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SUMMARY OF V3D HACKATHON Guorong Wu University of North Carolina, Chapel Hill
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Page 1: Guorong Wu University of North Carolina, Chapel Hill.

SUMMARY OF V3D HACKATHON

Guorong WuUniversity of North Carolina, Chapel

Hill

Page 2: Guorong Wu University of North Carolina, Chapel Hill.

Motivations

Learn to use V3D Build up the platform for processing

medical image with V3D Write the V3D plugin

Page 3: Guorong Wu University of North Carolina, Chapel Hill.

Compile V3D in Windows

Compiled the V3D in windows Compiled the V3D plugins in windows Compiled the ITK-V3D plugins in windows

Page 4: Guorong Wu University of North Carolina, Chapel Hill.

Compile V3D in Windows

Always using MinGW as the C/C++ compiler

Always compile the code in release mode Rebuild ITK library with MinGW Check the version of Qt library

Page 5: Guorong Wu University of North Carolina, Chapel Hill.

Write V3D plugin

Diffeomorphic Demons (code has been checked in

v3d/hackathon2010)

Page 6: Guorong Wu University of North Carolina, Chapel Hill.
Page 7: Guorong Wu University of North Carolina, Chapel Hill.

Write V3D plugin

Template Subject

Page 8: Guorong Wu University of North Carolina, Chapel Hill.

Write V3D Plugin

Page 9: Guorong Wu University of North Carolina, Chapel Hill.

Write V3D Plugin

Demons Diffeomorphic Demons

Page 10: Guorong Wu University of North Carolina, Chapel Hill.

Research Cooperation

Test the registration of my lab on the flyer’s brain

Get the mice brain data form Karel’s lab

Page 11: Guorong Wu University of North Carolina, Chapel Hill.

Future Work Plan

Bench test on various registration algorithms

Build up the brain data processing pipeline in V3D

Skull stripping Tissue segmentation

Page 12: Guorong Wu University of North Carolina, Chapel Hill.

Future Work Plan Develop the semi-automatic volume-

surface registration method