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Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State University
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Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Dec 28, 2015

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Page 1: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Mass Marking and Mark-Selective Fisheries

Black and White Choice, or Complex Shades of Grey?

David HankinDepartment of Fisheries Biology

Humboldt State University

Page 2: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Background Perspective (DGH)• Hatchery Reform Efforts are to be Commended

and are Especially Needed at CV Hatcheries (Hankin 1982, Asilomar conference).

• Mass Marking (MM = 100% AD-clip + some smaller fraction with CWT) is not clearly a “hatchery reform” measure.

• It’s hard to imagine implementation of MM (as defined above) without Mark-Selective Fisheries (MSF).

• MM & MSF raise very serious issues.• Other CV hatchery reform efforts seem much

more critical (e.g., eliminate off-site releases – Klamath vs CV fall Chinook genetic differences among stocks; reconsider “random mating”)

Page 3: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Coordination of Presentations

• Hankin (HSU): Overview of hatchery marking programs; Intention of MM; serious issues raised by MM & MSF (PSC Expert Panel); DIT?; Estimation vs “Imputation”

• O’Farrell (NMFS/PFMC) - MM&MSF Assessment and Management Issues; ESA-listed stocks; “Disaster Prevention?”

• Phillips (CDFG) – Logistics, costs and feasibility of recovery programs under MM & MSF

Page 4: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Historical Perspective on Hatchery Marking Programs for Chinook Salmon• Individual groups of fish were tagged (fin clips)

primarily to assess relative performance of different rearing and release strategies.

• No serious attempts or apparent interest in marking to allow identification of hatchery fish or separation of wild from hatchery fish.

• High variability in marking programs across years within hatcheries and across hatcheries; generally impossible to reliably estimate hatchery contribution to returns.

Page 5: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Development of Coded-Wire Tags• In mid-70’s, AD-CWT

combination, combined with rigorous ocean and freshwater escapement sampling programs (e.g., Klamath R.) allowed cohort reconstruction/analysis.

• Cohort Analysis: Fishery exploitation rate analysis; survival rates; maturation rates; but not hatchery contribution due to variability in marking levels.

Page 6: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

By 2004: CWT System Summary statistics (Johnson, K. 2004) • 54 state, federal, tribal and private entities in

USA and Canada conduct CWT experiments – 1200 new codes annually;

• > 50 million juvenile salmon and steelhead tagged annually (cost > $7.5 million);

• About 275,000 CWTs recovered each year (cost $12-13 million);

• Used for many purposes – evaluate success of hatchery practices; ocean distributions; serve as proxy for fishery impacts on unmarked wild fish

Page 7: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Key Assumptions and Requirements of Coastwide CWT Recovery Program

• Adipose fin clip sequestered as a mark to be used ONLY for presence of CWT

• Indicator Stock Idea: Fate (fishery impacts) of hatchery fish with AD+CWT assumed to be same as that of “nearby” wild population with similar life history, run timing

• AD+CWT releases were not designed to allow estimation of overall contribution of hatchery fish to escapement → % Hatchery fish unknown.

Page 8: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Key Advantage of CWT Releases

• “Enrichment” of small populations in ocean catch sampling:– Assuming equal survival of two 200,000 fish

release groups, expected ocean catches of CWT’d fish should be similar even when size of populations from which CWT groups originated may differ by order of magnitude

– Very advantageous for assessment of small natural populations (assuming appropriate proxy). Example: Sacto winter Chinook.

NOTE – MM (100% AD-clip) eliminates “enrichment”.

Page 9: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

CV Fall Chinook Hatchery AD+CWT Marking Programs circa 2000

Hatchery Prod. Goals (Mil)

Size at Release

Release Locations

% Tagged

BY %

Merced 0.96 smolts/

or

0.30 year.

70-90/lb

6-10/lb

Merced;

San Joaquin

1997 63

1996 97

1994 43

Moke. 3.25 smolts

1.5 year.

2.0 ocean

40-75/lb

5-8/lb

25-30/lb

Moke. R.

SF Bay

1997 17

1998 11

1995 13

Feather 6.0 smolts

2.0 ocean

40-60/lb

25-30/lb

Pri. SF Bay

SF Bay

1997 32

1996 11

Nimbus 4.0 smolts 40-60/lb SF Bay 1996 0

Coleman 12.0 smolts 60-80 mm Pri. Battle Ck.

1997 08

1998 08

Page 10: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Reliable Estimation of the Proportion of Hatchery Fish in Spawning Runs: Constant Fractional Marking (Hankin 1982)

• Allow existing AD+CWT programs to continue.

• Mark a constant fraction of remaining “production” releases with fin clip.

• c=1/(fraction marked)

n

xcxp fcad

ˆ

Page 11: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Implementations of CFM

• 1979-1982 BYs: Iron Gate and Trinity River hatcheries (Klamath system) – fin-clip 1/3 of all releases in excess of AD+CWT (Hankin 1982);

• 1999 BY – present: Trinity River Hatchery – 25% of all releases receive AD+CWT (Hankin & Newman 1999);

• 2007 BY– present: CV hatcheries – 25% of all releases in excess of “experimental” CWT groups receive AD+CWT (Hicks, Newman and Hankin 2005)

Page 12: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Trinity R. Chinook – Willow Creek Weir 2008

Julian Grilse Adults

week Inclusive dates Total Ads Total Ads

34 20-Aug 26-Aug 120 1 81 4

35 27-Aug 2-Sep 132 1 64 2

36 3-Sep 9-Sep 203 5 87 3

37 10-Sep 16-Sep 282 9 170 14

38 17-Sep 23-Sep 126 5 122 12

39 24-Sep 30-Sep 143 8 146 25

40 1-Oct 7-Oct 39 4 77 12

41 8-Oct 14-Oct 17 1 47 6

42 15-Oct 21-Oct 27 2 84 14

43 22-Oct 28-Oct 18 0 39 4

44 29-Oct 4-Nov 9 0 89 15

2008 Totals: 1,134 36 1,009 111

Page 13: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Purposes of 100% Marking• Historical: Provide fishing opportunities on

hatchery fish (e.g., steelhead) while reducing impacts on wild fish: N. Umpqua, OR steelhead - “If he’s wild, let him go”.

Page 14: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Other Purposes of 100% Marking

• Contemporary theme –– To allow control of % hatchery fish among

hatchery spawners and among naturally spawning fish in an integrated hatchery/natural population system (HSRG 2004)

– Note: Implicitly assumes on-site releases of hatchery fish (to reduce straying across populations) and system of weirs or similar structures to allow separation of types on natural spawning grounds. Is that likely in the CV in the near future???

Page 15: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Mass Marking and Mark-Selective Fisheries: Implementation for Pacific Salmon

• In current mass marking procedures, ALL hatchery fish receive an adipose fin clip, but many (most) of these fish are released without CWTs:

• (Norm Dicks, D-Wash, 2003): “The United States Fish and Wildlife Service shall, in carrying out its responsibilities to protect threatened and endangered species of salmon, implement a system of mass marking of salmonid stocks, intended for harvest, that are released from Federally operated or Federally financed hatcheries including but not limited to fish releases of coho, chinook, and steelhead species. Marked fish must have a visible mark that can be readily identified by commercial and recreational fishers."

Page 16: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Achieving mass marking has required development of new (and expensive) automated tagging technologies:

AutoFish system from Northwest Marine Technology is capable of automated removal of the adipose fin and/or insertion of a CWT. Each fish is sorted by size, clipped and/or tagged, and returned to the pond in about 5 seconds.

Page 17: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Mass Marking also introduces new complications wrt sampling catches and escapements for CWT’d fish because now not all ad-clipped fish have CWT and it would be foolish to collect heads from all AD-clipped fish to search for non-existent CWTs.

Tube (left) and Wand (right) CWT detectors

Page 18: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

More complications from MM and MSF

• In mark-selective fisheries (MSF), only ad-clipped (known hatchery) fish may be retained, theoretically leading to reduced fishing mortality on weak (e.g.ESA-listed) natural stocks.– BUT: there must also be some ”non-catch” hook &

release mortality on unmarked (natural) fish in MSF. – Recovery patterns of CWT’d hatchery indicator

stocks have routinely been used to infer exploitation rates experienced by associated natural stocks.

– BUT: with MSF, recovery patterns of marked hatchery fish are no longer the same as for the associated unmarked natural stocks.

Page 19: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

PSC Expert Panel Findings (2005)

• 6. Mass Marking (MM) and Mark-Selective Fisheries (MSF) together pose serious threats to the integrity of the CWT system. The PSC has been alerted to these threats since at least 1991. In particular:A. Recovery patterns of adipose-clipped fish no longer indicate recovery patterns for unmarked natural stocks (see O’Farrell talk); B. Significant practical and statistical issues are raised by the need to find Ad+CWT fish when many MM fish are released with Ad clip only. (see Phillips talk)

Page 20: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

These Concerns are not new

• 1991 letter to Director General, Pacific Region, and Director (WFDW) noted 7 different significant issues (problems) that were raised by MM and MSF. (See EP Report)

• Letter was sent by Co-Chairs of PSC’s CTC (Chinook Technical Committee:Jim Scott (WDFW), Norma Sands (US), Brian Riddell (DFO)

Page 21: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

DIT to the Rescue???Double Index Tagging: Two groups receive

CWT, but only one group is AD-clipped.

Observable and Unobservable Mortalities of DIT Groups

Observable and Unobservable Mortalities of DIT Groups

MARKED

UNMARKED

NSF MSF

???

Escapement

++=

++=

Page 22: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

PSC Expert Panel Findings (2005)

• 7. For coho and Chinook salmon, it appears possible to estimate total non-catch mortalities at age in all MSFs from a full cohort analysis of paired DIT (double-index tagged) releases, IF complete recovery data can be collected for DIT groups.

However, we could not derive an unbiased method to allocate total non-catch mortalities over a set of MSFs. It is therefore impossible to guess where and when non-catch impacts take place.

Page 23: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Hankin’s Main Concern

• In the absence of successfully executed DIT experiments (there have been none so far for Chinook of which I am aware – see Expert Panel report), non-catch mortalities to natural stocks would have to be “imputed” based on a sequence of suppositions and assumptions. This is not equivalent to estimation from observed data!

Page 24: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

Imputation Vs Estimation: What’s the Difference?

• Imputed Non-Catch Mortalities:

- Assume (i.e., “make up”):• Known contact rate• Known shaker mortality rates (sport vs comm.)• Independence of mortality if multiple releases of

same fish

• Estimated N-C M (i.e., let data speak):– Statistical analysis of recovery data (for DIT

groups?)

Page 25: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

An Extreme Example of “Imputation”• Guessing the probability of a nuclear plant

meltdown (as in guessing non-landed mortalities in MSF):– Assume that all events leading to a meltdown are

statistically independent of one another → meltdown is highly improbable; vs

– But, what if events are not independent, but one failure causes other failure events to be more likely → not so improbable

• Frequentist approach (based on observed metdowns) is unsuitable for meltdowns (i.e., wait for meltdowns?), but is feasible for fish! Guessing is not acceptable if there is a better way.

Page 26: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

MM: Asking the Hard Questions

• Q. If the purpose of MM is not to support MSF, but to support “hatchery reform”, then why remove AD fins from all fish?

• A. Removal of AD fin is not needed to develop integrated hatchery programs. Instead, say, 25% could be AD+CWT for assessment purposes and remaining unmarked fish could receive blank wire. On return to FW, tubes (hatcheries) and wands (weirs) could be used to separate wild from hatchery fish (M. Mohr).

Page 27: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

MM&MSF: Asking the Hard Questions

• Observation: For a number of reasons, especially for commercial fisheries, MSF only makes sense, theoretically, when there is a high proportion of tagged fish among those likely to be contacted by a fishery (say, > 70%). (Commercial fishermen have formally complained about MSF in PSC ocean fisheries with low mark rates.)

Page 28: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

• Follow-up Q. For CV Chinook, what kind of future

ocean contribution do we want to see from naturally produced as compared to hatchery fish?

Does it make sense to promote a fishery type that makes no sense in the context of the future that we would like to see?

How easy would it be to stop a large-scale implementation of MSF in Central CA ocean fisheries once it had started?

Page 29: Mass Marking and Mark- Selective Fisheries Black and White Choice, or Complex Shades of Grey? David Hankin Department of Fisheries Biology Humboldt State.

THE END