIVBW12)

maintains a flow into the main channel of the Trinity throughout the year, though adult

fish are unlikely to make the passage over the low-head dam at the base into the

backwater during lower flows. However, the connection does allow for nutrient transfer

and displayed similar physicochemical characteristics as RRI backwaters (Table 1).

Conclusion and Management Implications

Overall, the backwaters in the RRI appear to be acting as nursery habitat for many

fishes of the Trinity River in times when naturally-occurring backwaters lack

connectivity. Whether RRI species assemblages are comprised mostly of permanent

residents or if these assemblages are dynamic groups with individuals and taxa coming

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and going in different stages of their life-history cycle is unclear. It is apparent, however,

that the RRI may be important for diversity, richness and abundance for many fishes, but

there was a distinct lack of floodplain-dependent species, particularly Alligator Gar and

Spotted Sucker. The absence of these floodplain-dependent species may indicate that the

RRI may not be a substitute for natural connections to floodplain habitats. A more

targeted effort for specific obligate-floodplain species to determine if it was bias in our

sampling methodology given their early life-history strategies or that these species only

exist in low numbers is needed to determine if the obligate floodplain-species are using

RRI habitats or if there is no legitimate substitute for natural flood pulsing that connects

floodplain habitats. While it may be clear that the RRI is a more productive system than

its riverine counterparts during drier years, an extended study is needed to elucidate the

interactions of less common species and those fishes of conservation need. For example,

the RRI backwaters share connectivity to the main channel and thus share the same

potential pool of species, but I did not observe the same densities, relative abundance, or

assemblage structure across all sites. Research directed at connectivity size, duration, and

distance to main channel would be helpful in the management of riverine fish. My data

suggest that the RRI habitats are important for maintaining abundance of fish populations

but may not be the solution for diversity. Though the RRI may be important in drought

years it is unlikely to be a perfect substitute for natural flood pulsing.

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Appendix

Table A.1 Mean (±SE) CPUE and H’ for larval fishes captured in 2013 and 2014 from the Trinity River, Texas by

site. The riverine sites from the middle Trinity River represented by the river backwaters (RIVBW) and the river

main channel (RIVMC), and the river-reservoir interface (RRI) sites are represented by the RRI backwaters

(RRIBW), and the RRI main channel (RRIMC).

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Table A.2 Canonical correlation analysis coefficients for larval fishes and habitat variables collected from the Trinity

River, Texas March—July in 2013 and February—June in 2014.

Can_1 Can_2

Correlation

Coefficient

Prob > |r|

under H0:

Rho=0

Correlation

Coefficient

Prob > |r|

under H0:

Rho=0

POMANN -0.14 0.14 -0.15 0.11

LEPHUM 0.05 0.59 0.17 0.07

LEPMAC 0.06 0.53 0.35 <.0001

LAPAUR 0.08 0.37 0.38 <.0001

LEPMEG 0.02 0.82 0.21 0.02

ICTPUN 0.24 0.01 -0.41 <.0001

ICTBUB 0.12 0.20 0.63 <.0001

DORPEN 0.06 0.55 0.31 0.00

MENBER 0.09 0.34 0.45 <.0001

MORCHR 0.04 0.66 0.21 0.02

CYPRINIDAE -0.21 0.02 -0.18 0.05

APLGRU 0.04 0.68 0.18 0.05

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Table A.3 Taxonomic richness and mean species richness ± SD of push net (PN) and light trap (LT) samples taken

from riverine backwaters (RIVBW), riverine main channel (RIVMC), river-reservoir interface backwaters (RRIBW),

and river-reservoir interface main channel (RRIMC) from the Trinity River and Lake Livingston, Texas March—July

in 2013 and February—June in 2014.

Mesohabitat Gear

Species

Count

Mean ± SD

RIVBW PN 22 0.77 ± 1.04

LT 7 0.16 ± 0.48

RIVMC PN 8 0.48 ± 0.80

LT 2 0.10 ± 0.31

RRIBW PN 23 1.70 ± 1.38

LT 14 0.63 ±1.10

RRIMC PN 16 1.30 ±1.23

LT 10 0.78 ± 0.99

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Table A.4 Fish collected in the Trinity River, Texas March—July in 2013 and February—June in 2014 by site and year. An ‘x’ signifies a species

was captured at that site and a blank space indicates that the species was not captured.

2013 2014 2013 2014 2013 2014 2013 2014 2013 2014 2013 2014 2013 2014 2013 2014 2013 2014 2013 2014 2013 2014 2013 2014

Spotted Gar x

Threadfin Shad x x x x x x x x x x x x x x x x x x x x x x

Cyprinidae x x x x x x x x x x x x x x x x x x x x x

Smallmouth Buffallo x x x x x x x x x

Spotted Sucker* x x x x

Blue Catfish x x x x x x

Channel Catfish x x x x x x x x x

Tadpole Madtom x

Flathead Catfish x

Inland Silverside x x x x x x x x x x x x x x x x x x x x x x x

Sheepshead Minnow x x

White Bass x x x x x x x x x x x x x x x x x

Redbreast Sunfish x x x x x x

Green Sunfish x x x x x x

Warmouth x x x x x

Orangespotted Sunfish x x x x x x x x x x x x x x x x

Bluegill x x x x x x x x x x x x x x x x

Longear Sunfish x x x x x x x x x x x

Sunfush species x x x x x

Largemouth Bass x x x x

White Crappie x x x x x x x x x

Black Crappie x

Bluntnose Darter x x x x x x

Harlequin Darter x

Bigscale Logperch x x x x x x

Percina spp . x x x

Freshwater Drum x x x x x x x x x

RRIBW3 RRIBW4 RRIBW5 RRIBW6 RRIBW7 RRIMCRIVBW9 RIVBW12 RIVBW13 RIVBW14 RIVMC RRIBW2

RRIRiver