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Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan
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Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Dec 13, 2015

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Page 1: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Laser desorption supersonic jet spectroscopy of hydrated tyrosine

June 18th, 2013

Hikari OBA

Tokyo Tech, Japan

Page 2: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Cooperative effect of hydrogen bond

*R. Nathaniel Pribble, et al.J. Chem. Phys., 106, 2145 (1997).

Bz-(MeOH)1

Bz-(MeOH)2

Page 3: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Why tyrosine-water cluster ?

Phenylalanine X

Tyrosine XR

Dopa

different ! almost same

[1]  L. C. Snoek, et al., CPL, 2000 321 49. [2] Y. Shimozono, et al., PCCP, 2013, 15, 5163. [3] S. Ishiuchi, et al., PCCP, 2011, 13, 7812

Page 4: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Why tyrosine-water cluster ?

Stronger H-bond

To Investigate cooperative effect of separate hydrogen bond

more enhanced ?

Dopa

weaker H-bond

Tyr XR-(H2O)1

Page 5: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Laser desorption supersonic jet

Page 6: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

REMPI and IR dip spectroscopyREMPI IR dip

Page 7: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

REMPI spectra

bands 1bands 2

[1] Y. Shimozono, et al., PCCP, 2013, 15, 5163

[1]

Page 8: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

REMPI

A)

B)

Different structures!

IR dip spectra of Tyr-(H2O)1 cluster

Page 9: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Assignment of water binding site

free OHH-bonded OH

*  T. Ebata, et al., International Journal of Mass Spectrometry and Ion Processes, 1996, 159, 111.

*

A)

B)

Tyr-(H2O)1

Phenol

Phenol-(H2O)1

*

Page 10: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Assignment of water binding site

bands 1bands 2 (phenolic OH bound)

Page 11: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Assignment of conformation of tyrosine-(H2O)1

Tyr XR-(H2O)1

Tyr XR

Tyr XR-(H2O)1

[1]

[1] Y. Shimozono, et al., PCCP, 2013, 15, 5163

phenolic OH bound

Page 12: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Phe X

Tyr XR

Dopa

Tyr XR-(H2O)1

Comparison of the effect on hydrogen bond in amino acid

stronger H-bond

weaker H-bond

This work !

?

Page 13: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Importance of direction of dipole moments

Dopa

Tyr XR-(H2O)1

Different direction !

Page 14: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Summary

REMPI and IR dip spectra of tyrosine-(H2O)1 were measured.

Direction of dipole moments is important to enhance the hydrogen bond strength in cooperative effect.

Page 15: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.
Page 16: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Acknowledgment

Merci beaucoup !

Ms. Yoko Shimozono

Dr. Shun-ichi Ishiuchi

Prof. Masaaki Fujii Chemical Resources Lab., Tokyo Tech.

Chemical Resources Lab., Tokyo Tech.

Chemical Resources Lab., Tokyo Tech.

Dr. Pierre Çarçabal Institut des Sciences Moléculaires d’Orsay, U. Paris-Sud.

Page 17: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.
Page 18: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.
Page 19: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.
Page 20: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.
Page 21: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

IR-UV Hole Burning spectra

Page 22: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Dipole moment of amino acid site and OH site

Page 23: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

REMPI spectra of Tyr, Tyr-(H2O)1, Dopa

Page 24: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Assignment of conformation

A)

B)

Page 25: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

Amino acid bound Phenolic OH bound

Page 26: Laser desorption supersonic jet spectroscopy of hydrated tyrosine June 18th, 2013 Hikari OBA Tokyo Tech, Japan.

IR spectra of 12 conformers of tyrosine [1]

Assignment of amino acid chain

[1] Y. Shimozono, et al., PCCP, 2013.