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It’s not easy being (photosynthetic) green…
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It’s not easy being (photosynthetic) green…. The origin and diversification of Flowering Plants om .

Jan 04, 2016

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Page 1: It’s not easy being (photosynthetic) green…. The origin and diversification of Flowering Plants  om  .

It’s not easy being (photosynthetic) green…

Page 2: It’s not easy being (photosynthetic) green…. The origin and diversification of Flowering Plants  om  .
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“…an abominable mystery…”

The origin and diversification of Flowering Plants

www.mrdowling.com

www.baruch.cuny.edu

http://patricianeelydorsey.webs.com

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Rafflesia arnoldi

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Amorphophallus titanium

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Wolffia

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Hydnora africana

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Amborella

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Austrobaileya

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Nymphales

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Illicium

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Monocots

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magnoliids

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eudicots

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www.gtlsys.com/TradeShow/Booth/117/flower.JPG

Late Jurassic-early Cretaceous

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Florissantia quilchenensis – Malvaceaewww.washington.edu/burkemuseum/images

Lower Cretaceous (145-99 Mya)

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Fossil data:lower Cretaceous – 130-140 Myapollen, Nymphaeales, Austrobaileyales

Molecular data:lower Jurassic – 175-200 MyaTriassic – 200-250 MyaPaleozoic – 300-350 Mya

Discordance

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Congruence btwn FR and molecular phylograms regarding sequence and mode of early AG diversification

BUT

Disagreement btwn fossil and molecular estimates on crown AG age

Conundrum

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Problematic Combinations of substitution rates and time Suspected to have biased MC estimates of

AG origins Exacerbated by lack of information

regarding substitution rates and/or absolute times to guide molecular dating

Long Branches

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Living Gymnos distant relatives Close AG relatives are extinct Phylogenetic relationships among living AG

unclear

Temporal constraints on LB

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Used fossil AG relatives to break the long branch

Nt sequences of fossil relatives were simulated using a “phylogeny and model parameters from living taxa” incorporated into molecular dating

Will breaking the long branch yield a more reliable dating of AG origin (congruent w/ FR?)

This study

Page 28: It’s not easy being (photosynthetic) green…. The origin and diversification of Flowering Plants  om  .

Question addressed by:◦ Breaking LB by including AG stem lineage

relatives◦ Using different relaxed clocks to estimate ages

across the tree◦ Focus on AG crown node

Does long AG BL misguide MCs?

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70 species, 69 genera 4 plastid genes Increasing taxonomic sample to break LB Bayesian analysis Branch lengths postulated by multiple

means (pg. 386) Sequences of AG stem relatives simulated

(pg. 386), introduced into 4 different RC analyses

Approach

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Only 1 of 4 dating methods resulted in younger age of AG crown

Hypothesis not supported:◦ Long AG stem branch causally responsible for

prior molecular estimates of crown AG age, or discrepancy btwn fossil record and molecular data.

◦ AG crown node sensitive to different relaxed clocks: 60 Myr difference btwn oldest and youngest (early Permian – upper Triassic)

Conclusions

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Large amount of extinct historical diversity Rapid radiations Possible substantial rate heterogeneity

among lineages thru time

Difficulty in aging crown AG

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“How exactly paleobiology can inform about molecular rates is an open question.”