Integrating Imhotep with existing Software and Hardware at NMGRL Jake Ross Bremen, Germany 3/29/11 New Mexico Geochronology Research Laboratory New Mexico Tech [email protected] QuickTime™ and a decompressor are needed to see this picture.
Integrating Imhotep with existing Software and Hardware at NMGRL
Jan 07, 2016
Integrating Imhotep with existing Software and Hardware at NMGRL. Jake Ross Bremen, Germany 3/29/11 New Mexico Geochronology Research Laboratory New Mexico Tech [email protected]. Components. Prep System. Database. Prep System Software. Mass Spectrometer. Data Processing Software. - PowerPoint PPT Presentation
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Integrating Imhotep with existing Software and Hardware at NMGRL
Jake Ross
Bremen, Germany 3/29/11
New Mexico Geochronology Research Laboratory
New Mexico Tech
QuickTime™ and a decompressor
are needed to see this picture.
Components
Prep System
Mass Spectrometer
Database
Data ProcessingSoftware
DAQSoftware
Prep SystemSoftware
Mass Spec.Software
Model 1
Prep System
Mass Spectrometer
Database
Data ProcessingRoutines
DAQRoutines
Prep SystemRoutines
Mass Spec.Routines
Al Deino’s Mass Spec
Software
Computer
Model 1
Prep System
Mass Spectrometer
Database
Data ProcessingRoutines
DAQRoutines
Prep SystemRoutines
Mass Spec.Routines
Imhotep
CSV
Software
Computer
Model 2
Prep System
Mass Spectrometer
DAQRoutines
Prep SystemRoutines
Mass Spec.Routines
Imhotep
CSV
Databaseor
filesystemData Processing
Routines
Software
Computer
Model 3
Prep System
Mass SpectrometerData Processing
Routines
DAQRoutines
Prep SystemRoutines
Mass Spec.Routines
Hardware specificDAQ Routines
Manager
Worker
Worker
Manager
Mass Spec Imhotep
Pychron
MySQL
Database
Software
Computer
MySQL
Model 3
Prep System
Mass Spectrometer
Database
Data ProcessingRoutines
DAQRoutines
Prep SystemRoutines
Mass Spec.Routines
Hardware specificDAQ Routines
Manager
Worker
Worker
Mass Spec Imhotep
Pychron
Software
Computer
Pychron-Imhotep Interface
• Pychron• RemoteHardware
Server
• Hardware Panel– Switch Panel Item
• DIO– Associated C# script
Pychron
• Python (EPD)• Enthought Tool Suite
• Rapid prototyping Framework• Flexible, extensible and configurable• Hardware Control
– USB, RS232/485, LAN (TCP or UDP)
• Full featured Photon Machines interface
Photon Machines Fusions
RemoteHardwareServer
• TCP/UDP server– Python Standard Library (SocketServer)
• Minimal GUI
Hardware Panel
Hardware Panel
Switch DIO HardwareScript
HardwareScript
Valve Protocol
1. Hardware Panel Switch• SetParameter()
2. Imhotep hardware script• Open [Valve Name]
3. RemoteHardwareServer• Repeat command to Pychron
4. Pychron• Parse command and act• OPEN A ==> Rout:301 OPEN
5. Aglient or arduino valve actuator• Actuate valve• Return status
Imhotep
RHS
Pychron
Device
TCP
IPC
USBRS-485RS-232
Mac Mini
LAN
ImhotepValve A Valve B
RemoteHardwareServer
Pychron
TCPServer
Hardware
Agilent/Arduino GP act.
Prep System
Dell
Mac Pro
Mass Spectrometer
HardwareElectronics
IPC
Mass Spec
CO2 UV Diode
Mac Mini
LAN
ImhotepValve A Valve B
RemoteHardwareServer
Pychron
TCPServer
Hardware
Agilent/Arduino GP act.
Prep System
Dell
Mac Pro
Mass Spectrometer
HardwareElectronics
IPC
Mass Spec
CO2 UV Diode
Unix Socket, TCP and RS232
N trials = 500 Min = 18.8 ms Mean = 21.45 ms std =3.41 Max = 39.68 ms19200 baud
Time (ms)
freq
uenc
y
Jake RossNew Mexico Tech / NMGRL
http://code.google.com/p/arlab/
API (out of date)http://nmt.edu/~jirhiker/
[email protected] or [email protected]
QuickTime™ and a decompressor
are needed to see this picture.
MDD Plugin
Mac Mini
LAN
ImhotepValve A Valve B
RemoteHardwareServer
Pychron
TCPServer
Hardware
Agilent/Arduino GP act.
Prep System
Dell
Mac Pro
Mass Spectrometer
HardwareElectronics
IPC
Mass Spec
CO2 UV Diode
N trials = 1000 Min = 2.54 ms Mean = 2.97 ms std =0.597 Max = 14.35 ms
Time (ms)
freq
uenc
y
RHS Pychron
Unix Socket
Mac Mini
LAN
ImhotepValve A Valve B
RemoteHardwareServer
Pychron
TCPServer
Hardware
Agilent/Arduino GP act.
Prep System
Dell
Mac Pro
Mass Spectrometer
HardwareElectronics
IPC
Mass Spec
CO2 UV Diode
N trials = 500 Min = 2.14 ms Mean = 3.80 ms std =2.18 Max = 24.70 ms
Time (ms)
freq
uenc
y
RHS PychronClient
TCP
Unix Socket and TCP
LAN
UNIX
Unix and TCP no logging
N trials = 1000 Min = 1.96 ms Mean = 2.69 ms std = 0.48 Max = 5.46 ms
Time (ms)
freq
uenc
y
N trials = 1000 Min = 0.11 ms Mean = 0.37 ms std = 0.67 Max = 10.13 ms
Shared Memory IPC
Time (ms)
freq
uenc
y
N trials = 1000 Min = 3.77 ms Mean = 6.27 ms std =3.15 Max = 35.96 ms
Time (ms)
freq
uenc
y
RHS PychronClient
localhost
Unix Socket and TCP
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