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Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST
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Page 1: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Linear vs. Nonlinear

Jaeseung Jeong, Ph.D

Department of Bio and Brain Engineering,KAIST

Page 2: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Chaos

1. the formless shape of matter that is

alleged to have existed before the

Universe was given order.

2. complete confusion or disorder.

3. Physics; a state of disorder and irregularity

that is an intermediate stage between

highly ordered motion and entirely

random motion.

Nonlinear dynamics and Chaos

: the tiniest change in the initial conditions

produces a very different outcome, even when

the governing equations are known exactly

- neither predictable nor repeatable

Page 3: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

• 800 BC, Greek “χaos” – complete absence of order

• Aspect of chaos

(1) Isaac Newton (1642 – 1727)

“get headaches contemplation the three-body gravitational problem such as

Sun, Moon, and Earth

Nonlinear dynamics and Chaos

Page 4: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Nonlinear dynamics and Chaos

• Hadamard and Duhem

They were interested in the movement of a ball on a negatively curved surface and on the failure to predict its trajectory due to the lack of knowledge of its initial condition.

Page 5: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

(2) King Oscar II (1829 – 1907)

offered a prize of 2500 crowns

to anyone solve the n-body problem

stability of the Solar System

Nonlinear dynamics and Chaos

Page 6: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

• N-body problem

The classical n-body problem is that

given the initial positions and velocities

of a certain number (n) of objects that

attract one another by gravity, one has

to determine their configuration at any

time in the future..

Nonlinear dynamics and Chaos

Page 7: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

(3) Jules Henri Poincarè (1854 – 1912)

Won the Oscar II’s contest,

not for solving the problem, but for showing that even the three-body problem was impossible to solve. (over 200 pages )

Nonlinear dynamics and Chaos

“…it may happen that small differences in the initial conditions produce very great ones in the final phenomena. A small error in the former will produce an enormous error in the latter. Prediction becomes impossible, and we have the fortuitous phenomenon” - in a 1903, essay "Science and Method"

Page 8: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

• N-body problem

This problem arose due to a

deterministic way of thought, in which

people thought they could predict into

the future provided they are given

sufficient information. However, this

turned out to be false, as demonstrated

by Chaos Theory.

Nonlinear dynamics and Chaos

Page 9: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Nonlinear dynamics and Chaos

Page 10: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Nonlinear dynamics and Chaos

Systems behaving in this manner are now called “chaotic.”

They are essentially nonlinear, indicating that initial errors in measurements do not remain constant, rather they grow and decay nonlinearly (usually exponentially) with time.

Since prediction becomes impossible, these systems can appear to be irregular, but this randomness is only apparent because the origin of their irregularities is different: they are intrinsic, rather than due to external influences.

Page 11: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

What is chaos?

• The meteorologist E. Lorenz He modeled atmospheric convection in terms of three

differential equations and described their extreme sensitivity to the starting values used for their calculations.

• The meteorologist R May He showed that even simple systems (in this case

interacting populations) could display very “complicated and disordered” behavior.

• D. Ruelle and F. Takens They related the still mysterious turbulence of fluids to

chaos and were the first to use the name ‘strange attractors.’

Page 12: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Nonlinear dynamics and Chaos

Lorenz attractor

Page 13: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Nonlinear dynamics and Chaos

Page 14: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

The Logistic equation

• Xn+1=AXn(1-Xn)

Page 15: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

The Logistic equations

Page 16: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

R

Page 17: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

• Laminar(regular) / Turbulent(chaotic)

• Turbulent of gas flows

Nonlinear dynamics and Chaos

Page 18: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

• High flow rate : Laminar Turbulent

Department of BioSystems

Nonlinear dynamics and Chaos

Page 19: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

What is Chaos?

• M Feigenbaum He revealed patterns in chaotic behavior by

showing how the quadratic map switches from one state to another via periodic doubling.

• TY Li and J Yorke They introduced the term ‘chaos’ during

their analysis of the same map.

• A. Kolmogorov and YG Sinai They characterized the properties of chaos

and its relations with probabilistic laws and information theory.

Page 20: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

• Taffy – pulling machine

Nonlinear dynamics and Chaos

Page 21: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Nonlinear dynamics and Chaos

• The strength of science It lies in its ability to trace causal relations and so to predict

future events.

• Newtonian Physics Once the laws of gravity were known, it became possible to

anticipate accurately eclipses thousand years in advance.

• Determinism is predictability The fate of a deterministic system is predictable

• This equivalence arose from a mathematical truth: Deterministic systems are specified by differential equations that

make no reference to chance and follow a unique path.

Page 22: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Chaos systems

• Newtonian deterministic systems

(Deterministic, Predictable)

• Probabilistic systems

(Non-deterministic, Unpredictable)

• Chaotic systems

(Deterministic, Unpredictable)

Page 23: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Fractal

As a non-fractal object is magnified, no new features are revealed.

As a fractal object is magnified, ever finer features are revealed. A fractal object has features over a broad range of sizes.

Self-similarity

The magnified piece of an object is an exact copy of the whole object.

Page 24: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Fractal measure : Scaling law or power law

Scaling: The value measured of a property, such as length,

surface area, or volume, depends on the resolution used to

make the measurement is called the scaling relationship.

The simplest form of the scaling

relationship is that the measured

value of a property Q(r) depends

on the resolution used to make

the measurement with the

equation: Q(r)=Brb (B and b are

constants). This form is called a

power law.

Log Q(r)

Log r

Page 25: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Fractal – Self-similarity

Page 26: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.
Page 27: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Fractal Art

Page 28: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Fractal music

Page 29: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Dynamical system and State space

• A dynamical system is a model that determines the evolution of a system given only the initial state, which implies that these systems posses memory.

• The state space is a mathematical and abstract construct, with orthogonal coordinate directions representing each of the variables needed to specify the instantaneous stae of the system such as velocity and position

• Plotting the numerical values of all the variables at a given time provides a description of the state of the system at that time. Its dynamics or evolution is indicated by tracing a path, or trajectory, in that same space.

• A remarkable feature of the phase space is its ability to represent a complex behavior in a geometric and therefore comprehensible form (Faure and Korn, 2001).

Page 30: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Phase space and attractor

Page 31: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Phase space and attractor

Page 32: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

For any phenomena, they can all be modeled as a system governed by a consistent set of laws that determine the evolution over time, i.e. the dynamics of the systems.

Page 33: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Linear vs. NonlinearConservative vs. DissipativeDeterministic vs. Stochastic

• A dynamical system is linear if all the equations describing its dynamics are linear; otherwise it is nonlinear.

• In a linear system, there is a linear relation between causes and effects (small causes have small effects); in a nonlinear system this is not necessarily so: small causes may have large effects.

• A dynamical system is conservative if the important quantities of the system (energy, heat, voltage) are preserved over time; if they are not (for instance if energy is exchanged with the surroundings) the system is dissipative.

• Finally a dynamical system is deterministic if the equations of motion do not contain any noise terms and stochastic otherwise.

Page 34: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Attractors• A crucial property of dissipative deterministic dynamical

systems is that, if we observe the system for a sufficiently long time, the trajectory will converge to a subspace of the total state space. This subspace is a geometrical object which is called the attractor of the system.

• Four different types of Attractors: • Point attractor: such a system will converge to a steady

state after which no further changes occur.• Limit cycle attractors are closed loops in the state space

of the system: period dynamics. • Torus attractors have a more complex ‘donut like’ shape,

and correspond to quasi periodic dynamics: a superposition of different periodic dynamics with incommensurable frequencies (Faure and Korn, 2001; Stam 2005).

Page 35: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Stam, 2005

Page 36: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Chaotic attractors

• The chaotic (or strange) attractor is a very complex object with a so-called fractal geometry. The dynamics corresponding to a strange attractor is deterministic chaos.

• Chaotic dynamics can only be predicted for short time periods.

• A chaotic system, although its dynamics is confined to the attractor, never repeats the same state.

• What should have become clear from this description is that attractors are very important objects since they give us an image or a ‘picture’ of the systems dynamics; the more complex the attractor, the more complex the corresponding dynamics.

Page 37: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Three-dimensional Lorenz attractors

Page 38: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Characterization of the attractors I

• If we take an attractor and arbitrary planes which cuts the attractor into two pieces (Poincaré sections), the orbits which comprise the attractor cross the plane many times.

• If we plot the intersections of the orbits and the Poincaré sections, we can know the structure of the attractor.

Page 39: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Characterization of the attractors II

• The dimension of a geometric object is a measure of its spatial extensiveness. The dimension of an attractor can be thought of as a measure of the degrees of freedom or the ‘complexity’ of the dynamics.

• A point attractor has dimension zero, a limit cycle dimension one, a torus has an integer dimension corresponding to the number of superimposed periodic oscillations, and a strange attractor has a fractal dimension.

• A fractal dimension is a non integer number, for instance 2.16, which reflects the complex, fractal geometry of the strange attractor.

Page 40: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Fractal dimension of the Attractor

Page 41: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Characterization of the attractors III

• Lyapunov exponents can be considered ‘dynamic’ measures of attractor complexity.

• Lyapunov exponents indicate the exponential divergence (positive exponents) or convergence (negative exponents) of nearby trajectories on the attractor.

• A system has as many Lyapunov exponents as there are directions in state space.

Page 42: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Characterization of the attractors IV

• A chaotic system can be considered as a source of information: it makes prediction uncertain due to the sensitive dependence on initial conditions.

• Any imprecision in our knowledge of the state is magnified as time goes by. A measurement made at a later time provides additional information about the initial condition.

• Entropy is a thermodynamic quantity describing the amount of disorders in a system.

r

s

pspH1

2 )2(log)(

Page 43: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Control parameters and multistability

• Control parameters are those system properties that can influence the dynamics of the system and that are either held constant or assumed constant during the time the system is observed.

• Parameters should not be confused with variables, since variables are not held constant but are allowed to change.

• Multistability: For a fixed set of control parameters, a dynamical system may have more than one attractor.

• Each attractor occupies its own region in the state space of the system. Surrounding each attractor there is a region of state space called the basin of attraction of that attractor.

• If the initial state of the system falls within the basin of a certain attractor, the dynamics of the system will evolve to that attractor and stay there. Thus in a system with multi stability the basins will determine which attractor the system will end on.

Page 44: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

The escape time plot gives the basin of attraction.

Page 45: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Bifurcations

• In a multistable system, the total of coexisting attractors and their basins can be said to form an ‘attractor landscape’ which is characteristic for a set of values of the control parameters.

• If the control parameters are changed this may result in a smooth deformation of the attractor landscape.

• However, for critical values of the control parameters the shape of the attractor landscape may change suddenly and dramatically. At such transitions, called bifurcations, old attractors may disappear and new attractors may appear (Faure and Korn, 2001; Stam 2005).

Page 46: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Bifurcations

Page 47: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

This EEG time series shows the transition between interictal and ictal brain dynamics. The attractor corresponding to the inter ictal state is high dimensional and reflects a low level of synchronization in the underlying neuronal networks, whereas the attractor reconstructed from the ictal part on the right shows a clearly recognizable structure. (Stam, 2003)

Page 48: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Route to Chaos

• Period doubling As the parameter increases, the period doubles:

period-doubling cascade, culminating into a behavior that becomes finally chaotic, i.e. apparently indistinguishable visually from a random process

• Intermittency A periodic signal is interrupted by random bursts

occurring unpredictably but with increasing frequency as a parameter is modified.

• Quasiperiodicity A torus becomes a strange attractor.

Page 49: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

R

Page 50: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

Intermittency

Page 51: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

The importance of dynamical stationarity

• Time series generated from nonlinear dynamical systems exhibit nonstationary (i.e. time-dependent) based on statistical measures (weak statistics) including the mean and variance, despite that the parameters in the dynamical process all remain constant.

• It indicates that the statistical stationarity of the time series does not imply its dynamical stationarity.

• Given that the EEG is possibly generated by the dynamical, cognitive process of the brain, the dynamical nonstationarity of the EEG can reflect on the state transition of the brain.

Page 52: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.

AD/HD: Attention-Deficit/Hyperactivity disorder

Correspondence with cognitive science (for a pretreated data):

Cognitive tasks (rest, image recognition, games…) = Brain Dynamical State

Change in cognitive States (Attention, Brain Functions …) = Nonstat. Detection

Main Hypothesis:

Since ADHD could have shorter characteristic time for attention, we could expect same order behavior inside a Cognitive State, which could be found analyzing the time criterion in loss of Dynamical Nonstationarity.

Definition of the Dynamical stationarity:

For two consecutive windows of a non stationary dynamical system time series, there should be change in dynamic from passage of one windows to another one.

Dynamical nonstationarity

Page 53: Linear vs. Nonlinear Jaeseung Jeong, Ph.D Department of Bio and Brain Engineering, KAIST.