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Hans-Hermann Frese [email protected] Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem
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Hans-Hermann Frese [email protected] Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Apr 05, 2015

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Page 1: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Hans-Hermann Frese [email protected] für Informationstechnik BerlinTakustraße 714195 Berlin-Dahlem

Page 2: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Konrad-Zuse-Zentrum für Informationstechnik in Berlin-Dahlem

Page 3: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Konrad-Zuse-Zentrum für Informationstechnik Berlin

founded in 1984 by the Senate of Berlin:

“Gesetz über das Zentrum für Informationstechnik (ZInfG)”

“Dual Concept”

SC: scientific computing

CS: computer science & computer services

~200 staff members inclusive students and regular guests

Page 4: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

The Roots: Konrad Zuse

1938: Zuse Z1, first programmable mechanical computer

destroyed in World War II

1941: Zuse Z3, first programmable electromagnetic computer

2000 relays, 1/3 Flop/s

Z1 has many features of a modern computer:

• freely programmable• separate memory• control unit with

micro sequencer• floating point arithmetic

Konrad Zuse1920 - 1995

Page 5: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Konrad-Zuse Zentrum für Informationstechnik Berlin ZIB

Konrad Zuse (middle) discussing the plans for the new ZIB building with the President and Vice President of ZIB

Page 6: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

ZIB Management

• Peter Deuflhard (1986, President), Numerical MethodsFreie Universität Berlin

• Martin Grötschel (1991, Vice-President), Discrete MethodsTechnische Universität Berlin

• Alexander Reinefeld (1998), Computer Science Humboldt-Universität zu Berlin

• Henry Thieme (1990), Administration

Page 7: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Scientific ComputingPeter DeuflhardMartin Grötschel

VerwaltungsratFreie Universität Berlin (FUB)

Humboldt-Universität Berlin (HU)Technische Universität Berlin (TUB)

Bundesanstalt für Materialforschung und -prüfung (BAM)Hahn-Meitner-Institut Berlin (HMI)

Max-Delbrück-Centrum für Molekulare Medizin (MDC)Senat von Berlin - Wissenschafts- und Wirtschaftsverwaltg

Wissenschaftlicher BeiratW. Büttner MünchenH.-J. Lichtfuß BerlinTh. Liebling LausanneA.K. Louis SaarbrückenJ. Römelt LeverkusenK.-V. von Schöning BerlinB. Winter Düsseldorf

PresidentPeter Deuflhard

Vice PresidentMartin Grötschel

AdministrationHenry Thieme

Computer ScienceAlexander Reinefeld

ZulassungsausschußW. Koch BerlinV. Linke BerlinJ. Manz BerlinF. Thiele BerlinD. Stauffer KölnU. Wolff BerlinL. Zülicke Potsdam

ZIB Organisation Chart

Page 8: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

The Two Faces of ZIB CS

Computer Services

• Supercomputing Services

Cray T3E

Mass Storage

• User Consulting

efficient use of HPC

networking

Computer Science Research

• Architecture

SAN interconnects

• Middleware

distributed HPC computing

resource management

• Demonstrator Applications

bioinformatics

Page 9: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Computer Science

A. Reinefeld

Computer Science

A. Reinefeld

Operating

R. Götz

Operating

R. Götz

Supercomputer OperationAccounting and StatisticsBackup Services

Supercomputer OperationAccounting and StatisticsBackup Services

High-Performance Computing

H. Busch

High-Performance Computing

H. Busch

User SoftwareOperating Systems

User SoftwareOperating Systems

WAN ManagementBRAIN Office

WAN ManagementBRAIN Office

User ConsultingUser Consulting

Computer Science Research

A. Reinefeld

Computer Science Research

A. Reinefeld

Innovative ArchitecturesSystem SoftwareBenchmarking

Innovative ArchitecturesSystem SoftwareBenchmarking

MetacomputingMetacomputing

Internal Computer Services

W. Pyszkalski

Internal Computer Services

W. Pyszkalski

HW / SW InstallationService for Workstations and PCs

HW / SW InstallationService for Workstations and PCs

Network ServicesLAN Management

Network ServicesLAN Management

HW LaboratoryHW Laboratory

Page 10: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Delivered Computing Power

0,10

1,00

10,00

100,00

1000,00

84 87 90 93 96 99

GF

lop

/s

0,001

0,010

0,100

1,000

10,000

100,000

GB

yte

GFlop/s

GByte

T3E-900 LC 136

T3D SC 192

X-MP /24

T3D 256

T3E 402

Page 11: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

History

1987(32 MB) - 1992(128 MB) – 1994:

Cray X-MP/24, 2 CPUs• 1 Gbyte/s high speed channel

• I/O subsystem with 2 PEs

• solid state storage: 128 MWords

• 421 MFlop/s

1994 (192 PEs) - 1995 (256 PEs) – 1998:

Cray T3D SC-256(TOP1 in Germany, 1994 – 1996)

• 128 MB / node

• 34 GFlop/s

Page 12: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Current Systems

SGI Cray T3E, 384 (408) PEs

• 256 Alpha EV5.6 450 MHz

• 128 Alpha EV5.6 600 MHz

• 67 GB memory

• UNICOS/Mk

• F90, C, C++, HPF

• MPI, PVM, shmem

• 403 GFlop/s peak

Cray J932/16

• 16 CPU J90, 100 MHz

• 8 GB shared memory

• UNICOS

• F90, C, C++

• MPI, PVM, shmem

• 3 GFlop/s peak

Page 13: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Mass Storage @ ZIB

Two StorageTek Robots for max. 12,0000 cassettes

• cassettes & drives 1999: 3000 Redwood cassettes, 8 x STK SD3 ACS drives

capacity 50 GBbandwidth 15 MB/s mount/dismount: 45/45 sØ positioning time: 53 s

2000: 700 STK 9840 “Eagle” cassettes, 4 x STK 9310 ACS drivescapacity 20 GBbandwidth 10 MB/s mount/dismount: 13/11 sØ positioning time: 11 s

2001: x TC60 cassettes (> 60 GB) >10 drives

• migration software:

DMF (SGI/Cray)

• NetBackup (Veritas)

Page 14: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Mass Storage @ ZIB

STK operation,SUN with database

library management unit

Cray J90 8 GByte

Cray T3E, 408 PEs 67 GByte

Origin200

670 GByte disk

librarycontrolunit

50 GByte disk

SCSI, 10 - 16 MByte/s per drive

control path

Ethernet

4 Eagle2 Redwood

4 Redwood

2 Redwood

200 GByte disk

Page 15: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Cray J90Cray T3E

Konrad-Zuse-Zentrum für Informationstechnik Berlin

Operating CenterTape Robot

Page 16: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Power Users @ ZIB (2000)

• Physics & Astrophysics Quantum Chromodynamics (Linke, FU; Müller-Preußker, HU, Schierholz, DESY Zeuthen) Dust formation on long-periodic variables (Sedlmayr, TU) Computational relativity and relativistic astrophysics (Seidel, AEI-MPG, Golm/Potsdam )

• Chemistry Car-Parinello MD studies on metal surfaces (Christmann, FU) Ab initio calculations of transition metal enzymes (Lubitz, TU) Structure and reactivity of transition metal complexes (Schwarz, TU) Structure, dynamics and reactivity of large chemical systems (Sauer, HU) Quantum dynamics of molecules, clusters and adsorbate systems (Manz, FU)

• Fluid Dynamics LES and DNS in Complex Geometries (Thiele, TU; Kaltenbach, TU) Aerodynamic Design Simulation and Turbulence Modeling (Thiele, TU)

• Environmental Sciences Ocean Modeling (Kielmann, CAU Kiel) Climate-Middle Atmosphere Modeling (Labitzke, FU) LES for Atmospheric Flows (Raasch, Uni Hannover)

Page 17: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

BRAIN+: Berlin Research Area Information Network (managed by ZIB)

Page 18: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

Universität Kiel, Schleswig-HolsteinCRAY T90, 4 CPUs, 1 GByte (7 GFlop/s)CRAY SV1, 20 CPUs J90se (4 GFlop/s)Cray T3E-1200 AC 18

Universität Hannover, NiedersachsenFujitsu VPP 300, 4 CPUs, 8 GB (8 GFlop/s peak)CRAY T3E-900 AC 20 (18 GFlop/s)

Konrad-Zuse-Zentrum fürInformationstechnik BerlinCRAY T3E-900/1200, 386 nodes (403 GFlop/s)CRAY J90, 16 nodes (3 GFlop/s)

NVV - Norddeutscher Vektorrechnerverbund

Berlin, Niedersachsen, Schleswig-Holstein

“Co-ordinated investement and co-operative use of HPC”

Page 19: Hans-Hermann Frese frese@zib.de Konrad-Zuse-Zentrum für Informationstechnik Berlin Takustraße 7 14195 Berlin-Dahlem.

HLRN = “High-Performance Computer North”

• consortium of six northern German states: Berlin Bremen Hamburg Mecklenburg-Vorpommern Niedersachsen Schleswig-Holstein

• extension of NVV

• 70 Mio. DM for HPC complex Berlin/Hannover

• German Wissenschaftsrat says: “most innovative project in science

politics”