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Identifying Tree Species From Bark David Gainer
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Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Jan 13, 2016

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Page 1: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Identifying Tree Species From Bark

David Gainer

Page 2: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Why Bark?

• Year-Round

• Can be used for dead trees/logs/stumps

• Can be observed at ground level

• Can be combined with systems for leafs/needles/twigs/etc.

Page 3: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Inherent Difficulties

• Age: Old Trees Have Very Different Looking Bark than Young Trees (So a complete system would have to identify tree and age range).

Juvenile Bunya Pine Mature Bunya Pine

Pictures from: http://tree-species.blogspot.com/

Page 4: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Inherent Difficulties

• Shape: Shape of the trunk effects the appearance of the bark.

Page 5: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Human Performance

• Osterreichische Bundesforste AG Dataset

• 2 Experts: 56.6% and 77.8% (trouble with the different pines)

Source: Fiel and Sablatnig http://cvww2011.icg.tugraz.at/papers_web/p13.pdf

Page 6: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Prior Results/Approaches

• Wan et al (2004) 77% with GLCM. Higher using color bands separately. 170 images of 9 classes

• Song et al (2004) 87.5% with GLCM and binary features. 180 images of 8 classes

• Huang et al (2006) 92.5% with GLCM and fractal dimensions. 360 images of 24 classes

• Fiel and Sablating (2011) 69.7% vectors of SIFT pattern matches. 1183 images of 11 classes. Found that GLCM only yielded 61% for the same dataset

Page 7: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

My Dataset

• Pictures of species in Central Park• 2 Pictures for each individual tree• Taken with iPhone, for each tree 1 picture

using HDR setting, 1 with the standard• Taken between 14” and 16” away from the

tree• Goal is 10 or more pictures for each

species for 20 or more species• Currently 4-14 pictures for 14 tree species

Page 8: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

My Dataset

• Current Species: American Elm, London Plane, Red Oak, Eastern White Pine, Willow, Beech, Cherry (Kwanzan), Norway Maple, Birch (Himalayan Whitebark), Linden, American Sycamore, Blue Spruce, Sycamore Maple, Swamp Oak

• Identified with Help of Ned Barnard and Ken Chayas “Central Park Entire” map

Page 9: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Birch (Himalayan Whitebark)

American Elm

London Plane Beech

Birch (Himalayan Whitebark) American Elm

London Plane Beech

Page 10: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Feature Selection

• From the prior research, I intend to implement GLCM, look at fractal dimensions

• I’d also like to come up with some new statistics especially from various qualities of edge images

• I’d also like to look at statistics derived from line detection

Page 11: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Feature Selection

• Gradient/Edge images in X and Y directions:

Page 12: Identifying Tree Species From Bark David Gainer. Why Bark? Year-Round Can be used for dead trees/logs/stumps Can be observed at ground level Can be combined.

Classification

• Compare k-nn, multiclass SVM and maximum likelihood approaches