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How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis
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How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Dec 17, 2015

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Edgar White
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Page 1: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

How do coated vesicles go to the right place and fuse with the

right membrane?

The “SNARE” hypothesis

Page 2: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

SNARE

• Vesicle-SNAP-receptors (v-SNAREs)

• Target-SNAP-receptors (t-SNAREs)

• SNAP=soluble NSF attachment proteins

• NSF=N-ethylmaleimide-sensitive factor

Page 3: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 4: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Lysosomes

• Digestive enzymes

• Low pH (4-5)

• Develop from late endosomes/hydrolases from Golgi

• Activated by lowering the pH

Page 5: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 6: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Extracellular components

• Cell walls

• Extracellular matrix– Bone– Cartilage– Connective tissue

Page 7: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Types of molecules in ECM

• Structural proteins—strength/flexibility– Collagen– Elastin

• Proteoglycans--matrix• Adhesive glycoproteins—stick cells to

matrix– Fibronectins– laminins

Page 8: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Collagen--strength

Page 9: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Synthesis--fibroblasts

Page 10: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Elastin--flexibility

Page 11: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Glycosaminoglycans

Page 12: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Proteoglycans—hydrated matrix

Page 13: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Adhesive glycoproteins

• Extracellular– Fibronectins– Laminins

• Cell surface– Integrins

Page 14: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Fibronectins

• Group of adhesive glycoproteins

• 2 long linked proteins

• Several binding domains

Page 15: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 16: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Fibronectin roles

• Anchor cells to ECM

• Maintain cell shape

• Cell movement

• Blood clotting

Page 17: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Laminins• Found in basal laminae

– Special ECM– Under epithelial cells– Separates them from connective tissue

• Role of basal laminae– Support– Permeability barrier

• Contain– Type IV collagen– Proteoglycans– laminins

Page 18: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Laminins

• Very large proteins

• 3 linked peptides

• Multiple domains

Page 19: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 20: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

What binds the cells to the ECM?

Page 21: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Integrins

• Groups of transmembrane proteins

• Link cytoskeleton to ECM

• Fibronectin receptor is best known

Page 22: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 23: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Cell-cell interactions

Cell-cell adhesion

Cell-cell communication

Page 24: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Cell-cell adhesion

• Cell adhesion molecules (CAMs)– Lots of them– Involved in many cellular processes

• Cadherins– Adhesive glycoproteins

Page 25: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Cell juctions

• Adhesive junctions– Strong links

• Tight junctions– Prevent leaks between cells

• Gap junctions– Forms direct link between cells

Page 26: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 27: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Adhesive junctions

• Desmosomes• Hemidesmosomes• Adherens junctions• Focal adhesions

All contain- intracellular attachment proteins—link to cytoskeleton- transmembrane linker proteins—link the cells

Page 28: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 29: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Desmosomes—rivets between cells

Page 30: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 31: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Adherens junctions

• Belt around cell• Connects to actin, not

tonofilaments• Look a lot like

desmosomes• Found in

– Heart– Epithelial layers

• Oftern form belt

• Called “focal adhesion” if connects to ECM

Page 32: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Tight junctions

Page 33: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 34: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 35: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 36: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Gap junctions

• Direct electrical connection

• Formed by connexons– Protein=connexin

• Prominent in muscle and nerve—e.g. electrical tissues

• Form of cell-cell communication

Page 37: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 38: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Cell walls

Page 39: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Plant cell walls

• Cellulose (40%)• Branched polysaccharides

– Hemicellulose (20%)– Pectins (30%)

• Extensins--glycoproteins (10%)

• Lignins—woody tissues– Insoluble aromatic alcohols– Cross-link to form wood

Page 40: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.
Page 41: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.

Plasmodesmata

Page 42: How do coated vesicles go to the right place and fuse with the right membrane? The “SNARE” hypothesis.