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Genes and Genetic DiseasesGenes and Genetic Diseases
Genetics—the study of biologic heredityGenetics—the study of biologic heredity Gene—basic unit of heredityGene—basic unit of heredity
Genomics—the field of genetics concerned Genomics—the field of genetics concerned with the structural and functional studies of with the structural and functional studies of the genomethe genome Genome—DNA representing all of the genes for Genome—DNA representing all of the genes for
ChromosomeChromosome Temporary but consistent state of DNATemporary but consistent state of DNA Composed of two longitudinal sister chromatidsComposed of two longitudinal sister chromatids 1/10,000 as long as outstretched DNA1/10,000 as long as outstretched DNA
3 billion DNA base pairs per human cell3 billion DNA base pairs per human cell On average, humans vary on 3 million base pairsOn average, humans vary on 3 million base pairs
Human genome contains 20,000 to 25,000 Human genome contains 20,000 to 25,000 genesgenes
TranscriptionTranscription RNA is synthesized from the DNA template RNA is synthesized from the DNA template
via RNA polymerasevia RNA polymerase Results in the formation of mRNAResults in the formation of mRNA mRNA moves out of the nucleus and into mRNA moves out of the nucleus and into
the cytoplasmthe cytoplasm Gene splicingGene splicing
TranslationTranslation Process by which RNA directs the synthesis of Process by which RNA directs the synthesis of
a polypeptide via interaction with transfer RNAa polypeptide via interaction with transfer RNA Site of protein synthesis is the ribosomeSite of protein synthesis is the ribosome tRNA contains a sequence of nucleotides tRNA contains a sequence of nucleotides
(anticodon) complementary to the triad of (anticodon) complementary to the triad of nucleotides on the mRNA strand (codon)nucleotides on the mRNA strand (codon)
The ribosome moves along the mRNA The ribosome moves along the mRNA sequence to translate the amino acid sequence to translate the amino acid sequencesequence
CentromereCentromere RegionRegion of attachment of sister chromatidsof attachment of sister chromatids
TelomereTelomere Region containing multiple base pairsRegion containing multiple base pairs Shorten with each cell divisionShorten with each cell division
Diploid (2n) number in humans is 46Diploid (2n) number in humans is 46 Somatic cells contain the diploid number of Somatic cells contain the diploid number of
chromosomes (retained during mitosis)chromosomes (retained during mitosis) Gametes contain the haploid number of Gametes contain the haploid number of
chromosomes (occurs through meiosis)chromosomes (occurs through meiosis)
The first 22 of the 23 pairs of chromosomes in The first 22 of the 23 pairs of chromosomes in males and femalesmales and females
The two members are virtually identical and thus The two members are virtually identical and thus said to be homologoussaid to be homologous
Sex chromosomesSex chromosomes Remaining pair of chromosomesRemaining pair of chromosomes In females, it is a homologous pair (XX)In females, it is a homologous pair (XX) In males, it is a nonhomologous pair (XY)In males, it is a nonhomologous pair (XY)
Any inherited alteration of genetic materialAny inherited alteration of genetic material Chromosome aberrationsChromosome aberrations Base pair substitutionBase pair substitution
• One base pair is substituted for another; may result in change One base pair is substituted for another; may result in change in amino acid sequencein amino acid sequence
• Silent substitutionSilent substitution Does not result in an amino acid changeDoes not result in an amino acid change RNA codons GUU, GUC, GUA, GUG all code for the amino acid RNA codons GUU, GUC, GUA, GUG all code for the amino acid
Mutations in somatic cells are not Mutations in somatic cells are not transmitted to offspringtransmitted to offspring
Mutations in gametes are transmitted to Mutations in gametes are transmitted to offspringoffspring
Point mutationPoint mutation A single nucleotide base-pair change in DNAA single nucleotide base-pair change in DNA
Rates of spontaneous mutationRates of spontaneous mutation Varies per geneVaries per gene 1010-4-4 to 10 to 10-7-7 per gene per generation per gene per generation
A DNA sequence change that does not A DNA sequence change that does not change the amino acid sequence of a change the amino acid sequence of a genegene
A type of mutation that results in a single A type of mutation that results in a single amino acid change in the translated gene amino acid change in the translated gene productproduct
A type of mutation in which an mRNA stop A type of mutation in which an mRNA stop codon is:codon is: Produced, resulting in premature termination of Produced, resulting in premature termination of
the protein sequence the protein sequence oror Removed, resulting in an elongated protein Removed, resulting in an elongated protein
Cells that have a multiple of the normal number Cells that have a multiple of the normal number of chromosomes of chromosomes
Haploid and diploid cells are euploid forms Haploid and diploid cells are euploid forms When a euploid cell has more than the When a euploid cell has more than the
diploid number, it is called a polyploid cell diploid number, it is called a polyploid cell Triploidy: a zygote having three copies of each Triploidy: a zygote having three copies of each
chromosome (69)chromosome (69) Tetraploidy: four copies of each (92 total)Tetraploidy: four copies of each (92 total)
Triploid and tetraploid fetuses don’t surviveTriploid and tetraploid fetuses don’t survive
Normal separation of chromosomes during cell Normal separation of chromosomes during cell division division
NondisjunctionNondisjunction Usually the cause of aneuploidyUsually the cause of aneuploidy Failure of homologous chromosomes or sister Failure of homologous chromosomes or sister
chromatids to separate normally during meiosis chromatids to separate normally during meiosis or mitosisor mitosis
A somatic cell that does not contain a multiple of A somatic cell that does not contain a multiple of 23 chromosomes23 chromosomes
A cell containing three copies of one A cell containing three copies of one chromosome is trisomic (trisomychromosome is trisomic (trisomy))
Monosomy is the presence of only one copy of Monosomy is the presence of only one copy of any chromosomeany chromosome
Monosomy is often fatal, but infants can survive Monosomy is often fatal, but infants can survive with trisomy of certain chromosomes with trisomy of certain chromosomes • ““It is better to have extra than less”It is better to have extra than less”
Leading cause of mental retardation and Leading cause of mental retardation and miscarriagemiscarriage
Incidence of chromosomal abnormalitiesIncidence of chromosomal abnormalities 1/12 conceptions1/12 conceptions Approximately 95% of conceptions with Approximately 95% of conceptions with
chromosome disorders result in miscarriagechromosome disorders result in miscarriage 50% of first-trimester miscarriages associated with a 50% of first-trimester miscarriages associated with a
major chromosomal abnormalitymajor chromosomal abnormality 1/150 live births with a major diagnosable 1/150 live births with a major diagnosable
Sex Chromosome AneuploidySex Chromosome Aneuploidy Turner syndromeTurner syndrome
Females with only one X chromosomeFemales with only one X chromosome CharacteristicsCharacteristics
• Absence of ovaries (sterile)Absence of ovaries (sterile)• Short stature (~ 4Short stature (~ 4''77""))• Webbing of the neckWebbing of the neck• EdemaEdema• Underdeveloped breasts; wide nipples Underdeveloped breasts; wide nipples • High number of aborted fetusesHigh number of aborted fetuses• X is usually inherited from motherX is usually inherited from mother
Sex Chromosome AneuploidySex Chromosome Aneuploidy Klinefelter syndromeKlinefelter syndrome
Individuals with at least two Xs and one Y Individuals with at least two Xs and one Y chromosomechromosome
CharacteristicsCharacteristics• Male appearanceMale appearance• Develop female-like breastsDevelop female-like breasts• Small testesSmall testes• Sparse body hairSparse body hair• Long limbsLong limbs
Some individuals can be XXXY and XXXXY. Some individuals can be XXXY and XXXXY. The abnormalities will increase with each X.The abnormalities will increase with each X.
Alterations in Chromosome Alterations in Chromosome StructureStructure
TranslocationTranslocation Transfer of one chromosome segment to anotherTransfer of one chromosome segment to another
Ring chromosomeRing chromosome Structurally abnormal chromosome in which the Structurally abnormal chromosome in which the
telomere of each chromosome arm has been telomere of each chromosome arm has been deleted and the broken arms have joineddeleted and the broken arms have joined
Alterations in Chromosome Alterations in Chromosome StructureStructure
Chromosome breakageChromosome breakage If a chromosome break does occur, physiologic If a chromosome break does occur, physiologic
mechanisms usually repair the break, but the mechanisms usually repair the break, but the breaks often heal in a way that alters the structure breaks often heal in a way that alters the structure of the chromosomeof the chromosome
Agents of chromosome breakageAgents of chromosome breakage• Ionizing radiation, chemicals, and virusesIonizing radiation, chemicals, and viruses
Alterations in Chromosome Alterations in Chromosome StructureStructure
Breakage or loss of DNABreakage or loss of DNA Cri du chat syndromeCri du chat syndrome
““Cry of the cat”Cry of the cat” Deletion of short arm of chromosome 5 (5p-)Deletion of short arm of chromosome 5 (5p-) Low birth weight, metal retardation, and Low birth weight, metal retardation, and
Alterations in Chromosome Alterations in Chromosome StructureStructure
DuplicationDuplication A repeated gene or gene sequenceA repeated gene or gene sequence Rare occurrenceRare occurrence Less serious consequences because better to Less serious consequences because better to
have more genetic material than less (deletion)have more genetic material than less (deletion) Duplication in the same region as cri du chat Duplication in the same region as cri du chat
causes mental retardation but no physical causes mental retardation but no physical abnormalitiesabnormalities
Alterations in Chromosome Alterations in Chromosome StructureStructure
InversionsInversions Two breaks on a chromosomeTwo breaks on a chromosome Reversal of the gene orderReversal of the gene order Usually occurs from a breakage that gets reversed Usually occurs from a breakage that gets reversed
during reattachmentduring reattachment• ABCDEFG may become ABABCDEFG may become ABEDCEDCFGFG
Alterations in Chromosome Alterations in Chromosome StructureStructure
Fragile X syndromeFragile X syndrome Site on the long arm of the X chromosomeSite on the long arm of the X chromosome Associated with mental retardation; second in Associated with mental retardation; second in
occurrence to Down syndromeoccurrence to Down syndrome Higher incidence in males because they have only Higher incidence in males because they have only
Basic units of heredityBasic units of heredity Sequences of chromosomal DNA coding for Sequences of chromosomal DNA coding for
the production of a functional productthe production of a functional product Templates for mRNA that code for specific Templates for mRNA that code for specific
proteinsproteins All genes are contained in each cell of the All genes are contained in each cell of the
Locus: location occupied by a gene on a Locus: location occupied by a gene on a chromosomechromosome
Allele: alternate version of a gene at a locusAllele: alternate version of a gene at a locus Each individual possesses two alleles for each Each individual possesses two alleles for each
genegene Homozygous: possessing identical alleles of a Homozygous: possessing identical alleles of a
given genegiven gene Heterozygous: possessing two different alleles of Heterozygous: possessing two different alleles of
a given genea given gene PolymorphismPolymorphism
Locus that has two or more alleles that occur with Locus that has two or more alleles that occur with appreciable frequencyappreciable frequency
GeneticsGenetics Genotype (“what they have”)Genotype (“what they have”)
The genetic makeup of an organismThe genetic makeup of an organism Phenotype (“what they demonstrate”)Phenotype (“what they demonstrate”)
The observable, detectable, or outward appearance The observable, detectable, or outward appearance of the genetics of an organismof the genetics of an organism
Example Example A person with the A blood type could be AA or AO. A person with the A blood type could be AA or AO.
A is the phenotype; AA or AO is the genotype.A is the phenotype; AA or AO is the genotype.
If two alleles are found together, the allele that If two alleles are found together, the allele that is observable is dominant, and the one whose is observable is dominant, and the one whose effects are hidden is recessiveeffects are hidden is recessive
In genetics, the dominant allele is represented In genetics, the dominant allele is represented by a capital letter, and the recessive by a by a capital letter, and the recessive by a lowercase letterlowercase letter
Alleles can be codominantAlleles can be codominant
Recurrence riskRecurrence risk The probability that parents of a child with a genetic The probability that parents of a child with a genetic
disease will have yet another child with the same disease will have yet another child with the same diseasedisease
Recurrence risk of an autosomal dominant traitRecurrence risk of an autosomal dominant trait• When one parent is affected by an autosomal dominant When one parent is affected by an autosomal dominant
disease and the other is normal, the occurrence and disease and the other is normal, the occurrence and recurrence risks for each child are one halfrecurrence risks for each child are one half
Autosomal Dominant DisordersAutosomal Dominant Disorders Characteristics of autosomal dominant Characteristics of autosomal dominant
disordersdisorders Condition is expressed equally in males and Condition is expressed equally in males and
femalesfemales Approximately half of children of an affected Approximately half of children of an affected
heterozygous individual will express the heterozygous individual will express the conditioncondition• Homozygous affected individuals are rareHomozygous affected individuals are rare
The percentage of individuals with a specific The percentage of individuals with a specific genotype who also express the expected genotype who also express the expected phenotypephenotype Incomplete penetranceIncomplete penetrance
• Individual who has the gene for a disease but does not Individual who has the gene for a disease but does not express the disease express the disease
• Retinoblastoma (eye tumor in children) demonstrates Retinoblastoma (eye tumor in children) demonstrates incomplete penetrance (90%)incomplete penetrance (90%)
Expressivity is the variation in a phenotype Expressivity is the variation in a phenotype associated with a particular genotypeassociated with a particular genotype
This can be caused by modifier genesThis can be caused by modifier genes Examples:Examples:
von Recklinghausen diseasevon Recklinghausen disease• Autosomal dominantAutosomal dominant
• Long arm of chromosome 17Long arm of chromosome 17
• Disease varies from dark spots on the skin to malignant Disease varies from dark spots on the skin to malignant neurofibromas, scoliosis, gliomas, neuromas, etc.neurofibromas, scoliosis, gliomas, neuromas, etc.
Autosomal recessive disorderAutosomal recessive disorder Abnormal allele is recessive and a person must be Abnormal allele is recessive and a person must be
homozygous for the abnormal trait to express the homozygous for the abnormal trait to express the diseasedisease
The trait usually appears in the children, not the The trait usually appears in the children, not the parents, and it affects the genders equally because parents, and it affects the genders equally because it is present on a pair of autosomesit is present on a pair of autosomes
Autosomal recessive disorder recurrence riskAutosomal recessive disorder recurrence risk Recurrence risk of an autosomal dominant traitRecurrence risk of an autosomal dominant trait
• When two parents are carriers of an autosomal recessive When two parents are carriers of an autosomal recessive disease, the occurrence and recurrence risks for each disease, the occurrence and recurrence risks for each child are 25%child are 25%
CharacteristicsCharacteristics Condition expressed equally in males and femalesCondition expressed equally in males and females Affected individuals most often the offspring of Affected individuals most often the offspring of
asymptomatic heterozygous carrier parentsasymptomatic heterozygous carrier parents• Approximately 1/4 of offspring will be affected; 1/2 will be Approximately 1/4 of offspring will be affected; 1/2 will be
asymptomatic carriers; and 1/4 will be unaffectedasymptomatic carriers; and 1/4 will be unaffected• Individuals must be homozygous for the condition to be Individuals must be homozygous for the condition to be
expressedexpressed Generational skipping may be presentGenerational skipping may be present Consanguinity may be presentConsanguinity may be present
Mating of two related individualsMating of two related individuals Dramatically increases the recurrence risk of Dramatically increases the recurrence risk of
Disorders involve X and Y chromosomesDisorders involve X and Y chromosomes X-linked disorders usually expressed by males X-linked disorders usually expressed by males
because females have another X chromosome to because females have another X chromosome to mask the abnormal allelemask the abnormal allele Most are recessiveMost are recessive
Y-linked disorders uncommon because Y Y-linked disorders uncommon because Y chromosome contains relatively few geneschromosome contains relatively few genes Father-son transmission presentFather-son transmission present No father-daughter transmission No father-daughter transmission
CharacteristicsCharacteristics Males most commonly affectedMales most commonly affected
• Affected males cannot transmit the genes to sons, but Affected males cannot transmit the genes to sons, but they can to all daughtersthey can to all daughters
Unaffected carrier femalesUnaffected carrier females• Sons of female carriers have a 50% risk of being Sons of female carriers have a 50% risk of being
affectedaffected
Pedigree analysisPedigree analysis• Generational skipping often presentGenerational skipping often present
• No father-to-son transmissionNo father-to-son transmission
A.A. Outcomes for offspring of an Outcomes for offspring of an unaffected father and a unaffected father and a heterozygous unaffected carrier heterozygous unaffected carrier mother (most common scenario)mother (most common scenario)
B.B. Outcomes for offspring of an Outcomes for offspring of an affected father and a homozygous affected father and a homozygous unaffected motherunaffected mother
C.C. Outcomes for offspring of an Outcomes for offspring of an affected father and a heterozygous affected father and a heterozygous unaffected carrier mother unaffected carrier mother
HemophiliaHemophilia Bleeding disorders resulting from a congenital Bleeding disorders resulting from a congenital
deficiency of coagulation factorsdeficiency of coagulation factors• Hemophilia A: factor VIII deficiencyHemophilia A: factor VIII deficiency
20.6/100,000 male births in U.S.20.6/100,000 male births in U.S.
• Hemophilia B: factor IX deficiencyHemophilia B: factor IX deficiency 5.3/100,000 male births in U.S.5.3/100,000 male births in U.S.
Mutations associated with factor VIII deficiency:Mutations associated with factor VIII deficiency:• Large deletions or insertions, frameshift and splice Large deletions or insertions, frameshift and splice
junction changes, and nonsense and missense junction changes, and nonsense and missense mutationsmutations
• Mutations vary across families but tend to be similar Mutations vary across families but tend to be similar within familieswithin families
Characteristics of multifactorial disordersCharacteristics of multifactorial disorders Result from hereditary and environmental Result from hereditary and environmental
factorsfactors Hereditary component is polygenicHereditary component is polygenic
• Individual involved genes follow mendelian principlesIndividual involved genes follow mendelian principles• Many genes act together to influence the expressed Many genes act together to influence the expressed
Twin studies and concordanceTwin studies and concordance Genetic conditionsGenetic conditions
• Monozygotic (MZ) twins: 100% concordanceMonozygotic (MZ) twins: 100% concordance• Dizygotic (DZ) twins: less than 100% and similar to Dizygotic (DZ) twins: less than 100% and similar to
that among other siblingsthat among other siblings Environmental conditionsEnvironmental conditions
• Equal concordance rates among MZ and DZ twinsEqual concordance rates among MZ and DZ twins Multifactorial conditionsMultifactorial conditions
• MZ twins with greater concordance than DZ twins, but MZ twins with greater concordance than DZ twins, but rates are not 100%rates are not 100%