Discussion%on%the%project% - Pennsylvania State University · Savant Genome Browser - Mozilla Firefox File Edit View History Bookmarks Tools- Help MGmail - a Google+ BMMB Early Edi...

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2012%'%BMMB%597D:%Analyzing%Next%Genera=on%Sequencing%Data%

%%Week%15,%Lecture%30%

István'Albert''

Biochemistry%and%Molecular%Biology%%and%Bioinforma=cs%Consul=ng%Center%

%Penn%State%

Discussion%on%the%project%

•  Some%observa=ons%on%the%project%

•  What%went%well%and%what%went%wrong%

•  Assembly%is%not%well%defined%'%small%changes%in%hash%sizes%!%different%results%

Assembly%on%forward%strand% Assembly%on%reverse%strand%

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2%

Heng%Li’s%bioawk%

git%clone%hWps://github.com/lh3/bioawk.git%

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3%

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4%

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5%

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