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INFLORESCENCE DEVELOPMENT IN TOMATO: LINKING GENE FUNCTION WITH A ZIGZAG MODEL CLAIRE PÉRILLEUX, GUILLAUME LOBET, PIERRE TOCQUIN PLANT PHYSIOLOGY, PHYTOSYSTEMS, UNIVERSITY OF LIÈGE Genetic Variation of Flowering Time Genes and Applications for Crop Improvement Bielefeld - 25 March 2014
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INFLORESCENCE DEVELOPMENT IN TOMATO: … · INFLORESCENCE DEVELOPMENT IN TOMATO Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement

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Page 1: INFLORESCENCE DEVELOPMENT IN TOMATO: … · INFLORESCENCE DEVELOPMENT IN TOMATO Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement

I N F L O R E S C E N C E D E V E L O P M E N T I N T O M AT O : L I N K I N G G E N E F U N C T I O N W I T H A Z I G Z A G M O D E L

C L A I R E P É R I L L E U X , G U I L L A U M E L O B E T, P I E R R E T O C Q U I N P L A N T P H Y S I O L O G Y, P H Y T O S Y S T E M S , U N I V E R S I T Y O F L I È G E

Genetic Variation of Flowering Time Genes and Applications for Crop Improvement

!

Bielefeld - 25 March 2014

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I N F L O R E S C E N C E D E V E L O P M E N T I N T O M AT O

1 Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

Vegetative phase Reproductive phase

SAM

FM0

SYMF0

SYM

F0 F1

SYMTM FM2

IM3IM2

FM1IM1 SYM

A. B.

Page 3: INFLORESCENCE DEVELOPMENT IN TOMATO: … · INFLORESCENCE DEVELOPMENT IN TOMATO Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement

E X I S T I N G M O D E L S O F I N F L O R E S C E N C E D E V E L O P M E N T

3

P R U S I N K I E W I C Z E T A L . 2 0 0 7

V E G E TAT I V E N E S S O F M E R I S T E M S D E C R E A S E W I T H A G E A N D

D E F I N E T H E I N F L O R E S C E N C E A R C H I T E C T U R E

PA R K E T A L . 2 0 1 2

M AT U R AT I O N R AT E O F M E R I S T E M S D E F I N E S T H E O V E R A L L

I N F L O R E S C E N C E A R C H I T E C T U R E

Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

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4

C R E AT E A S I M P L E M O D E L O F I N F L O R E S C E N C E D E V E L O P M E N T T H AT C A N A C C O U N T F O R A L L E X I S T I N G P H E N O T Y P E S O B S E R V E D I N T O M AT O

A I M O F T H E P R O J E C T

Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

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V E G E TAT I V E G A I N A N D L O S S G E N E R AT E S A Z I G Z A G M O D E L

2

3

4

5

6

7

8

T I M E [ P L A S T O C H R O N S ]

ME

RIS

TE

M V

EG

ETA

TIV

EN

ES

S [

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Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014 5

F L O R A L T R A N S I T I O N L E A F R E P R E S S I O N

F L O R A L C O M M I T M E N T M E R I S T E M R E P R E S S I O N

V E G E TAT I V E L O S S[ d V ]

V E G E TAT I V E G A I N [ΔV ]

Page 6: INFLORESCENCE DEVELOPMENT IN TOMATO: … · INFLORESCENCE DEVELOPMENT IN TOMATO Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement

F L O R A L T R A N S I T I O N L E A F R E P R E S S I O N

F L O R A L C O M M I T M E N T M E R I S T E M R E P R E S S I O N

Z I G Z A G M O D E L : D E C R E A S I N G V E G E TAT I V E L O S S [ d V ]

6

2

3

4

5

6

7

8

T I M E [ P L A S T O C H O N S ]

ME

RIS

TE

M V

EG

ETA

TIV

EN

ES

S [

- ]

Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

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2

3

4

5

6

7

8

T I M E [ P L A S T O C H O N S ]

ME

RIS

TE

M V

EG

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TIV

EN

ES

S [

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F L O R A L T R A N S I T I O N L E A F R E P R E S S I O N

F L O R A L C O M M I T M E N T M E R I S T E M R E P R E S S I O N

Z I G Z A G M O D E L : I N C R E A S I N G V E G E TAT I V E L O S S [ d V ]

6 Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

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F L O R A L T R A N S I T I O N L E A F R E P R E S S I O N

F L O R A L C O M M I T M E N T M E R I S T E M R E P R E S S I O N

7

Z I G Z A G M O D E L : I N C R E A S I N G V E G E TAT I V E G A I N [ΔV ]

2

3

4

5

6

7

8

T I M E [ P L A S T O C H O N S ]

ME

RIS

TE

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EG

ETA

TIV

EN

ES

S [

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Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

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ΔV

dVdV

ΔV

dV

ΔV

A. Number of flowers B. Branching level C. Number of vegetative axes

T H E Z I G Z A G M O D E L I S U S E D T O G E N E R AT E A M O R P H O S PA C E

8

ΔV: 0→3 d V: 0 →2 0

R U N T H E M O D E L

Q U A N T I F Y T H E O U T P U T

Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

Page 10: INFLORESCENCE DEVELOPMENT IN TOMATO: … · INFLORESCENCE DEVELOPMENT IN TOMATO Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement

L i p p m a n e t a l . 2 0 0 8 , P L o S B i o l o g y

s f t s

A l l e n a n d S u s s e x , 1 9 9 6 , P l a n t a

f a l s i f l o r a ( f a ) L FY

dV

ΔV

A l l e n a n d S u s s e x , 1 9 9 6 , P l a n t a

a n a n t h a ( a n ) UFO

M c A l i s t e r e t a l . , 2 0 1 2 , N a t u r e G e n e t i c s

t e r m i n a t i n g f l o w e r ( t m f )

S z y m k o w i a k a n d I r i s h 1 9 9 9 , P l a n t C e l l

j o i n t l e s s ( j ) AGL24

M o l i n e r o - R o s a l e s e t a l . , 2 0 0 4 , P l a n t a

s i n g l e f l o w e r t r u s s ( s f t ) FT

Q u i n e t e t a l . , 2 0 0 6 , J E x p B o t

c o m p o u n d i n f l o re s c e n c e ( s ) WOX9

T H E Z I G Z A G M O D E L I S U S E D T O G E N E R AT E A M O R P H O S PA C E

9

W T

Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

d V

ΔV

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G E N E F U N C T I O N S W I T H I N T H E Z I G Z A G M O D E L

V E G E TAT I V E G A I N

V E G E TAT I V E L O S S

2

3

4

5

6

7

8

T I M E [ P L A S T O C H R O N S ]

ME

RIS

TE

M V

EG

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TIV

EN

ES

S [

- ]

F L O R A L T R A N S I T I O N FA , S F T

F L O R A L C O M M I T M E N T A N

Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

FA , S , J , T M F

FA , J , S F T

1 0

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F M

I M

v e g

v e g

A N

FA J S

T M F

S F T

Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement | Bielefeld - 24 March 2014

G E N E F U N C T I O N S W I T H I N T H E Z I G Z A G M O D E L

1 1

C. Périlleux, G. Lobet, and P. Tocquin, 2014, Inflorescence architecture in tomato: gene functions within a zigzag model, Frontiers in Plant Genetics and Genomics.

F T

L F YA G L 2 4

U F O

W O X 9

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T H A N K Y O U F O R Y O U R AT T E N T I O N !

A N Y Q U E S T I O N S ?

Page 14: INFLORESCENCE DEVELOPMENT IN TOMATO: … · INFLORESCENCE DEVELOPMENT IN TOMATO Périlleux et al. | Genetic Variation of Flowering Time Genes and Applications for Crop Improvement