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Introduction to Fluorescence Instrumentation: Fluorometers
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Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

May 20, 2020

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Page 1: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Introduction to Fluorescence Instrumentation:

Fluorometers

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Page 2: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fluorescence Lifetime

Steady-State - PC1

Fluorescence Instrumentation: Hands-on Experiments

Chronos: FD

ChronosBH: TD

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Page 3: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

PC1 T-format with Parallel Beam Geometry

Fully Automated

Steady-State Fluorescence

Compact Design

Upgradeable to Lifetime

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Page 4: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Excitation Monochromator Quantum Counter

Reference PMT

PMT PMT

Lamp

Beam splitter

Excitation Polarizer Filter

PMT

Filter

Emission Monochromator

Filter

Emission Polarizers

Sample cell

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Here is a schematic drawing of the Instrument. The instrument uses a 300 W Xeno Lamp as the excitation source, single monochrometers which are upgrateble to double and a red-sensitive PMT (R 928).
Page 5: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Excitation Spectra

Steady-State Polarization

Measurement Capabilities:

Emission Spectra

Synchronous Spectra

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The PC1 enable the measurement of:
Page 6: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fluorescence Lifetime

Product-Line:

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The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to the ground state by emitting a photon. Lifetimes can be single exponential or multi exponential. The measurement of the fluorescent lifetime is more difficult as compared to just the intensity. There are two widely used methods for measuring the fluorescent lifetime:
Page 7: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Two Ways to Measure Lifetime:

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The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to the ground state by emitting a photon. Lifetimes can be single exponential or multi exponential. The measurement of the fluorescent lifetime is more difficult as compared to just the intensity. There are two widely used methods for measuring the fluorescent lifetime:
Page 8: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

It = α e – t/τ

Time-Domain

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In the time-domain or pulsed method approach the fluorescent compound is excited with a laser pulse and the emission profile is measured by collecting the emitted photons with time (time-corelated single photon counting). TCSPC is a digital technique counting photons time-correlated with regards to the excitation pulse. The main tool is a time-to-amplitude converter which works like a fast stopwatch. There are about 2000 pins that are containing the info how long it take from the puls to generating the photon. Typically 80 Hz repetition rate.
Page 9: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Frequency Domain

Phase Shift

Demodulation

21

1

)(M

ωτ+=

tan φ = ωτ

EX

EM

(AC/DC)(AC/DC)M =

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The other way to measure fluorescence lifetimes is by using a modulated light source for excitation and to measure the phase lag or demodulation of the emitted light vs. the excitation light. The emitted light will have the same circular frequency but will be show phase lag of . Based on the phase lag the lifetime can be calculated tan = . Further, the emission is less modulated (demodulated) relative to the excitation. The relative amplitude of the variable portion of the emission AC is smaller for the emission than for the excitation.
Page 10: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Since January 2008 ISS offers both

Time-Domain and Frequency-Domain Instrumentation

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Faster acquisition due to continuous measurement rather than pulsed techniques Higher accuracy due to
Page 11: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

What are the main characteristics of Frequency Domain (FD)?

• In FD fluorescence lifetime is calculated from 2 measurable parameters: phase angle and modulation

• FD requires no deconvolution

• FD allows direct, one step measurements of anisotropy decays (rotational correlation times)

• FD is better in resolving short lifetime contributions as compared to TD

• FD is the method of choice for lifetime-based sensing and real-time measurements because of high sampling rates in the ms time scale

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Faster acquisition due to continuous measurement rather than pulsed techniques Higher accuracy due to
Page 12: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

What are the main characteristics of Time Domain (TD)? • As compared to FD, TD is a more direct way of measuring lifetime • Unlike FD, TD requires no reference but measurement of an instrument response function (IRF)

• TD anisotropy decay measurements do require two separate measurements at each plane of polarization

• TD has a low duty cycle - approximately only one photon per every 50 flashes is measured

• TD is the preferred method for measuring low fluorescence compounds

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Faster acquisition due to continuous measurement rather than pulsed techniques Higher accuracy due to
Page 13: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fluorescence Lifetime Chronos Multi-Frequency Cross-Correlation Phase Modulation Fluorimeter

Fully Automated

Lifetime Measurements Utilizing LEDs and LDs Affordable

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The second more affordable version is Chronos.
Page 14: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to
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Page 15: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Light Source Lines [nm]

Lamps Mercury-Arc 254, 313, 366, 405,

436, 546, 5781 Xenon-Arc 250–1000 Tungsten-Halogen 350–1000

Light Emitting Diodes (LEDs)

280, 300, 370, 460, 480, 520

Diode Lasers

370, 405, 436, 470, 635, 670, 780, 830

Lasers Helium–Cadmium Argon-Ion

325, 442 457, 488, 514

Nd:YAG Helium–Neon

1064, 5322 543, 594, 633

Krypton Ti-Sapphire

668, 647 tunable

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Page 16: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

0

30

60

90

10 4 10 5 10 6 10 7 10 8 10 9

Phas

e La

g [D

egre

es]

Modulation Frequency [Hz]

Lifetime [ns]:

1 3 10 30 100 300 1000

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From this Figure it can be seen that in order to measure a certain lifetimes in frequency domain one has to choose the right frequency range. Knowledge of the excited state lifetime of a fluorophore is crucial for quantitative interpretations of numerous fluorescence measurements such as quenching, polarization and FRET. The other important message is that one does not necessarily have to know the fluorescence lifetime when you measure in the frequency doamin (e.g. for sensing applications). The phase angle or modulation can be direcltly related to the analyte concentration.  
Page 17: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fluorescence Lifetime of Probes and Labels

λEx: 645-nm Diode Laser Em: 675-nm LP

τ = 1.01 ns (PB 7.4)

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Page 18: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

λEx: 786-nm Diode Laser Em: 830-nm LP

τ = 0.56 ns (water)

Fluorescence Lifetime of Probes and Labels

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Page 19: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fluorescence Lifetime ChronosBH Time-Correlated-Single-Photon-Counting Fluorometer

Fully Automated

Lifetime Measurements Utilizing Lasers and LDs

Intensity- and

Anisotropy Decay

Measurements in a Few Sec

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The second more affordable version is Chronos.
Page 20: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Schematic Drawing

PDL-445 nm pulsed DL with 20, 50, and 80 MHz repetition rates

Detector: PMC-100 4096 time bins

Average measurement time ~ few sec

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Page 21: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fluorescence Lifetime of Probes and Labels

λEx: 447-nm Diode Laser Em: 505-nm LP

τ = 4.05 ns (water)

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Page 22: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fluorescence Lifetime of Probes and Labels

λEx: 447-nm Diode Laser Em: KV 505 LP

τ = 5.66 ns (water)

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Page 23: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Vinci - Multidimensional Fluorescence Spectroscopy

Full Remote Instrument Control

Data Analysis

Automated Data Acquisition

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Page 24: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Vinci - Remote Instrument Control All instrument components are remotely accessible

Virtual layout same as instrument layout

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Page 25: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Acquisition Set Up

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Page 26: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to
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Page 27: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Experimental Parameters

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Page 28: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Measurement

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How is polarization or anisotropy measured: The sample containing the fluorescent probes is excited with linear polarized light and the vertical and horizontal components of the intensity of the emitted light are measured and the anisotropy of polarization is calculated using the following equations:
Page 29: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fitting

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Page 30: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fitting Results

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Page 31: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Fitting Models:

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Page 32: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Vinci-Multidimensional Fluorescence Spectroscopy

No Need to Export Data to Excel or Origin

Vinci – Produces Publication-ready

Plots and Figures

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Page 33: Introduction to Fluorescence Instrumentation: Fluorometers ...The fluorescence lifetime is the average time a fluorescent molecule remains in the excited state before going back to

Thank You!

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