ECTOPARASITE FAUNA OF RODENTS AND SCANDENTS IN . DIFFERENT ECOLOGICAL HABITATS AND ITS POTENTIAL ZOONOTIC IMPLICATIONS IN MALAYSIA Madinah Blnti Adrus Master of Science 2012
ECTOPARASITE FAUNA OF RODENTS AND SCANDENTS IN DIFFERENT ECOLOGICAL HABITATS AND ITS POTENTIAL
ZOONOTIC IMPLICATIONS IN MALAYSIA
Madinah Blnti Adrus
Master of Science 2012
Pusat Khidmat MakJumat Akademik ALAYSIA SA Atlt
ECTOPARASTE FAUNA OF RODENTS AND SCANDENTS IN DIFFERENT ECOLOGICAL HABITATS AND ITS POTENTIAL
ZOONOTIC IMPLICATIONS IN MALAYSIA
MADINAH BINTI ADRUS
A thesis submitted in fulfillment of the requirement for the Degree of
Master of Science
Faculty of Resource Science and Technology UNIVERSITI MALAYSIA SARAWAK
2012
DECLARATION
I hereby declare that all the work presented in the thesis is entirely my own work and has not
been submitted in support of an application for another degree or qualification to this or any
other university or institute of higher learning
(Madinah Binti Adrus)
Date
ii
DEDICATION
I dedicate my work to my beloved parents family mentors and all my loving
friends
111
ACKNOWLEDGEMENT
Alhamdullilah and thank Allah SWT for the bless and grace given to me for completing this
thesis successfully First of all I would like to thank my principle supervisor Professor Dr
Fatimah Abang and my co-supervisors Dr Mariana Ahamad and Professor Dr Mohd
Tajuddin Abdullah for their guidance encouragement advice concern support and
constructive comments during this study
I would like to thank the Faculty of Resource Science and Technology Universiti Malaysia
Sarawak (UNIMAS) and the Institute for Medical Research Kuala Lumpur (lMR) giving me
the various logistic and administrative supports during this study Without the collaboration
between Universiti Malaysia Sarawak (UNIMAS) and Institute for Medical Research Kuala
Lumpur (IMR) this study could not be completed successfully I really appreciated the
experience and knowledge gained during my training in acarology module diploma in
applied parasitology and entomology course and identification of acarine ectoparasites at
Institute Medical Research Kuala Lumpur (21 July -7 August 2009) All knowledge and
experience from the training were very useful to complete this study
I would like to thank UNIMAS for granting me the Zamalah scholarship 2009111 for my
postgraduate financial support This study was mostly supported from the research project
funded by a UNIMAS top-down grant on the zoonosis and EID [E14006 IF07 106 IZRC 103
12007 (03)] and FRGSOl(23)17661201O(47) led by Professor Dr Mohd Tajuddin Abdullah
and colleagues I would also like to thank Sarawak Forestry Corporation and Sarawak
Forestry Department for granting permission under the State Wild Life Protection Rules 1998
and permit number NCCD 9074(IV)29 to enter and collect sample in protected areas in
Sarawak use the faci tities and conduct research and warm hospitality during the field
IV
1
sampling My thanks also go to the Department of Wildlife and National Park (DWNP)
Kuala Lumpur Sabah Wildlife Department and Sabah Forest Department Kota Kinabalu
Sabah for their kind hospitality during my study in Peninsular Malaysia and Sabah
Within two years I have been fortunate to learn about the meaning of friendship I would like
to thank all members of the Department of Zoology Mr Wahap Marni Mr Mohd lalani
Mortada Mr Isa Sait Mr Huzal Irwan Husin Mr Trevor Allen and Mr Besar Keto for
their hard work and assistance throughout this study Besides that special thanks to Mrs
Halimaton Ibrahim Mr Mohd Kulaimi Bujang and all staff in the Acarology Unit of Institute
for Medical Research (lMR) for their guidance during the acarology training
To the Department of Zoology colleagues Muhamad Ikhwan Idris Kishen Bunya
Christharina Gintoron Irene Christianus Roberta Chaya Tawie Mohd Ridwan Abd
Rahman Pang Sing Tyan Sigit Wirantoro Nor Haliza Hasan Eileen ak Lit Mohd Fizl Sidq
Nur Salmizar Zahirunisa Abdul Rahim Debby Lim Siti Zuriani Ismail Wan Nurainie Wan
Ismail Farhana Anwarali Khan Badiozaman Sulaiman Mohd HanifRidzuan Mat Daud Nur
Aida Tamrin and Mr Faisal Anwarali Khan I wish to thank them for their wonderful
friendship for the great times shared knowledge and support
I would like to take this opportunity to thank those who are closest to me Firstly my loving
father Adrus Bakarudin and mother Rohana Hj 10lhi whose tender support and prayers and
to my brothers Fadillah Hussien and Abdul Ar-Razzaaq who always motivate me in
completing this thesis Therefore finally I dedicated this thesis for them
v
ABSTRACT
Field surveys of ectoparasites on Rodentia and Scandentia were conducted in 16 different
locations in Malaysia from June 2008 to May 20 I O The objectives of this study were to
determine the taxonomic composition of ectoparasites on Rodentia and Scandentia to
determine the relationship between ecological diversity and the host-parasite in different
types of ecological habitat in Malaysia and to examine whether the presence of ectoparasites
(ticks) have any potential health risks of rickettsial disease to local communities living
around the study area A total of 142 small mammals comprising of four species of squirrels
(Sciuridae) 12 species of rats (Muridae) and seven species of treeshrews (Tupaiidae) were
captured and examined for ectoparasites The hosts were derived from two orders namely
Rodentia (Sciuridae and Muridae) and Scandentia (Tupaiidae) The majority of these captures
was predominated by the Mullers rat (Sundamys muelleri) followed by Brown spiny rat
(Maxomys rajah) and Common treeshrew (Tupaia glis) Of these hosts six groups of
ectoparasites were recovered in this study namely ticks mesostigmatid listrophorid
chiggers lice and itch mites Two orders (Acarina and Anoplura) and seven families of
ectoparasites were present in this study namely Ixodidae Laelaptidae Trombiculidae
Atopomelidae Sarcoptidae Hoplopleuridae and Polyplacidae Twenty-three genera with 47
species of ectoparasites of Rodentia and Scandentia were recorded The ectoparasites were
sampled from all the seven types of habitats namely secondary forest lowland dipterocarp
forest riverine forest peat swamp mixed dipterocarp forest hill dipterocarp forest and
limestone forest Among the 16 localities secondary forest recorded the highest number of
host caught ectoparasites collected and with high infestation while the limestone forest was
found to have the highest number of host species and ectoparasite species compared to the
other five habitats Among the ectoparasites found Dermacentor sp Haemaphysalis sp
VI
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
Pusat Khidmat MakJumat Akademik ALAYSIA SA Atlt
ECTOPARASTE FAUNA OF RODENTS AND SCANDENTS IN DIFFERENT ECOLOGICAL HABITATS AND ITS POTENTIAL
ZOONOTIC IMPLICATIONS IN MALAYSIA
MADINAH BINTI ADRUS
A thesis submitted in fulfillment of the requirement for the Degree of
Master of Science
Faculty of Resource Science and Technology UNIVERSITI MALAYSIA SARAWAK
2012
DECLARATION
I hereby declare that all the work presented in the thesis is entirely my own work and has not
been submitted in support of an application for another degree or qualification to this or any
other university or institute of higher learning
(Madinah Binti Adrus)
Date
ii
DEDICATION
I dedicate my work to my beloved parents family mentors and all my loving
friends
111
ACKNOWLEDGEMENT
Alhamdullilah and thank Allah SWT for the bless and grace given to me for completing this
thesis successfully First of all I would like to thank my principle supervisor Professor Dr
Fatimah Abang and my co-supervisors Dr Mariana Ahamad and Professor Dr Mohd
Tajuddin Abdullah for their guidance encouragement advice concern support and
constructive comments during this study
I would like to thank the Faculty of Resource Science and Technology Universiti Malaysia
Sarawak (UNIMAS) and the Institute for Medical Research Kuala Lumpur (lMR) giving me
the various logistic and administrative supports during this study Without the collaboration
between Universiti Malaysia Sarawak (UNIMAS) and Institute for Medical Research Kuala
Lumpur (IMR) this study could not be completed successfully I really appreciated the
experience and knowledge gained during my training in acarology module diploma in
applied parasitology and entomology course and identification of acarine ectoparasites at
Institute Medical Research Kuala Lumpur (21 July -7 August 2009) All knowledge and
experience from the training were very useful to complete this study
I would like to thank UNIMAS for granting me the Zamalah scholarship 2009111 for my
postgraduate financial support This study was mostly supported from the research project
funded by a UNIMAS top-down grant on the zoonosis and EID [E14006 IF07 106 IZRC 103
12007 (03)] and FRGSOl(23)17661201O(47) led by Professor Dr Mohd Tajuddin Abdullah
and colleagues I would also like to thank Sarawak Forestry Corporation and Sarawak
Forestry Department for granting permission under the State Wild Life Protection Rules 1998
and permit number NCCD 9074(IV)29 to enter and collect sample in protected areas in
Sarawak use the faci tities and conduct research and warm hospitality during the field
IV
1
sampling My thanks also go to the Department of Wildlife and National Park (DWNP)
Kuala Lumpur Sabah Wildlife Department and Sabah Forest Department Kota Kinabalu
Sabah for their kind hospitality during my study in Peninsular Malaysia and Sabah
Within two years I have been fortunate to learn about the meaning of friendship I would like
to thank all members of the Department of Zoology Mr Wahap Marni Mr Mohd lalani
Mortada Mr Isa Sait Mr Huzal Irwan Husin Mr Trevor Allen and Mr Besar Keto for
their hard work and assistance throughout this study Besides that special thanks to Mrs
Halimaton Ibrahim Mr Mohd Kulaimi Bujang and all staff in the Acarology Unit of Institute
for Medical Research (lMR) for their guidance during the acarology training
To the Department of Zoology colleagues Muhamad Ikhwan Idris Kishen Bunya
Christharina Gintoron Irene Christianus Roberta Chaya Tawie Mohd Ridwan Abd
Rahman Pang Sing Tyan Sigit Wirantoro Nor Haliza Hasan Eileen ak Lit Mohd Fizl Sidq
Nur Salmizar Zahirunisa Abdul Rahim Debby Lim Siti Zuriani Ismail Wan Nurainie Wan
Ismail Farhana Anwarali Khan Badiozaman Sulaiman Mohd HanifRidzuan Mat Daud Nur
Aida Tamrin and Mr Faisal Anwarali Khan I wish to thank them for their wonderful
friendship for the great times shared knowledge and support
I would like to take this opportunity to thank those who are closest to me Firstly my loving
father Adrus Bakarudin and mother Rohana Hj 10lhi whose tender support and prayers and
to my brothers Fadillah Hussien and Abdul Ar-Razzaaq who always motivate me in
completing this thesis Therefore finally I dedicated this thesis for them
v
ABSTRACT
Field surveys of ectoparasites on Rodentia and Scandentia were conducted in 16 different
locations in Malaysia from June 2008 to May 20 I O The objectives of this study were to
determine the taxonomic composition of ectoparasites on Rodentia and Scandentia to
determine the relationship between ecological diversity and the host-parasite in different
types of ecological habitat in Malaysia and to examine whether the presence of ectoparasites
(ticks) have any potential health risks of rickettsial disease to local communities living
around the study area A total of 142 small mammals comprising of four species of squirrels
(Sciuridae) 12 species of rats (Muridae) and seven species of treeshrews (Tupaiidae) were
captured and examined for ectoparasites The hosts were derived from two orders namely
Rodentia (Sciuridae and Muridae) and Scandentia (Tupaiidae) The majority of these captures
was predominated by the Mullers rat (Sundamys muelleri) followed by Brown spiny rat
(Maxomys rajah) and Common treeshrew (Tupaia glis) Of these hosts six groups of
ectoparasites were recovered in this study namely ticks mesostigmatid listrophorid
chiggers lice and itch mites Two orders (Acarina and Anoplura) and seven families of
ectoparasites were present in this study namely Ixodidae Laelaptidae Trombiculidae
Atopomelidae Sarcoptidae Hoplopleuridae and Polyplacidae Twenty-three genera with 47
species of ectoparasites of Rodentia and Scandentia were recorded The ectoparasites were
sampled from all the seven types of habitats namely secondary forest lowland dipterocarp
forest riverine forest peat swamp mixed dipterocarp forest hill dipterocarp forest and
limestone forest Among the 16 localities secondary forest recorded the highest number of
host caught ectoparasites collected and with high infestation while the limestone forest was
found to have the highest number of host species and ectoparasite species compared to the
other five habitats Among the ectoparasites found Dermacentor sp Haemaphysalis sp
VI
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
DECLARATION
I hereby declare that all the work presented in the thesis is entirely my own work and has not
been submitted in support of an application for another degree or qualification to this or any
other university or institute of higher learning
(Madinah Binti Adrus)
Date
ii
DEDICATION
I dedicate my work to my beloved parents family mentors and all my loving
friends
111
ACKNOWLEDGEMENT
Alhamdullilah and thank Allah SWT for the bless and grace given to me for completing this
thesis successfully First of all I would like to thank my principle supervisor Professor Dr
Fatimah Abang and my co-supervisors Dr Mariana Ahamad and Professor Dr Mohd
Tajuddin Abdullah for their guidance encouragement advice concern support and
constructive comments during this study
I would like to thank the Faculty of Resource Science and Technology Universiti Malaysia
Sarawak (UNIMAS) and the Institute for Medical Research Kuala Lumpur (lMR) giving me
the various logistic and administrative supports during this study Without the collaboration
between Universiti Malaysia Sarawak (UNIMAS) and Institute for Medical Research Kuala
Lumpur (IMR) this study could not be completed successfully I really appreciated the
experience and knowledge gained during my training in acarology module diploma in
applied parasitology and entomology course and identification of acarine ectoparasites at
Institute Medical Research Kuala Lumpur (21 July -7 August 2009) All knowledge and
experience from the training were very useful to complete this study
I would like to thank UNIMAS for granting me the Zamalah scholarship 2009111 for my
postgraduate financial support This study was mostly supported from the research project
funded by a UNIMAS top-down grant on the zoonosis and EID [E14006 IF07 106 IZRC 103
12007 (03)] and FRGSOl(23)17661201O(47) led by Professor Dr Mohd Tajuddin Abdullah
and colleagues I would also like to thank Sarawak Forestry Corporation and Sarawak
Forestry Department for granting permission under the State Wild Life Protection Rules 1998
and permit number NCCD 9074(IV)29 to enter and collect sample in protected areas in
Sarawak use the faci tities and conduct research and warm hospitality during the field
IV
1
sampling My thanks also go to the Department of Wildlife and National Park (DWNP)
Kuala Lumpur Sabah Wildlife Department and Sabah Forest Department Kota Kinabalu
Sabah for their kind hospitality during my study in Peninsular Malaysia and Sabah
Within two years I have been fortunate to learn about the meaning of friendship I would like
to thank all members of the Department of Zoology Mr Wahap Marni Mr Mohd lalani
Mortada Mr Isa Sait Mr Huzal Irwan Husin Mr Trevor Allen and Mr Besar Keto for
their hard work and assistance throughout this study Besides that special thanks to Mrs
Halimaton Ibrahim Mr Mohd Kulaimi Bujang and all staff in the Acarology Unit of Institute
for Medical Research (lMR) for their guidance during the acarology training
To the Department of Zoology colleagues Muhamad Ikhwan Idris Kishen Bunya
Christharina Gintoron Irene Christianus Roberta Chaya Tawie Mohd Ridwan Abd
Rahman Pang Sing Tyan Sigit Wirantoro Nor Haliza Hasan Eileen ak Lit Mohd Fizl Sidq
Nur Salmizar Zahirunisa Abdul Rahim Debby Lim Siti Zuriani Ismail Wan Nurainie Wan
Ismail Farhana Anwarali Khan Badiozaman Sulaiman Mohd HanifRidzuan Mat Daud Nur
Aida Tamrin and Mr Faisal Anwarali Khan I wish to thank them for their wonderful
friendship for the great times shared knowledge and support
I would like to take this opportunity to thank those who are closest to me Firstly my loving
father Adrus Bakarudin and mother Rohana Hj 10lhi whose tender support and prayers and
to my brothers Fadillah Hussien and Abdul Ar-Razzaaq who always motivate me in
completing this thesis Therefore finally I dedicated this thesis for them
v
ABSTRACT
Field surveys of ectoparasites on Rodentia and Scandentia were conducted in 16 different
locations in Malaysia from June 2008 to May 20 I O The objectives of this study were to
determine the taxonomic composition of ectoparasites on Rodentia and Scandentia to
determine the relationship between ecological diversity and the host-parasite in different
types of ecological habitat in Malaysia and to examine whether the presence of ectoparasites
(ticks) have any potential health risks of rickettsial disease to local communities living
around the study area A total of 142 small mammals comprising of four species of squirrels
(Sciuridae) 12 species of rats (Muridae) and seven species of treeshrews (Tupaiidae) were
captured and examined for ectoparasites The hosts were derived from two orders namely
Rodentia (Sciuridae and Muridae) and Scandentia (Tupaiidae) The majority of these captures
was predominated by the Mullers rat (Sundamys muelleri) followed by Brown spiny rat
(Maxomys rajah) and Common treeshrew (Tupaia glis) Of these hosts six groups of
ectoparasites were recovered in this study namely ticks mesostigmatid listrophorid
chiggers lice and itch mites Two orders (Acarina and Anoplura) and seven families of
ectoparasites were present in this study namely Ixodidae Laelaptidae Trombiculidae
Atopomelidae Sarcoptidae Hoplopleuridae and Polyplacidae Twenty-three genera with 47
species of ectoparasites of Rodentia and Scandentia were recorded The ectoparasites were
sampled from all the seven types of habitats namely secondary forest lowland dipterocarp
forest riverine forest peat swamp mixed dipterocarp forest hill dipterocarp forest and
limestone forest Among the 16 localities secondary forest recorded the highest number of
host caught ectoparasites collected and with high infestation while the limestone forest was
found to have the highest number of host species and ectoparasite species compared to the
other five habitats Among the ectoparasites found Dermacentor sp Haemaphysalis sp
VI
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
DEDICATION
I dedicate my work to my beloved parents family mentors and all my loving
friends
111
ACKNOWLEDGEMENT
Alhamdullilah and thank Allah SWT for the bless and grace given to me for completing this
thesis successfully First of all I would like to thank my principle supervisor Professor Dr
Fatimah Abang and my co-supervisors Dr Mariana Ahamad and Professor Dr Mohd
Tajuddin Abdullah for their guidance encouragement advice concern support and
constructive comments during this study
I would like to thank the Faculty of Resource Science and Technology Universiti Malaysia
Sarawak (UNIMAS) and the Institute for Medical Research Kuala Lumpur (lMR) giving me
the various logistic and administrative supports during this study Without the collaboration
between Universiti Malaysia Sarawak (UNIMAS) and Institute for Medical Research Kuala
Lumpur (IMR) this study could not be completed successfully I really appreciated the
experience and knowledge gained during my training in acarology module diploma in
applied parasitology and entomology course and identification of acarine ectoparasites at
Institute Medical Research Kuala Lumpur (21 July -7 August 2009) All knowledge and
experience from the training were very useful to complete this study
I would like to thank UNIMAS for granting me the Zamalah scholarship 2009111 for my
postgraduate financial support This study was mostly supported from the research project
funded by a UNIMAS top-down grant on the zoonosis and EID [E14006 IF07 106 IZRC 103
12007 (03)] and FRGSOl(23)17661201O(47) led by Professor Dr Mohd Tajuddin Abdullah
and colleagues I would also like to thank Sarawak Forestry Corporation and Sarawak
Forestry Department for granting permission under the State Wild Life Protection Rules 1998
and permit number NCCD 9074(IV)29 to enter and collect sample in protected areas in
Sarawak use the faci tities and conduct research and warm hospitality during the field
IV
1
sampling My thanks also go to the Department of Wildlife and National Park (DWNP)
Kuala Lumpur Sabah Wildlife Department and Sabah Forest Department Kota Kinabalu
Sabah for their kind hospitality during my study in Peninsular Malaysia and Sabah
Within two years I have been fortunate to learn about the meaning of friendship I would like
to thank all members of the Department of Zoology Mr Wahap Marni Mr Mohd lalani
Mortada Mr Isa Sait Mr Huzal Irwan Husin Mr Trevor Allen and Mr Besar Keto for
their hard work and assistance throughout this study Besides that special thanks to Mrs
Halimaton Ibrahim Mr Mohd Kulaimi Bujang and all staff in the Acarology Unit of Institute
for Medical Research (lMR) for their guidance during the acarology training
To the Department of Zoology colleagues Muhamad Ikhwan Idris Kishen Bunya
Christharina Gintoron Irene Christianus Roberta Chaya Tawie Mohd Ridwan Abd
Rahman Pang Sing Tyan Sigit Wirantoro Nor Haliza Hasan Eileen ak Lit Mohd Fizl Sidq
Nur Salmizar Zahirunisa Abdul Rahim Debby Lim Siti Zuriani Ismail Wan Nurainie Wan
Ismail Farhana Anwarali Khan Badiozaman Sulaiman Mohd HanifRidzuan Mat Daud Nur
Aida Tamrin and Mr Faisal Anwarali Khan I wish to thank them for their wonderful
friendship for the great times shared knowledge and support
I would like to take this opportunity to thank those who are closest to me Firstly my loving
father Adrus Bakarudin and mother Rohana Hj 10lhi whose tender support and prayers and
to my brothers Fadillah Hussien and Abdul Ar-Razzaaq who always motivate me in
completing this thesis Therefore finally I dedicated this thesis for them
v
ABSTRACT
Field surveys of ectoparasites on Rodentia and Scandentia were conducted in 16 different
locations in Malaysia from June 2008 to May 20 I O The objectives of this study were to
determine the taxonomic composition of ectoparasites on Rodentia and Scandentia to
determine the relationship between ecological diversity and the host-parasite in different
types of ecological habitat in Malaysia and to examine whether the presence of ectoparasites
(ticks) have any potential health risks of rickettsial disease to local communities living
around the study area A total of 142 small mammals comprising of four species of squirrels
(Sciuridae) 12 species of rats (Muridae) and seven species of treeshrews (Tupaiidae) were
captured and examined for ectoparasites The hosts were derived from two orders namely
Rodentia (Sciuridae and Muridae) and Scandentia (Tupaiidae) The majority of these captures
was predominated by the Mullers rat (Sundamys muelleri) followed by Brown spiny rat
(Maxomys rajah) and Common treeshrew (Tupaia glis) Of these hosts six groups of
ectoparasites were recovered in this study namely ticks mesostigmatid listrophorid
chiggers lice and itch mites Two orders (Acarina and Anoplura) and seven families of
ectoparasites were present in this study namely Ixodidae Laelaptidae Trombiculidae
Atopomelidae Sarcoptidae Hoplopleuridae and Polyplacidae Twenty-three genera with 47
species of ectoparasites of Rodentia and Scandentia were recorded The ectoparasites were
sampled from all the seven types of habitats namely secondary forest lowland dipterocarp
forest riverine forest peat swamp mixed dipterocarp forest hill dipterocarp forest and
limestone forest Among the 16 localities secondary forest recorded the highest number of
host caught ectoparasites collected and with high infestation while the limestone forest was
found to have the highest number of host species and ectoparasite species compared to the
other five habitats Among the ectoparasites found Dermacentor sp Haemaphysalis sp
VI
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
ACKNOWLEDGEMENT
Alhamdullilah and thank Allah SWT for the bless and grace given to me for completing this
thesis successfully First of all I would like to thank my principle supervisor Professor Dr
Fatimah Abang and my co-supervisors Dr Mariana Ahamad and Professor Dr Mohd
Tajuddin Abdullah for their guidance encouragement advice concern support and
constructive comments during this study
I would like to thank the Faculty of Resource Science and Technology Universiti Malaysia
Sarawak (UNIMAS) and the Institute for Medical Research Kuala Lumpur (lMR) giving me
the various logistic and administrative supports during this study Without the collaboration
between Universiti Malaysia Sarawak (UNIMAS) and Institute for Medical Research Kuala
Lumpur (IMR) this study could not be completed successfully I really appreciated the
experience and knowledge gained during my training in acarology module diploma in
applied parasitology and entomology course and identification of acarine ectoparasites at
Institute Medical Research Kuala Lumpur (21 July -7 August 2009) All knowledge and
experience from the training were very useful to complete this study
I would like to thank UNIMAS for granting me the Zamalah scholarship 2009111 for my
postgraduate financial support This study was mostly supported from the research project
funded by a UNIMAS top-down grant on the zoonosis and EID [E14006 IF07 106 IZRC 103
12007 (03)] and FRGSOl(23)17661201O(47) led by Professor Dr Mohd Tajuddin Abdullah
and colleagues I would also like to thank Sarawak Forestry Corporation and Sarawak
Forestry Department for granting permission under the State Wild Life Protection Rules 1998
and permit number NCCD 9074(IV)29 to enter and collect sample in protected areas in
Sarawak use the faci tities and conduct research and warm hospitality during the field
IV
1
sampling My thanks also go to the Department of Wildlife and National Park (DWNP)
Kuala Lumpur Sabah Wildlife Department and Sabah Forest Department Kota Kinabalu
Sabah for their kind hospitality during my study in Peninsular Malaysia and Sabah
Within two years I have been fortunate to learn about the meaning of friendship I would like
to thank all members of the Department of Zoology Mr Wahap Marni Mr Mohd lalani
Mortada Mr Isa Sait Mr Huzal Irwan Husin Mr Trevor Allen and Mr Besar Keto for
their hard work and assistance throughout this study Besides that special thanks to Mrs
Halimaton Ibrahim Mr Mohd Kulaimi Bujang and all staff in the Acarology Unit of Institute
for Medical Research (lMR) for their guidance during the acarology training
To the Department of Zoology colleagues Muhamad Ikhwan Idris Kishen Bunya
Christharina Gintoron Irene Christianus Roberta Chaya Tawie Mohd Ridwan Abd
Rahman Pang Sing Tyan Sigit Wirantoro Nor Haliza Hasan Eileen ak Lit Mohd Fizl Sidq
Nur Salmizar Zahirunisa Abdul Rahim Debby Lim Siti Zuriani Ismail Wan Nurainie Wan
Ismail Farhana Anwarali Khan Badiozaman Sulaiman Mohd HanifRidzuan Mat Daud Nur
Aida Tamrin and Mr Faisal Anwarali Khan I wish to thank them for their wonderful
friendship for the great times shared knowledge and support
I would like to take this opportunity to thank those who are closest to me Firstly my loving
father Adrus Bakarudin and mother Rohana Hj 10lhi whose tender support and prayers and
to my brothers Fadillah Hussien and Abdul Ar-Razzaaq who always motivate me in
completing this thesis Therefore finally I dedicated this thesis for them
v
ABSTRACT
Field surveys of ectoparasites on Rodentia and Scandentia were conducted in 16 different
locations in Malaysia from June 2008 to May 20 I O The objectives of this study were to
determine the taxonomic composition of ectoparasites on Rodentia and Scandentia to
determine the relationship between ecological diversity and the host-parasite in different
types of ecological habitat in Malaysia and to examine whether the presence of ectoparasites
(ticks) have any potential health risks of rickettsial disease to local communities living
around the study area A total of 142 small mammals comprising of four species of squirrels
(Sciuridae) 12 species of rats (Muridae) and seven species of treeshrews (Tupaiidae) were
captured and examined for ectoparasites The hosts were derived from two orders namely
Rodentia (Sciuridae and Muridae) and Scandentia (Tupaiidae) The majority of these captures
was predominated by the Mullers rat (Sundamys muelleri) followed by Brown spiny rat
(Maxomys rajah) and Common treeshrew (Tupaia glis) Of these hosts six groups of
ectoparasites were recovered in this study namely ticks mesostigmatid listrophorid
chiggers lice and itch mites Two orders (Acarina and Anoplura) and seven families of
ectoparasites were present in this study namely Ixodidae Laelaptidae Trombiculidae
Atopomelidae Sarcoptidae Hoplopleuridae and Polyplacidae Twenty-three genera with 47
species of ectoparasites of Rodentia and Scandentia were recorded The ectoparasites were
sampled from all the seven types of habitats namely secondary forest lowland dipterocarp
forest riverine forest peat swamp mixed dipterocarp forest hill dipterocarp forest and
limestone forest Among the 16 localities secondary forest recorded the highest number of
host caught ectoparasites collected and with high infestation while the limestone forest was
found to have the highest number of host species and ectoparasite species compared to the
other five habitats Among the ectoparasites found Dermacentor sp Haemaphysalis sp
VI
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
1
sampling My thanks also go to the Department of Wildlife and National Park (DWNP)
Kuala Lumpur Sabah Wildlife Department and Sabah Forest Department Kota Kinabalu
Sabah for their kind hospitality during my study in Peninsular Malaysia and Sabah
Within two years I have been fortunate to learn about the meaning of friendship I would like
to thank all members of the Department of Zoology Mr Wahap Marni Mr Mohd lalani
Mortada Mr Isa Sait Mr Huzal Irwan Husin Mr Trevor Allen and Mr Besar Keto for
their hard work and assistance throughout this study Besides that special thanks to Mrs
Halimaton Ibrahim Mr Mohd Kulaimi Bujang and all staff in the Acarology Unit of Institute
for Medical Research (lMR) for their guidance during the acarology training
To the Department of Zoology colleagues Muhamad Ikhwan Idris Kishen Bunya
Christharina Gintoron Irene Christianus Roberta Chaya Tawie Mohd Ridwan Abd
Rahman Pang Sing Tyan Sigit Wirantoro Nor Haliza Hasan Eileen ak Lit Mohd Fizl Sidq
Nur Salmizar Zahirunisa Abdul Rahim Debby Lim Siti Zuriani Ismail Wan Nurainie Wan
Ismail Farhana Anwarali Khan Badiozaman Sulaiman Mohd HanifRidzuan Mat Daud Nur
Aida Tamrin and Mr Faisal Anwarali Khan I wish to thank them for their wonderful
friendship for the great times shared knowledge and support
I would like to take this opportunity to thank those who are closest to me Firstly my loving
father Adrus Bakarudin and mother Rohana Hj 10lhi whose tender support and prayers and
to my brothers Fadillah Hussien and Abdul Ar-Razzaaq who always motivate me in
completing this thesis Therefore finally I dedicated this thesis for them
v
ABSTRACT
Field surveys of ectoparasites on Rodentia and Scandentia were conducted in 16 different
locations in Malaysia from June 2008 to May 20 I O The objectives of this study were to
determine the taxonomic composition of ectoparasites on Rodentia and Scandentia to
determine the relationship between ecological diversity and the host-parasite in different
types of ecological habitat in Malaysia and to examine whether the presence of ectoparasites
(ticks) have any potential health risks of rickettsial disease to local communities living
around the study area A total of 142 small mammals comprising of four species of squirrels
(Sciuridae) 12 species of rats (Muridae) and seven species of treeshrews (Tupaiidae) were
captured and examined for ectoparasites The hosts were derived from two orders namely
Rodentia (Sciuridae and Muridae) and Scandentia (Tupaiidae) The majority of these captures
was predominated by the Mullers rat (Sundamys muelleri) followed by Brown spiny rat
(Maxomys rajah) and Common treeshrew (Tupaia glis) Of these hosts six groups of
ectoparasites were recovered in this study namely ticks mesostigmatid listrophorid
chiggers lice and itch mites Two orders (Acarina and Anoplura) and seven families of
ectoparasites were present in this study namely Ixodidae Laelaptidae Trombiculidae
Atopomelidae Sarcoptidae Hoplopleuridae and Polyplacidae Twenty-three genera with 47
species of ectoparasites of Rodentia and Scandentia were recorded The ectoparasites were
sampled from all the seven types of habitats namely secondary forest lowland dipterocarp
forest riverine forest peat swamp mixed dipterocarp forest hill dipterocarp forest and
limestone forest Among the 16 localities secondary forest recorded the highest number of
host caught ectoparasites collected and with high infestation while the limestone forest was
found to have the highest number of host species and ectoparasite species compared to the
other five habitats Among the ectoparasites found Dermacentor sp Haemaphysalis sp
VI
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
ABSTRACT
Field surveys of ectoparasites on Rodentia and Scandentia were conducted in 16 different
locations in Malaysia from June 2008 to May 20 I O The objectives of this study were to
determine the taxonomic composition of ectoparasites on Rodentia and Scandentia to
determine the relationship between ecological diversity and the host-parasite in different
types of ecological habitat in Malaysia and to examine whether the presence of ectoparasites
(ticks) have any potential health risks of rickettsial disease to local communities living
around the study area A total of 142 small mammals comprising of four species of squirrels
(Sciuridae) 12 species of rats (Muridae) and seven species of treeshrews (Tupaiidae) were
captured and examined for ectoparasites The hosts were derived from two orders namely
Rodentia (Sciuridae and Muridae) and Scandentia (Tupaiidae) The majority of these captures
was predominated by the Mullers rat (Sundamys muelleri) followed by Brown spiny rat
(Maxomys rajah) and Common treeshrew (Tupaia glis) Of these hosts six groups of
ectoparasites were recovered in this study namely ticks mesostigmatid listrophorid
chiggers lice and itch mites Two orders (Acarina and Anoplura) and seven families of
ectoparasites were present in this study namely Ixodidae Laelaptidae Trombiculidae
Atopomelidae Sarcoptidae Hoplopleuridae and Polyplacidae Twenty-three genera with 47
species of ectoparasites of Rodentia and Scandentia were recorded The ectoparasites were
sampled from all the seven types of habitats namely secondary forest lowland dipterocarp
forest riverine forest peat swamp mixed dipterocarp forest hill dipterocarp forest and
limestone forest Among the 16 localities secondary forest recorded the highest number of
host caught ectoparasites collected and with high infestation while the limestone forest was
found to have the highest number of host species and ectoparasite species compared to the
other five habitats Among the ectoparasites found Dermacentor sp Haemaphysalis sp
VI
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
I
Ixodes sp 1 granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense
Sarcoptes scabiei Polypax spinulosa and Hoplopleura dissicula are of known medical
importance Fifty individuals of ticks collected from the 16 locations of study sites (44
individuals) and museum collections (six individuals) were used for detection of Rickettsia
species The results of Polymerase Chain Reaction (PCR) detections were negative showing
that there was no infection of ticks by Rickettsia species
Keywords ectoparasites Rodentia Scandentia host ecological habitat Polymerase Chain
Reaction (PCR)
Vll
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
Ektoparasit Fauna ke atas Roden dan Scanden pada Ecologi Hahitat yang Berlainan dan
Pemhahitan dalam Potensi Zoonotik di Malaysia
Ahstrak
Tinjauan ke atas ektoparasit pada Rodentia dan Scandentia telah dijalankan di J6 kawasan
berainan di Malaysia dari bulan Jun 2008 sehingga bulan Mei 2010 Tujuan kajian ini
dijalankan adalah untuk mengenalpasti komposisi taksonomi ke atas ektoparasit pada
Rodentia dan Scandentia untuk mengenalpasti hubungan di antara kepelbagaian ekolog dan
perumah-parasit di kawasan berlainan ekologi habitat di Malaysia dan untuk mengllji sama
ada kehadiran ektoparasit (sengkenit) berkemungkinan untuk menyebar penyakit yang
disebabkan oleh Rickettsia dan seterusnya berpotensi untuk membahayakan kesihatan
penduduk yang tinggal di kawasan kajian Sejumlah J42 mammalia kecil yang terdiri
daripada empat spesies tupai (Sciuridae) J2 spesies tikus (Muridae) dan tlljuh spesies tupai
muncung (Tupaiidae) telah ditangkap dan diperiksa untuk kehadiran ektoparasit Kesemua
perumah telah dikenalpasti tergolong dalam dua order iaitu Rodentia (Sciuridae dan
Muridae) dan Scandentia (Tupaiidae) Hasil tangkapan ini adalah didominasikan oleh tikus
Muller (Sundamys muelleri) diikuti oleh tikus cokelat berbulu duri (Maxomys rajah) dan
tupai muncong besar (Jupaia glis) Hasil daripada perumah yang di tangkap ektoparasit
yang dikenalpasti dalam kajian ini terdiri daripada enam kumpulan iaitu sengkenit hama
mesostigmatid listrophorid tungau kutu dan hama gatal Dua order (Acarina dan
Anopura) dan tujuh famili ektoparasit telah dikenalpasti dalam kajian ini iailu Ixodidae
Laelaptidae Trombiculidae Atopomelidae Sarcoptidae Hoplopleuridae dan Polyplacidae
Dua puluh tiga genus dengan 47 spesies ektoparasit pada Rodentia dan Scandentia telah
direkodkan Ektoparasit telah diperolehi daripada kesemua tujuh jenis habitat iaitu hutan
viii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
sekunder hutan dipterokarp tanah pamah hutan sungai paya gambut hutan dipterokarp
campuran hutan dipterokarp bukit dan hutan batu kapur Di antara 16 lokasi yang dikaji
hutan ekunder merekodkan hasil tangkapan yang tertinggi bagi perumah ektoparasit dan
kadar serangan manakala hutan batu kapur didapati mempunyai bilangan yang tertinggi
bagi spesies perumah dan spesies ektoparasit berbanding dengan lima habitat yang lain Di
antara ektoparasit yang dijumpai ialah Dermacentor sp Haemaphvsalis sp Ixodes sp l
granulatus Laelaps nuttalli Leptotrombidium sp Leptotrombidium deliense Sarcoptes
scabiei Polypax spinulosa dan Hoplopleura dissicula yang dikenalpasti mempunyai
kepentingan perubatan Lima puluh ekor sengkenit yang dikumpulkan dari 16 lokasi kajian
(44 individu) dan koleksi dari muzium (enam individu) telah digunakan untuk mengesan
kehadiran spesies Rickettsia Keputusan Tindakbalas Rantai Polimerase menunjukkan
keputusan negatif dan liada jangkitan spesies Rickettsia ke alas sengkenit yang diuji
Kata cunei ektoparasit Rodentia Scandenlia perumah ekologi habitat Tindakbalas Rantai
Polimerase
IX
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
TABLE OF CONTENTS
Title Page
Declaration II
Dedication 111
Acknowledgements IV
Abstract VI
Abstrak Vlll
Table ofContents x
List of Tables XVI
List of Figures XVII
List of Abbreviations XXI
Chapter 1 General Introduction
Research Overview
Objectives 3
Chapter 2 Literature Review
Ectoparasites 4
Category of Ectoparasi tes 5
Hosts ofEctoparasites 8
Previous Study of Ectoparasites 8
Ectoparasites as Carriers of Disease 12
Rickettsia species 14
x
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
26 The Effects of Rickettsia species 15
27 Previous Reports of Rickettsia in Malaysia 15
Chapter 3 General Materials and Methods
31 Study Sites 17
32 Host Collection 19
33 Processing Animals 21
34 Mounting ofEctoparasites 22
35 Identification ofEctoparasites 22
36 Detection of Rickettsiae in Selected Ticks 23
361 Isolation of DNA from Selected Tick Samples 23
362 Polymerase Chain Reaction (PCR) Amplification of Rickettsiae from 2S
Selected Tick Samples
Chapter 4 Taxonomic Composition of Ectoparasites on Rodentia and
Scandentia in Malaysia
Introduction 28
Materials and Methods 29
Results 313
43 t Taxonomic Diversity 31
432 Geographical Distribution 32
433 Systematic Accounts 34
4331 Key to the Orders of Ectoparasites Collected in this Study 34
xi
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
4332 Families of Ectoparasites Collected in this Study 34
43321 Key to Families of the Order Acarina (Ectoparasitic Acarine) 34
43322 Key to Families of the Order Anoplura (Ectoparasitic Insect) 37
4333 Genera of the Ectoparasites Collected in this Study 37
43331 Key to Genera of the Family Ixodidae 37
43332 Key to Genera of the Family Laelapidae 49
433321 Key to the Species ofLaeaps in Malaysia 57
43333 Key to Genera of the Family Trombiculidae 85
43334 Genera of the Family Atopomelidae 100
43335 Genera ofthe Family Sarcoptidae 113
43336 Key to Genera ofthe Family Hoplopleuridae 117
43337 Key to Genera of the Family Polyplacidae 119
Discussion 126
Conclusion 130
Chapter 5 Ecological diversity and host-parasite relationships in Rodentia and
Scandentia
Introduction 131
Materials and Methods 133
521 Description of Study Area 133
5211 Bukit Aup Jubilee Park Sibu Sarawak 134
5212 Sungai Menyarin Lanjak Entimau Wildlife Sanctuary Sarawak 134
5213 Sungai Bloh Lanjak Entimau Wildlife Sanctuary Sarawak 136
XII
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
5214 Kampung Giam Padawan Sarawak 136
5215 Endau Kluang Wildlife Reserve lohore 136
521 6 Kubah Nationat Park Kuching Sarawak 137
5217 Balambangan Island Sabah 137
5218 Tasek Bera Pahang 138
5219 Rumah Temuai Nanga Merit Kapit Sarawak 138
521 10 Sungai Beletik Nanga Merit Kapit Sarawak 139
52111 Gunung Regu Padawan Sarawak 139
52112 Sungai Dusun Wildlife Reserve Selangor 139
52113 Lata Bujang Krau Wildlife Reserve Pahang 140
521 14 Bukit Pueh Sematan Sarawak 140
521 15 Human settlement Kanowit Sarawak 141
52 116 Niah National Park Miri Sarawak 141
522 Methodology 141
Results 142
531 Taxonomic Composition of Rodents and Scandents 142
532 Infestation Rates in Small Mammals 144
533 Taxonomic Composition of Ectoparasites Collected from Host 144
5331 Ticks 144
5332 Mesostigmatid Mites 146
5333 Chiggers or Larval of Trombiculid Mites 149
5334 Lice 149
5335 Listrophorid Mites 150
X111
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
5336 Astigmatid mites (Itch Mites) 150
534 The Relationships of Hosts and Ectoparasites in Different Ecological Habitats 151
5341 The Host in Different Habitats 151
5342 Ectoparasites in Different Habitats 153
53421 Secondary Forest 153
53422 Limestone Forest 153
53423 Hill Dipterocarp Forest 155
53424 Lowland Dipterocarp Forest 158
53425 Mixed Dipterocarp Forest 158
53426 Peat Swamp 158
53427 Riverine Forest 159
Discussion 159
Conclusion 167
Chapter 6 Detection of Rickettsia Species in Ectoparasite (Tick) Samples
Introduction 168
Materials and Methods 170
621 Tick Samples Used for Test 170
622 Detection ofRickettsia Species in Selected Ticks 173
173Results
Discussion 175
Conclusion 177
xiv
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
Chapter 7 General Discussion and Conclusion
General Discussion 178
711 Ectoparasite Composition 178
712 Host-parasite Relationships in Contrasting Ecological Habitats 180
713 Potential Zoonotic Ectoparasites 181
Conclusion 182
Future Direction and Recommendation 183
REFERENCES 185
APPENDIX 205
xv
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
LIST OF TABLES
Table 31 Summary of 16 locations of study sites in Malaysia with coordinate and 19
habitat types of each location
16 study sites
genes
Table 32 Summary of dates of sampling total days sampling and methods used in 20
Table 33 Primers and nucleotide sequence used for amplification of rickettsial 25
Table 34 Component of mastermix and volume used for each sample 26
Table 35 The parameter of peR process for a total of 40 cycles 27
Table 41 Taxonomic list and relative abundance of ectoparasites collected from 16 33
study sites
rodents and scandents were collected from 2008 to 20 I O
Table 51 Locality information for 16 sites in Malaysia at which ectoparasites of 135
52 Taxonomic list of hosts and the number of parasite infestation in 16 sites 143
53 Ectoparasite infestation rates on rodents and scan dents in 16 locations in 145
Malaysia (2008-2010)
54 Taxonomic list and number of ectoparasites fauna found on rodents and 147
scandents in 16 sites (2008-2010)
55 Ecological habitat versus total number of rodents and scandents caught 152
56 Percentage of ectoparasite infestation in seven habitats 154
57 Total number of ectoparasites extracted from rodents and scandents In 156
seven different types of habitats
61 List of species field code host species localities and habitats of ticks 171
used in the detection of Rickettsia species
xvi
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
LIST OF FIGURES
Figure 31 Map of sixteen localities of sampling sites in Malaysia 18
Figure 41 Order Acarina (a) hypostome present in the mouthparts (b) spiracular plates present (ventral view of Ixodidae) (c) stigmata and peritremes present (ventral view of Laelaptidae) (d) scutum present (dorsal view of Trombiculidae) (e) tarsal suckers present in Sarcoptidae (ventral view) and (f) long body shape of Atopomelidae
36
Figure 42 Order Anoplura (a) stout spines present and (b) stout spines absent 37
Figure 43 Family Ixodidae (a) anal groove contouring the anus posteriorly (ventral view of genus Amblyomma) (b) anal groove contouring the anus anteriorly (ventral view of genus Ixodes) (c) palpi laterally beyond the basis caputuli (dorsal view of genus Haemaphysalis) (d) palpi long and slender (dorsal view of genus Amblyomma) and (e) basis caputuli hexagonal (dorsal view of genus Rhipicephalus)
39
Figure 44 Distribution ofAmblyomma spp in Malaysia 40
Figure 45 Distribution ofDermacentor spp in Malaysia 42
Figure 46 Distribution ofHaemaphysalis spp in Malaysia 44
Figure 47 Distribution of Ixodes spp in Malaysia 46
Figure 48 Distribution of Ixodes granulatus in Malaysia 48
Figure 49 Distribution ofRhipicephalus spp in Malaysia 49
Figure 410 Family Ixodidae (ticks) (a) Amblyomma sp ~ (dorsal view) (b) Dermacentor sp ~ (ventral view) (c) Haemaphysalis sp ~ (ventral view) (d) Ixodes sp ~ (dorsal view) Ixodes granulatus ~ (ventral view) 0 (dorsal view) (f) Rhipicephalus sp ~ (dorsal view)
50
Figure 411 Family Laelapidae (ventral view) (a) genital shield with a pair of setae (b) genital shield with 3 or 4 pair of setae (c) hooklike structure on coxa II (d) no hooklike structure on coxa II (e) leg 1 not longer than leg II (f) leg 1 longer than leg II (g) transverse striated presternal area present and (h) transverse striated presternal area absent
52
Figure 412 Distribution ofEchinonyssus nasutus in Malaysia 53
Figure 413 Distribution ofHaemolaelaps audyi in Malaysia 54
Figure 414 Distribution ofHaemolaelaps traubi in Malaysia 56
XVll
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
Figure 415 Distribution of Haemolaelaps spp in Malaysia 57
(dorsal view) (b) Haemolaelaps audyi ~ (ventral view) (c) Haemolaelaps traubi ~ (ventral view) (d) Laelaps aingworthae ~
(ventral view) (e) Laelaps echidninus ~ (ventral view) (f) Laelaps flagellifer ~ (ventral view) (g) Laelaps insignis ~ (ventral view) and
Figure 416 Distribution ofLaelaps aingworthae in Malaysia 61
Figure 417 Distribution ofLaelaps echidninus in Malaysia 62
Figure 418 Distribution ofLaelapsflagellifer in Malaysia 64
Figure 419 Distribution ofLaelaps insignis in Malaysia 66
Figure 420 Distribution ofLaelaps mercedeae in Malaysia 68
Figure 421 Distribution of Laelaps nuttalli in Malaysia 69
Figure 422 Distribution ofLaelaps rex in Malaysia 70
Figure 423 Distribution ofLaelaps sanguisugus in Malaysia 73
Figure 424 Distribution ofLaelaps sculpturatus in Malaysia 75
Figure 425 Distribution ofLaelaps sedlaceki in Malaysia 79
Figure 426 Distribution of Laelaps turkestanicus in Malaysia 81
Figure 427 Distribution ofLongolaelaps longulus in Malaysia 83
FJ8UIe 428 Distribution ofLongolaelaps whartoni in Malaysia 84
Figure 429 Distribution ofHirstionyssus sp in Malaysia 85
Figure 430 Family Laelapidae (mesostigmatid mites) (a) Echinonyssus nasutus ~ 86
(b) Laelaps mercedeae ~ (ventral view)
figure 431 Family Laelapidae (mesostigmatid mites) (a) Laelaps nuttalli ~ 87 (ventral view) (b) Laelaps rex ~ (ventral view) (c) Laelaps sanguisugus ~ (ventral view) (d) Laelaps sculpturatus ~ (ventral view) (e) Laelaps sedlaceki ~ (ventral view) (f) Laelaps turkestanicus ~ (ventral view) (g) Longolaelaps longulus ~ (ventral view) and (h) Longolaelaps whartoni ~ (ventral view)
XVIll
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
Figure 432 Family Trombiculidae (a) anterior median seta present (b) anterior 89 median seta absent (c) scutum with anterolateral seta shoulders (d) posterolateral setae short than anterolateral setae and (e) anterolateral setae short than posterolateral setae
view) (b) Gahrliepia (gahrliepia) sp (dorsal view) (c) Gahrliepia (walchia) sp (dorsal view) (d) Leptotrombidium deliense (dorsal view (e) Leptotrombidium sp (dorsal view) (t) Siseca sp (dorsal view) (g) Walchiella sp (dorsal view)
Figure 433 Distribution of Ascoschoengastia spp in Malaysia 91
Figure 434 Distribution of Gahrliepia (gahrliepia) spp in Malaysia 92
Figure 435 Distribution of Gahrliepia (walchia) spp in Malaysia 93
Figure 436 Distribution of Leptotrombidium deliense in Malaysia 95
Figure 437 Distribution ofLeptotrombidium spp in Malaysia 96
Figure 438 Distribution ofMicrotrombicula spp in Malaysia 97
Figure 439 Distribution of Siseca spp in Malaysia 99
FIgUre 440 Distribution of Walchiella spp in Malaysia 100
Figure 441 Family Trombiculidae (chiggers) (a) Ascoschoengastia sp (dorsal 10 I
figure 442 Trochanter without setae (genus L istroph oro ides ) 102
Distribution ofListrophoroides sp1 in Malaysia 104
Distribution ofListrophoroides sp2 in Malaysia 106
Distribution ofListrophoroides sp3 in Malaysia 107
Distribution ofListrophoroides spA in Malaysia 108
Distribution ofListrophoroides sp5 in Malaysia 109
Distribution ofListrophoroides sp6 in Malaysia 110
Distribution ofListrophoroides sp7 in Malaysia III
Distribution ofListrophoroides sp8 in Malaysia 112
Distribution ofListrophorid 1 (unidentified) in Malaysia 113
xix
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
Figure 452 Family Atopomelidae (listrophorid mites) (a) Listrophoroides spt (b) 114 Listrophoroides sp2 (c) Listrophoroides sp3 (d) Listrophoroides sp4 (e) Listrophoroides sp5 (t) Listrophoroides sp6 (g) Listrophoroides sp7 (h) Listrophoroides sp8 (i) Listrophorid 1 (Unknown)
Figure 453 Tarsal sucker present (genus Sarcoptes) 115
Figure 454 Distribution ofSarcoptes scabiei in Malaysia 116
Figure 455 Sarcoptes scabiei (itch mites) (ventral view) 116
Figure 456 Family Hoplopleuridae (a) antenna four segmented and (b) antenna 117 five segmented
Figure 457 Distribution ofAncistroplax nasuta in Malaysia 118
Figure 458 Distribution ofHoplopleura dissicula in Malaysia 120
Pipre 459 Family Hoplopleuridae (a) Ancistroplax nasuta (ventral view) and (b) 120 Hoplopleura dissicula (ventral view)
Figure 460 Family Polyplacidae (a) tubercles present and (b) tubercles absent 121
Figure 461 Distribution ofNeohaematopinus callosciuri in Malaysia 122
Distribution of Polypax spinulosa in Malaysia 123
Distribution ofSathrax sp in Malaysia 124
Family Polyplacidae (a) Neohaematopinus callosciuri (ventral view) 125 (c) Polypax spinulosa (ventral view) (d) Sathrax sp (dorsal view)
Map of Malaysia and the 16 localities where ectoparasites of rodents 133 and scandents were sampled during the present study
Maps showing the 16 localities of selected ticks used in the detection 170 of rickettsial disease in Malaysia
Polymerase chain reaction products 174
xx
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
ABBREVIATIONS
bp base pair
BAJP Bukit Aup Jubilee Park
BIS Balambangan Island Sabah
BPS Bukit Pueh Sematan
degC degree Celcius (temperature)
DNA deoxyribonucleic acid
dNTP deoxyribonucleotide triphosphate
ddH20 double-distilled water
EtBr ethidium bromide
EKWR Endau Kluang Wildlife Reserve
g gram
GRP Gunung Regu Padawan
HCI hydrochloric acid
HSK Human Settlement Kanowit
KGP Kampung Giam Padawan
km kilometer
km2 kilometre square
KNP Kubah National Park
LBKWR Lata Bujang Krau Wildlife Reserve
M molar
MgCh magnesium chloride
ml mililitre
XXI
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
mm
mM
mtDNA
mg
nm
NP
NR
NNP
peR
PBS
RNase
rpm
RTNM
SBNM
SBLEWS
SDWR
SMLEWS
TAE
TBE
TE
TBRS
Jil
metre square
millimetre
millimolar
mitochondrial deoxyribonucleic acid
milligram
nanometre
National Park
Nature Reserve
Niah National Park
polymerase chain reaction
phosphate buffered saline
ribonuclease
rotation per minute
Rumah Temuai Nanga Merit
Sungai Beletik Nanga Merit
Sungai Blob Lanjak Entimau Wildlife Sanctuary
Sungai Dusun Wildlife Reserve
Sungai Menyarin Lanjak Entimau Wildlife Sanctuary
tris-acetate-etbylenediaminetetraacetic
tris borate EDT A
tris EDTA
T asek Bera Ramsar Site
microlitre
xxu
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii
flM micromolar
UNIMAS Universiti Ma1aysia Sarawak
UV ultraviolet
V volt
xxiii