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Information • Today Chapter 14 and 16 highlights Wed., 30 November Final exam review – BRING YOUR QUESTIONS! Instructor evaluations Mon., 12 December, 2:15-4:15pm in C317 Final Exam kpeterson@oeb . harvard .edu • Office: B-203 (by appointment)
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Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Dec 30, 2015

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Page 1: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Information

• Today– Chapter 14 and 16 highlights

• Wed., 30 November– Final exam review – BRING YOUR QUESTIONS!– Instructor evaluations

• Mon., 12 December, 2:15-4:15pm in C317– Final Exam

[email protected]• Office: B-203 (by appointment)

Page 2: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Chapter 14

READ: – Key Concepts– 14.1– 14.2

Page 3: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

1) DNA is transcribed to form RNA

2) RNA is translated to form polypeptide chains, which fold to form proteins

DNA to Proteins

Page 4: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

3 Classes of RNAs

• Messenger RNA (mRNA)

– Protein-building instruction

• Ribosomal RNA (rRNA)

– Major component of ribosomes

• Transfer RNA (tRNA)

– Delivers amino acids to ribosomes

Page 5: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Base Pairing during Transcription

DNA

DNA DNA

RNAG C A T

C G T A

G C A U

C G T A

base pairing in DNA replication base pairing in transcription

Page 6: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Transcription• Small DNA stretch = template

• RNA polymerase = enzyme

• Product = 1 RNA strand

transcribed DNA winds up again

DNA to be transcribed unwinds

mRNAtranscript RNA

polymerasePROTEIN INSTRUCTIONS

Page 7: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Genetic Code

• 64 base triplets

• Triplets = codons– 61 = amino acids

– 3 = stop

Figure 14.7Page 230

Page 8: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

tRNA Structure

codon in mRNA

anticodon

amino acid OH

amino-acidattachment site

Figure 14.8Page 231

BRINGS AMINO ACIDS TO RIBOSOMES

Page 9: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Overview

Transcription

Translation

mRNA rRNA tRNA

Mature mRNA transcripts

ribosomal subunits

mature tRNA

Page 10: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Chapter 16

READ 16.2, 16.4

Page 11: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Polymerase Chain Reaction(PCR)

Double-stranded DNA to copy

DNA heated to 90°– 94°C

Primers added to base-pair with ends

Mixture cooled; base-pairing of primers and ends of DNA strands

DNA polymerasesassemble new DNA strands

Figure 16.6Page 256

Stepped Art

Page 12: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Polymerase Chain Reaction

Figure 16.6Page 256

Stepped Art

Mixture heated again; makes all DNA fragments unwind

Mixture cooled; base-pairing between primers and ends of single DNA strands

DNA polymerase action again doubles number of identical DNA fragments

Page 13: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Gel Electrophoresis

• DNA placed at one end of a gel

• A current is applied

• DNA molecules (-) move to + end

• Small molecules faster than large

Page 14: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Nucleotides for Sequencing

• Standard nucleotides (A, T, C, G)

• Modified versions– Fluoresce

– Stop DNA synthesis

Page 15: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Reactions Proceed

• PCR

• Stops with modified nucleotide

• Millions of copies of varying length

Page 16: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Recording the Sequence

T C C A T G G A C CT C C A T G G A C

T C C A T G G A

T C C A T G G

T C C A T G

T C C A T

T C C A

T C C

T C

T

electrophoresisgel

one of the many fragments of DNA migratingthrough the gel

one of the DNA fragmentspassing through a laser beam after moving through the gel

T C C A T G G A C C A

•DNA placed on gel

•Fragments move by

size

•Pass through laser

beam

•Color of each fragment

is recorded on printout

Figure 16.8Page 258

Page 17: Information Today –Chapter 14 and 16 highlights Wed., 30 November –Final exam review – BRING YOUR QUESTIONS! –Instructor evaluations Mon., 12 December,

Information

• Today– Chapter 14 and 16 highlights

• Wed., 30 November– Final exam review – BRING YOUR QUESTIONS!– Instructor evaluations

• Mon., 12 December, 2:15-4:15pm in C317– Final Exam

[email protected]• Office: B-203 (by appointment)