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Electron transport chain,oxidative phosphorylation & mitochondrial transport systems. M.Kohutiar, B.Sopko
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Electron transport chain,oxidative phosphorylation ...

Apr 22, 2022

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Page 1: Electron transport chain,oxidative phosphorylation ...

Electron transport chain,oxidative phosphorylation & mitochondrial

transport systems.

M.Kohutiar, B.Sopko

Page 2: Electron transport chain,oxidative phosphorylation ...

Content

1. Structure of mitochondriaMitochondrial transport systems

2. Electron transport3. Parts of Electron transport chain4. Proton gradient and synthesis of ATP5. Uncoupling

Page 3: Electron transport chain,oxidative phosphorylation ...

Metabolism ANABOLIC CATABOLIC

ΔG < 0 G < 0 ΔG < 0 G > 0

Page 4: Electron transport chain,oxidative phosphorylation ...

Gain of electron transport chain

O6H6CO6OOHC 2226126

molkJG /2823´0

Page 5: Electron transport chain,oxidative phosphorylation ...

Gain of electron transport chain

OHNADO2

1HNADH 22

n(ATP))P n(ADP i

Page 6: Electron transport chain,oxidative phosphorylation ...

Gain of electron transport chain

O6H6CO6OOHC 2226126

molkJG /2823´0

24e24H6CO6OOHC 226126

O12H24e24H6O 22

Page 7: Electron transport chain,oxidative phosphorylation ...

Gain of electron transport chain

COMPLEX I

COMPLEX II

COMPLEX III

COMPLEX IV

CoQ

cytochrome c

NADH

FADH2

-0,4

0,8

Page 8: Electron transport chain,oxidative phosphorylation ...

Gain of electron transport chain

COMPLEX I

COMPLEX II

COMPLEX III

COMPLEX IV

CoQ

cytochrome c

NADH

FADH2

-0,4

0,8

Page 9: Electron transport chain,oxidative phosphorylation ...

Gain of electron transport chain

COMPLEX I

COMPLEX II

COMPLEX III

COMPLEX IV

CoQ

cytochrome c

NADH

FADH2

-0,4

0,8 ΔE°´ > 0

Page 10: Electron transport chain,oxidative phosphorylation ...

Gain of electron transport chain

OHNADO2

1HNADH 22

n(ATP))P n(ADP i

COMPLEX I

COMPLEX II

COMPLEX III

COMPLEX IV

CoQ

cytochrome c

NADH

FADH 2

-0,4

0,8

Page 11: Electron transport chain,oxidative phosphorylation ...

GLYCOLYSIS

glucose

glucose-6-phosphate

glyceraldehyde-3-phosphate

1,3-bisphosphoglycerate

pyruvate

acetyl-CoA

NAD+

NADH

NAD+

NADH

Page 12: Electron transport chain,oxidative phosphorylation ...

isocitrate

2-oxoglutarate

sukcinyl-CoA

fumarate

malate

sukcinate

ocalacetate

citrate

NAD+

NAD+

NAD+

NADH

NADH

NADH

FADH2

FAD

CITRATE

CYCLE

acetyl-CoA

GLYCOLYSIS

glucose

glucose-6-phosphate

glyceraldehyde-3-phosphate

1,3-bisphosphoglycerate

pyruvate

acetyl-CoA

NAD+

NADH

NAD+

NADH

Page 13: Electron transport chain,oxidative phosphorylation ...

Mitochondrial anatomy

Page 14: Electron transport chain,oxidative phosphorylation ...
Page 15: Electron transport chain,oxidative phosphorylation ...

ATP – ADP translocase

Page 16: Electron transport chain,oxidative phosphorylation ...

Cofactors structure

Page 17: Electron transport chain,oxidative phosphorylation ...
Page 18: Electron transport chain,oxidative phosphorylation ...
Page 19: Electron transport chain,oxidative phosphorylation ...

Glycerolphosphate shuttle

CH2

CH

CH2

OH

OH

O P

CH2

C

CH2

O

OH

O P

cytosol mitochondria

glycerol-3-phosphate

dihydroxyacetone phosphate

NADH

NAD+

mitochondria

Page 20: Electron transport chain,oxidative phosphorylation ...

CH2

CH

CH2

OH

OH

O P

CH2

CH

CH2

OH

OH

O P

CH2

C

CH2

O

OH

O P

CH2

C

CH2

O

OH

O P

cytosol mitochondria

glycerol-3-phosphate glycerol-3-phosphate

dihydroxyaceton phosphatedihydroxyacetone phosphate

NADH

NAD+ FAD

FADH2

Glycerolphosphate shuttle

mitochondria

Page 21: Electron transport chain,oxidative phosphorylation ...

Malate-aspartate shuttle

CH

CH2

COOH

COOH

OH

cytosol mitochondria

malate

C

CH2

COOH

COOH

ONADH

NAD+

MDH

oxalacetate

mitochondria

Page 22: Electron transport chain,oxidative phosphorylation ...

CH

CH2

COOH

COOH

OH

cytosol mitochondria

malate

CH

CH2

COOH

COOH

OH

C

CH2

COOH

COOH

OC

CH2

COOH

COOH

ONADH

NAD+

NADH

NAD+

MDH MDH

malate

oxalacetate oxalacetate

Malate-aspartate shuttlemitochondria

Page 23: Electron transport chain,oxidative phosphorylation ...

CH

CH2

COOH

COOH

OH

cytosol mitochondria

malate

CH

CH2

COOH

COOH

OH

C

CH2

COOH

COOH

OC

CH2

COOH

COOH

O

COOH

C

(CH2)2

COOHO

NADH

NAD+

NADH

NAD+

MDH MDH

Glu

AspAST

malate

oxalacetate oxalacetate

ketoglutarate

Malate-aspartate shuttlemitochondria

Page 24: Electron transport chain,oxidative phosphorylation ...

CH

CH2

COOH

COOH

OH

cytosol mitochondria

malate

CH

CH2

COOH

COOH

OH

C

CH2

COOH

COOH

OC

CH2

COOH

COOH

O

COOH

C

(CH2)2

COOHOCOOH

C

(CH2)2

COOHO

NADH

NAD+

NADH

NAD+

MDH MDH

Glu

Asp

Glu

AspASTAST

malate

oxalacetate oxalacetate

a-ketoglutaratea-ketoglutarate

Malate-aspartate shuttlemitochondria

Page 25: Electron transport chain,oxidative phosphorylation ...

Electron transport

V32,0E NADH2eHNAD 0´

0,82VE OH2e2HO2

1 0´22

Page 26: Electron transport chain,oxidative phosphorylation ...

Electron transport

V32,0E NADH2eHNAD 0´

0,82VE OH2e2HO2

1 0´22

V 1,14(-0,32)-0,82E0´

kJ/mol 2201,14F2zFΔFFΔFG 0´0´

Page 27: Electron transport chain,oxidative phosphorylation ...

Electron transport

kJ/mol 30,5ΔFG ATPPADP 0´

Page 28: Electron transport chain,oxidative phosphorylation ...

Electron transport

kJ/mol 30,5ΔFG ATPPADP 0´

42%100218

30,53

Page 29: Electron transport chain,oxidative phosphorylation ...

Electron transport

kJ/mol 30,5ΔFG ATPPADP 0´

42%100218

30,53

V 0,162F-

30500

zF

ΔFGΔFE

0´0´

Page 30: Electron transport chain,oxidative phosphorylation ...

Electron transport

kJ/mol -69,5ΔFG

V 0,36ΔFE CoQ NADHCoQNAD0´

0´redox

Page 31: Electron transport chain,oxidative phosphorylation ...

Electron transport

kJ/mol -36,7ΔFG

V 0,19ΔFE cytCCoQcytCCoQ0´

0´redoxoxred

kJ/mol -69,5ΔFG

V 0,36ΔFE CoQ NADCoQNADH0´

redox

Page 32: Electron transport chain,oxidative phosphorylation ...

Electron transport

kJ/mol -69,5ΔFG

V 0,36ΔFE CoQ NADCoQNADH0´

redox

kJ/mol -36,7ΔFG

V 0,19ΔFE cytCCoQcytCCoQ0´

0´redoxoxred

kJ/mol -112ΔFG

V 0,58ΔFE OHcytCO2

1cytC

0´2ox2red

Page 33: Electron transport chain,oxidative phosphorylation ...

Electron transport

kJ/mol -2,9ΔFG

V 0,015ΔFE CoQ FADCoQFADH0´

0´redox2

Page 34: Electron transport chain,oxidative phosphorylation ...

COMPLEX I

COMPLEX II

COMPLEX III

COMPLEX IV

CoQ

cytochrome c

NADH

FADH 2

-0,4

0,8

Page 35: Electron transport chain,oxidative phosphorylation ...

COMPLEX I

COMPLEX II

COMPLEX III

COMPLEX IV

CoQ

cytochrome c

NADH

FADH 2

-0,4

0,8

ADP

ATP

ADP

ADP

ATP

ATP

Page 36: Electron transport chain,oxidative phosphorylation ...

COMPLEX I

COMPLEX II

COMPLEX III

COMPLEX IV

CoQ

cytochrome c

NADH

FADH 2

-0,4

0,8

ADP

ATP

ADP

ADP

ATP

ATP

rotenone

antimycin A

cyanide

Page 37: Electron transport chain,oxidative phosphorylation ...

2 3

4 5

6

1[O2]

èasTime

Page 38: Electron transport chain,oxidative phosphorylation ...

2 3

4 5

6

1[O2]

Time

NAD+

Page 39: Electron transport chain,oxidative phosphorylation ...

2 3

4 5

6

1[O2]

èas

NAD+

rotenon

Page 40: Electron transport chain,oxidative phosphorylation ...

2 3

4 5

6

1[O2]

time

NAD+

rotenone

FADH 2

Page 41: Electron transport chain,oxidative phosphorylation ...

2 3

4 5

6

1[O2]

Time

NAD+

rotenone

FADH 2 antimycin A

Page 42: Electron transport chain,oxidative phosphorylation ...

2 3

4 5

6

1[O2]

Time

NAD+

rotenone

FADH 2 antimycin A

cyanide

Page 43: Electron transport chain,oxidative phosphorylation ...

Components of electron transport chainComplex I: NADH ubiquinonreductase

kJ/mol -69,5ΔFG

V 0,36ΔFE CoQ NADCoQNADH0´

redox

Page 44: Electron transport chain,oxidative phosphorylation ...

FeS centres

Page 45: Electron transport chain,oxidative phosphorylation ...

Components of electron transport chainComplex II: succinate ubiquinon reductase

kJ/mol -2,9ΔFG

V 0,015ΔFE CoQ FADCoQFADH0´

0´redox2

Page 46: Electron transport chain,oxidative phosphorylation ...

Components of electron transport chainComplex III:ubiquinol-cytC-reductase

kJ/mol -36,7ΔFG

V 0,19ΔFE cytCCoQcytCCoQ0´

0´redoxoxred

Page 47: Electron transport chain,oxidative phosphorylation ...

Cytochromes

Page 48: Electron transport chain,oxidative phosphorylation ...

Components of electron transport chainComplex IV: cytochrome c oxidase

O2H)c(Fecyt 4O4H)c(Fecyt 4 23

22

Page 49: Electron transport chain,oxidative phosphorylation ...

Oxidative phosphorylationchemiosmotic theory (Mitchell)

• OXPHOS requires intact mitochondrial membrane

• Inner membrane is impermeable for some ions• Electron transport is accompanied by transport

of H+, and development of measurable gradient• Compounds which increase the membrane

permeability do not affect the electron chain but inhibit ATP synthesis

Page 50: Electron transport chain,oxidative phosphorylation ...

H+

H+

H+

H+

low H+

high H+

ADP ATP

++++ ++++ ++++ ++++ ++++ ++++

---- ---- ---- ---- ---- ----

Page 51: Electron transport chain,oxidative phosphorylation ...

Proton gradient

kJ/mol 21,5ΔFG zFΔF]pH[pHRTΔFG 0´exin

Page 52: Electron transport chain,oxidative phosphorylation ...

Proton gradient

kJ/mol 21,5ΔFG zFΔF]pH[pHRTΔFG 0´exin

Cytosolic side

Page 53: Electron transport chain,oxidative phosphorylation ...

Mechanism of redox loop

QH2

QH.

H+

e-

matrixinner membraneInterimemb.

space

Page 54: Electron transport chain,oxidative phosphorylation ...

Mechanism of redox loopmatrixinner membrane

Interimemb.space

QH2QH2

QH.

H+

e-

Page 55: Electron transport chain,oxidative phosphorylation ...

Mechanism of redox loopmatrixinner membrane

Interimemb.space

QH2QH2

QH.

QH.

H+

H+

e-

cyt bk

e-

Page 56: Electron transport chain,oxidative phosphorylation ...

Mechanism of redox loopmatrixinner membrane

Mezimemb.prostor

QH2QH2

Q

QH.

QH.

H+

H+

H+

cyt c

e-

e-

cyt bk

e-

Page 57: Electron transport chain,oxidative phosphorylation ...

Mechanism of redox loopmatrixinner membrane

Interimemb.space

QH2QH2

Q Q

QH.

QH.

H+

H+

H+

cyt c

e-

e-

cyt bk

e-

Page 58: Electron transport chain,oxidative phosphorylation ...

Mechanism of redox loopmatrixinner membrane

Interimemb.space

QH2QH2

Q Q

QH.

QH.

H+

H+

H+

cyt c

e-

e-

cyt bk

e-

e-

cyt bT

Page 59: Electron transport chain,oxidative phosphorylation ...

Mechanism of redox loopmatrixinner membrane

Interimemb.space

QH2QH2

Q Q

QH.

H+

H+

H+

cyt c

e-

e-

cyt bk

cyt bT

e-

e-

e-

H+

QH.

Page 60: Electron transport chain,oxidative phosphorylation ...

Structure of Complex V

Page 61: Electron transport chain,oxidative phosphorylation ...

3D Structure of Complex V

Page 62: Electron transport chain,oxidative phosphorylation ...

Schematic Structure of Complex V

Page 63: Electron transport chain,oxidative phosphorylation ...

Dam

Page 64: Electron transport chain,oxidative phosphorylation ...

Dam

Page 65: Electron transport chain,oxidative phosphorylation ...

Protonmotiv force and ATP synthesis

Page 66: Electron transport chain,oxidative phosphorylation ...

ATP synthesis

Page 67: Electron transport chain,oxidative phosphorylation ...

Regulation of oxidative phosphorylation

ATPccyt NAD2

1PADPccyt NADH

2

1 2i

3

Page 68: Electron transport chain,oxidative phosphorylation ...

Regulation of oxidative phosphorylation

ATPccyt NAD2

1PADPccyt NADH

2

1 2i

3

ADP

P.ADP

ccyt

ccyt

NADH

NADK i

3

22

1

Page 69: Electron transport chain,oxidative phosphorylation ...

Regulation of oxidative phosphorylation

ATPccyt NAD2

1PADPccyt NADH

2

1 2i

3

KATP

ADP.P

NAD

NADH

ccyt

ccyt i

2

1

3

2

i

3

22

1

P.ADPATP

ccyt ccyt

NADHNAD

K

Page 70: Electron transport chain,oxidative phosphorylation ...

Uncoupling

Page 71: Electron transport chain,oxidative phosphorylation ...

Aerobic vs. Anaerobic ATP production

Oxidation of 2 e- NADH ……. 2,5 mol ATP with consumption of 0,5 mol O2

1 mol of the substrate is oxidised via Complexes I, III, and IV

Oxidation of 2 e- FADH2 …… 1,5 mol ATP1 mol of the substrate is oxidised via Complexes II, III a IV

Total oxidation of 1 mol of glucose yields 30 – 32 mol ATP,