DanSeed Symposium 2014 10.-11.03.2014 Kobæk Strand In vitro techniques for propagation and breeding of horticultural crops Traud Winkelmann Institute of Horticultural Production Systems, Leibniz Universitaet Hannover Herrenhaeuser Str 2 Leibniz Universitaet Hannover, Herrenhaeuser Str. 2, D-30419 Hannover, Germany,
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DanSeed Symposium 201410.-11.03.2014Kobæk Strand
In vitro techniques for propagation and q p p gbreeding of horticultural crops
Traud WinkelmannInstitute of Horticultural Production Systems,
Commercially most important Commercially most important Pros:
+ Easy+ Easy+ Applicable to many genotypes and species+ Low risk for somaclonal variation+ Low risk for somaclonal variation
Cons: - Labour intensive, therefore expensive- Difficult to automate- Needs several culture steps with different
requirements regarding media (rooting = extra step)
6 Traud Winkelmann 11.03.2014
Culture systems for in vitro propagation
Culture on solid media+ High plant quality+ High plant quality- Solidifying agents: expensive- Limited numbers per vessel/shelf…
Culture in liquid media+ Easy handling+ Fast growth and propagation+ Fast growth and propagation+ Scale-up and automation possible- Physiological disorders- Risk of contaminations
TIS = temporary immersion systems+ High plant qualityg p q y+ Fast growth and propagation+ Scale-up and automation possible- Risk of contaminations- High prices for vessels
In vitro techniques for plant propagation -summary
Commercial micropropagation successful in plant species that are
Difficult to propagate by conventional means
Efficiently propagated in vitro
High-priced
Different ways of propagation and culture systems Different ways of propagation and culture systemsare described, but almost exclusively used forproduction:
Axillary shoot formation
Culture on solid media in relatively small vessels
9
Culture on solid media in relatively small vessels
Traud Winkelmann 11.03.2014
1. Production of disease-free plants
Meristem/meristem tip culture
Free of pathogensmeristem tip culture
Thermotherapy Cryotherapy
meristematic dome
Important for all vegetativelypropagated ornamentals meristem tippropagated ornamentals(e.g. Pelargonium, Chrysanthemum, petunias), potato berry fruits
meristem tip
Jansen et al. (1984)potato, berry fruits Success in
establishing
Photos: Hydrangea
Traud Winkelmann10
y gby A. Doil
3 days 4 weeks 6 weeks
11.03.2014
Meristem tip culture in Dahlia (MSc Thesis Sabine Oster)
1 mm
6 weeks
6 weeks
0,5 cm1 cm
6 weeks
1 cm
2 weeks
1 cm
2 weeks
10 d
11 Traud Winkelmann 11.03.2014
TSV (Tobacco Streak Virus) detection
M pC D6 D10 D11 D13 D14 D15 D16 D17 D18 D19 D20 D21 D22 nC M
Original plants
17 out of17 out of21 genotypesinfected
After meristem tip culture
TSV‐amplificate
316 bp
infected(81%)
M pC D8.2B D2.1A D5.2A D5.2B D5.2D nC M
After meristem tip culture
Elimination of TSV in 9Elimination of TSV in 9 genotypes.
TSV‐amplificate
316 bp
Oster et al. DGG proceedings
12 Traud Winkelmann 11.03.2014
p g(2013)
DMV (Dahlia Mosaic Virus) detection
Original plantsL Dvf Dvf 1 2 3 4 5 6 7 8 nC L L 1 2 3 4 5 6 7 8 nC L
After meristem tip cultureL Dvf Dvf 1 2 3 4 5 6 7 8 nC L L 1 2 3 4 5 6 7 8 nC L
DMVDMV-690 bp
All tested dahlias were infected with DMV (100 %, n = 77)
O t t l DGG di
13 Traud Winkelmann 11.03.2014
Oster et al. DGG proceedings(2013)
2. Interspecific hybridisation
2
1 mm
Many ornamentals = recent or ancient interspecific hybrids
2
interspecific hybrids Potential for novelties not fully tapped Identification of barriers by observing
3pre-zygotic Identification of barriers by observing
in situ pollen tube growth Pre-zygotic barriers in vitro Pre-zygotic barriers in vitro
Nutrition of the developing embryo Insulates embryo from mechanical pressure imposed by the Insulates embryo from mechanical pressure imposed by the
seed coat Endosperm-embryo signaling influencing
Developing embryo Maturation/growth arrest (ABA)
Regulates germination timingg g g
Developing an artificial endosperm for somatic embryos?
11.03.2014Traud Winkelmann45
EndophytesWhat are Endophytes?
Microorganisms internally colonizing plants and establishing neutral or beneficial interactions with their host(Anand et al. 2006)
Most endophyte/plant relationships are not well understood.
In vitro culture:
Often regarded as negative
Causing losses during culture, especially during rooting and acclimatisation
First reports of beneficial endophytes: Paenibacillus (Ulrich et al. 2008, PCTOC 93: 347-351)
Traud Winkelmann46
347 351)
11.03.2014
Prunus avium for timber production Fast growing hardwood for the production of
high quality furniture.
B di l t i ht t d d Breeding goals: straight stem, good wood quality, fast growth.
To achieve these characteristics single trees To achieve these characteristics single trees with a good habitus are selected and propagated as in-vitro clones.
A mixture of several Prunus avium clones in each batch to ensure plant diversity in the field.
11.03.2014Traud Winkelmann47
(Mona Quambusch, PhD project)
In vitro culture of Prunus avium
11.03.2014Traud Winkelmann48
Endophytes in Prunus avium(Mona Quambusch, PhD project)
Endophytes in Prunus avium
Identification of endophytic bacteria Identification of endophytic bacteria Quantification of endophytes (qPCR)
in different culture phases in different culture phases under stress conditions
Understanding the balance of endophytic bacteria Understanding the balance of endophytic bacteria Isolation of beneficial bacteria Inoc lation of c lt es ith beneficial bacte ia Inoculation of cultures with beneficial bacteria
(cooperation with Institut für Pflanzenkultur, Schnega)
COST action FA1103: www endophytes eu
Traud Winkelmann49
COST action FA1103: www.endophytes.eu
11.03.2014
Identification of bacteria(Mona Quambusch, PhD project)
Culture-dependent Culture-papproach independent
approach
DNA extracted from plant materialDNA from bacterial isolates
11.03.201450 Traud Winkelmann
Identification of bacteriaIsolation of bacterial endophytes
Plant material Pure culture
Nep
tun
+N
ria ±
es
Aste
r+G
enot
yp no bacteria
Dem
eter
Growth media: nutrient agar and medium #523 (Viss et al 1991) Growth media: nutrient agar and medium #523 (Viss et al. 1991) Cultivation at RT for 5 weeks
11.03.201451 Traud Winkelmann
Identification of bacteria
Neptun (+) Three bacterial isolates tested (N-I2, N-I3, N-I4).
The sequences are identical. 99% identical to Rhodopseudomonas (genus),
phylum Proteobacteria.phylum Proteobacteria.
Demeter (+) Two bacterial isolates sequenced Two bacterial isolates sequenced. D-I1:
100% identical to Microbacterium( ) h l b(genus), phylum Actinobacteria.
D-I3: 100% identical to Bacillus (genus), (g ),
phylum Firmicutes.
11.03.201452 Traud Winkelmann
Quambusch et al. (2014) Tree Physiology: accepted
Identification of bacteriaPCR on 16S rDNA
±± + +--
bacterial amplicon mitochondrial ampliconbacterial amplicon, mitochondrial amplicon* Indicates amplicons used for cloning and ARDRA
DNA extracted from in vitro plant material of propagation phase
d f d Primers used: 799f and 1492r. (Chelius and Triplett, 2001)
11.03.201453 Traud Winkelmann
Identification of bacteriaAmplified rDNA Restriction Analysis (ARDRA)
Restriction patterns of 95 bacterial 16S rDNA
11.03.201454 Traud Winkelmann
Restriction patterns of 95 bacterial 16S rDNAfragments of a plant sample of Neptun (+).
Identification of bacteria(Mona Quambusch, PhD project)
Results of culture-independent analysis
Endophytic population of four Prunus avium genotypes
80%
100%
clon
es
40%
60%
orti
on o
f
Rhodopseudomonas spp.
other α-Proteobacteria
Microbacterium spp.
0%
20%
tive
pro
po
oba u spp
Mycobacterium spp.
uncultured bacterial clone
Fama - Achilleus - Neptun + Demeter +
Rel
at
Prunus genotype
11.03.201455 Traud Winkelmann
Identification of bacteria(Mona Quambusch, PhD project)
Summary of results from culture independent and -dependent method
Phylogenetic tree based on 16S rDNA showing the relationship of clones andPhylogenetic tree based on 16S rDNA showing the relationship of clones and isolates from different Prunus avium genotypes to reference sequences.
11.03.201456 Traud Winkelmann
Inoculation with EndophytesQuambusch et al. (2014) Tree Physiology: accepted
Experimental design Two genotypes: Fama(–) and Achilleus (–) Inoculation with two isolates: N-I-2 (Rhodopseudomonas) and D-I-1
(Microbacterium) 5 min treatment with bacterial suspension in 10mM MgSO4 5 min treatment with bacterial suspension in 10mM MgSO4 Evaluation of rooting after three weeks, n = 8 vessels with 5 shoots
***** *
**
11.03.201457 Traud Winkelmann
Asterisks indicate significant differences between the treatments and corresponding control by Dunnett’s test (*, ** and *** indicate p ≤ 0.05, 0.01 and 0.001 respectively).
Summary
In vitro culture techniques
Diverse applications in propagation and breeding
Potential not fully tappedy pp
Deeper understanding of regeneration processes aspired
Use of molecular tools reasonable Use of molecular tools reasonable
New view on endophytes?
New plant growth regulators
Traud Winkelmann58 11.03.2014
ReferencesMEINERS, J., DEBENER, T., SCHWEIZER, G. AND T. WINKELMANN (2011): Analysis of the taxonomic subdivision within the genus
Helleborus by nuclear DNA content and genome-wide DNA markers. Scientia Horticulturae 128: 38-47MEINERS, J. AND T. WINKELMANN (2012): Evaluation of reproductive barriers and realisation of interspecific hybridisations
depending on the genetic distances between species in the genus Helleborus. Plant Biology, 14: 576-585MWANGI, J.W., RODE, C., COLDITZ, F., HAASE, C., BRAUN, H.P. AND T. WINKELMANN (2013): Proteomic and histological analyses
of endosperm development in Cyclamen persicum as a basis for optimization of somatic embryogenesis. Plant p p y p p y gScience 201–202: 52–65
OSTER, S., MAISS, E. AND T. WINKELMANN (2013): Detection and elimination of plant viruses in Dahlia. DGG-Proceedings Vol. 3, May 2013, No. 3: 1-5, DOI: 10.5288/dgg-pr-03-03-so-2013 http://www.dgg-online.org/proceedings/vol-03-2013/dgg-pr-03-03-so-2013.pdf
QUAMBUSCH M PIRTTILÄ A M MYOSORE V T WINKELMANN T AND M BARTSCH (2014): Endophytic bacteria in plant tissueQUAMBUSCH, M., PIRTTILÄ. A.M., MYOSORE, V. T., WINKELMANN, T. AND M. BARTSCH (2014): Endophytic bacteria in plant tissue culture: differences between easy- and difficult-to-propagate Prunus avium genotypes. Tree Physiology (accepted)
PRANGE, A.N.S., SEREK, M., BARTSCH, M. AND T. WINKELMANN 2010: Efficient and stable regeneration from protoplasts of Cyclamen coum Miller via somatic embryogenesis. Plant Cell Tiss. Org. Cult. 101:171–182
PRANGE, A.N.S., BARTSCH, M., MEINERS, J., SEREK, M. AND T. WINKELMANN (2012): Interspecific somatic hybrids between C l i d C t ll i tibl i Pl t C ll R 31 723 735Cyclamen persicum and C. coum, two sexually incompatible species. Plant Cell Rep. 31:723-735
RODE, C., GALLIEN, S., HEINTZ, D., VAN DORSSELAER, A., BRAUN, H.-P. AND T. WINKELMANN (2011A): Enolases: Storage compounds in seeds? Evidence from a proteomic comparison of zygotic and somatic embryos of Cyclamen persicumMill. Plant Mol Biol 75: 305-319
RODE, C., SENKLER, M., KLODMANN, J., WINKELMANN, T. AND H.-P. BRAUN (2011B): GelMap – A novel software tool for building ( ) p gand presenting proteome reference maps. Journal of Proteomics 74: 2214-2219
RODE, C., LINDHORST, K., BRAUN, H.-P. AND T. WINKELMANN (2012): From callus to embryo - a proteomic view on the development and maturation of somatic embryos in Cyclamen persicum. Planta 235: 995-1011
SCHWENKEL, H.-G. UND T. WINKELMANN (1998): Plant regeneration via somatic embryogenesis from ovules of Cyclamen persicum Mill Plant Tiss Cult Biotechnol 4 (1): 28 – 34persicum Mill.. Plant Tiss. Cult. Biotechnol. 4 (1): 28 34
WINKELMANN, T., MEYER, L. UND M. SEREK (2004): Germination of Encapsulated Somatic Embryos of Cyclamen persicum. HortScience 39 (5): 1093-1097
WINKELMANN, T., MUßMANN, V. UND M. SEREK (2004): Cryopreservation of embryogenic suspension cultures of Cyclamen persicum Mill. Plant Cell Rep. 23 (1-2): 1-8
S S 2006 ff l f l l d f bWINKELMANN, T., SPECHT, J. AND M. SEREK 2006: Efficient plant regeneration from protoplasts isolated from embryogenicsuspension cultures of Cyclamen persicum Mill. Plant Cell Tiss. Org. Cult. 86: 337-347