David Gius, M.D., Ph.D. Professor, Departments of Cancer Biology, Pediatrics, and Radiation Oncology Vanderbilt University School of Medicine Sirtuin 3: A Mitochondrial Watchdog Protein Vanderbilt Medical School
Jan 16, 2016
David Gius, M.D., Ph.D.Professor, Departments of Cancer Biology,
Pediatrics, and Radiation OncologyVanderbilt University School of Medicine
Sirtuin 3: A Mitochondrial Watchdog Protein
Vanderbilt Medical School
The Human Sirtuins
Nuclear
• Sirt1• Sirt6• Sirt7
Mitochondrial
• Sirt3• Sirt4• Sirt5
Cytoplasmic
• Sirt2
In active protein
Protein Deacetylation as a Post-Translation Protein Modification
Active protein
Non-HistoneProtein
CarcinogenesisIncreasing age
Caloric Restriction
Decreases aging
Activation of Sirtuin genes increase longevity
Rational for Sirtuins as Tumor Suppressors
?
Mice lacking Sirt2 and Sirt3 were constructed to determine if they prevent cancer / TSGs?
Tumor Suppressor Gene
Loss of function results in an in vitro tumor permissive cellular phenotype (two hit tissue culture immortalization.
Genetic knockout in mice results in the formation of murine tumors.
There is a loss of function or decrease in protein levels in human malignancies and this matches human samples.
Oncogene 1CMV Promoter Oncogene 2CMV Promoter
Two Gene Transformation Model for MEFs
I PP P
Normal cell Transformed cell
P
Pro-proliferativePro-survival genes
I PP P
Normal cell Transformed cell
P
Proliferative genePro-proliferative
Pro-survival genes
Myc RasTSG Gene Loss
Kim et al, 2010 Cancer Cell
Sirt3+/+ Myc/Ras cells
Sirt3-/- Myc/Ras cells
TABLE 1. Immortalization of Sirt3-/-
MEFs only requires a single oncogene __________________________________________________________________________________________________________________________ _______________________
Control Myc Ras Myc/Ras
_________________________________________________________________________
MEF Sirt3+/+
None None None Immort
MEF Sirt3-/-
None Immort Immort Immort __________________________________________________________________________ None , no MEF immortalization. Immort, immortalization.
Sirt3-/- MEFs are immortalized by a Single Oncogene
In Vitro Transformation Sirt3-/- MEFs by a Single Oncogene
*
Col
onie
s/H
pf
1
2
3
4
Myc/Ras Myc Ras Myc/Ras
*
*
SIRT3 +/+
SIRT3 -/-
*
Col
onie
s/H
pf
1
2
3
4
Myc/Ras Myc Ras Myc/Ras
*
*
SIRT3 +/+
SIRT3 -/-
SIRT3 +/+
SIRT3 -/-
Mammary Carcinogenesis in the Sirt3 knockout mice
# of
tu
mor
s
2
10
SIRT3+/+ SIRT3 -/-
*6
0
# of
tu
mor
s
2
10
SIRT3+/+ SIRT3 -/-
*6
0
Tumor #1 ++ ++Tumor #2 + +Tumor #3 + +Tumor #4 + +Tumor #5 ++ ++Tumor #6 + +Tumor #7 ++ +
ER PR
Tumor #1 ++ ++Tumor #2 + +Tumor #3 + +Tumor #4 + +Tumor #5 ++ ++Tumor #6 + +Tumor #7 ++ +
ER PR
6 15129 242118
% T
um
or F
ree
WTKO
50
100
30276 15129 242118
% T
um
or F
ree
WTKO
50
100
3027
100
Low
50
Med High Low Med High
3
1710
14
31Normal
Tumors
% T
otal
Sam
ple
s
100
Low
50
Med High Low Med High
3
1710
14
31Normal
Tumors
% T
otal
Sam
ple
s
SIRT3 is Decreased in Human Breast Cancers
SIR
T3
mR
NA
Fol
d e
xpre
ssio
n
8
6
4
2
** P < 0.0025
* P < 0.02
** *
*
Stage NB I IIA IIB IIIS
IRT
3 m
RN
AF
old
exp
ress
ion
8
6
4
2
** P < 0.0025
* P < 0.02
** *
*
Stage NB I IIA IIB III
Tissue Array (IHC) RNA Array (RT-PCR)
Kim et al, 2010 Cancer Cell
SIRT3 is Decreased in Human Breast CancersN
orm
aliz
ed e
xpre
ssio
n u
nit
s 1.5
1.0
0.5
0.0NormalBreast
BreastCancer
P = 1.0E-9
Nor
mal
ized
exp
ress
ion
un
its 1.5
1.0
0.5
0.0NormalBreast
BreastCancer
Nor
mal
ized
exp
ress
ion
un
its 1.5
1.0
0.5
0.0NormalBreast
BreastCancer
P = 1.0E-9 1.0
0.5
0.0
1.5
0.5
1.0
Nor
mal
ized
exp
ress
ion
uni
ts
G-1 G-2 G-3
P = 2.4E-131.0
0.5
0.0
1.5
0.5
1.0
Nor
mal
ized
exp
ress
ion
uni
ts
G-1 G-2 G-3
1.0
0.5
0.0
1.5
0.5
1.0
Nor
mal
ized
exp
ress
ion
uni
ts
G-1 G-2 G-3
P = 2.4E-131.0
0.5
0.5
0.0
Nor
mal
ized
exp
ress
ion
uni
ts
Well Mod Poor
P = 3.8E-101.0
0.5
0.5
0.0
Nor
mal
ized
exp
ress
ion
uni
ts
Well Mod Poor
1.0
0.5
0.5
0.0
Nor
mal
ized
exp
ress
ion
uni
ts
Well Mod Poor
P = 3.8E-10
Oncomine, UMich
Sirt3 is a mitochondrial tumor suppressor but…
• Mechanism? • Is it a sensing protein?• What are the targets of Sirt3 ?• Or what dysregulated proteins play a
role in the Sirt3-/- tumor permissive?
1.0
2.0
3.0
Myc/Ras Ras Myc/RasMyc
SIRT3+/+
SIRT3-/-
Mit
o-SO
X F
luor
esce
nce
Fol
d c
han
ge f
rom
WT
*
****
1.0
2.0
3.0
Myc/Ras Ras Myc/RasMyc
SIRT3+/+
SIRT3-/-
SIRT3+/+
SIRT3-/-
Mit
o-SO
X F
luor
esce
nce
Fol
d c
han
ge f
rom
WT
*
****
Transformed Sirt3 KO MEFs exhibit mt SuperoxideM
ito-
SOX
Flu
ores
cen
ceF
old
ch
ange
fro
m W
T
1.0
3.0
SIRT3+/+
SIRT3-/-
Cont
2.0
Antimycin
4.0
*
5 Gy
*
**
Mit
o-SO
X F
luor
esce
nce
Fol
d c
han
ge f
rom
WT
1.0
3.0
SIRT3+/+
SIRT3-/-SIRT3+/+
SIRT3-/-
Cont
2.0
Antimycin
4.0
*
5 Gy
*
**
Kim et al, 2010 Cancer Cell
MnSOD
O2- H2O2 H2O + O2
Catalase
Primary Mitochondrial O2- Detoxification Pathway
Criteria for Potential Sirt3 physiological Target
A protein that contain at least one reversible acetyl lysine that is altered by either caloric restriction, feasting, or other type of stress.
A Protein is hyperacetylated in the Sirt3 knockout livers or MEFs.
A protein contains at least one lysine that is deacetylated by Sirt3 both in vitro and in vivo.
The reversible acetyl lysine is evolutionary through out multiple species including less complex species.
Acetylation of the target lysine regulates enzymatic activity.
MnSOD contains a reversible lysine
0.5
1.0
Sirt3+/+ Sirt3-/-
*
Liv
er R
elat
ive
MnS
OD
Act
ivit
y (%
Con
t)
0.5
1.0
Sirt3+/+ Sirt3-/-
*
Liv
er R
elat
ive
MnS
OD
Act
ivit
y (%
Con
t)
0.5
1.0
Sirt3+/+ Sirt3-/-
*
ME
Fs
Rel
ativ
e M
nSO
DA
ctiv
ity
(% C
ont)
0.5
1.0
Sirt3+/+ Sirt3-/-
*
ME
Fs
Rel
ativ
e M
nSO
DA
ctiv
ity
(% C
ont)
Tao et al., 2010, Molecular Cell
MnSOD’s reversible is deacetylated by Sirt3
0.5
1.0 Sirt3-/-
ME
Fs
Rel
ativ
e M
nSO
DA
ctiv
ity
(% C
ont)
Lenti- Con Sirt3dn Sirt3
0.5
1.0 Sirt3-/-
ME
Fs
Rel
ativ
e M
nSO
DA
ctiv
ity
(% C
ont)
Lenti- Con Sirt3dn Sirt3
-acetyl
IP : MnSOD
lenti-Sirt3 Con dn wt
-MnSOD
IgG
wt
-acetyl
IP : MnSOD
lenti-Sirt3 Con dn wt
-MnSOD
IgG
wt
Mit
o-SO
X F
luor
esce
nce
Fol
d c
han
ge f
rom
WT
1
3 Sirt3+/+
Sirt3-/-
Cont
2 *
Cont
*
**
lenti-Sirt3-dn
lenti-Sirt3-wt
Mit
o-SO
X F
luor
esce
nce
Fol
d c
han
ge f
rom
WT
1
3 Sirt3+/+
Sirt3-/-Sirt3+/+
Sirt3-/-Sirt3+/+
Sirt3-/-
Cont
2 *
Cont
*
**
lenti-Sirt3-dn
lenti-Sirt3-wt
Targeting domain Catalytic Domain
Deacetylase DomainSIRT3-WT
Deacetylase DomainSIRT3-DN
248 - H-Y
Targeting domain Catalytic Domain
Deacetylase DomainSIRT3-WT
Targeting domain Catalytic Domain
Deacetylase DomainSIRT3-WT
Deacetylase DomainSIRT3-DN
248 - H-Y
Deacetylase DomainSIRT3-DN
248 - H-Y
MnSOD
GELLEAIK*RDF
50 100 150 200
MnSOD
GELLEAIK*RDF
50 100 150 200
115 122 127 91 98 103Human GELLEAIKRDFGS Rhesus macaque GELLEAIKRDFGSMouse GELLEAIKRDFGS Callithrix jacchus GELLEAIKRDFGSRat GELLEAIKRDFGS Common gibbon GELLEAIKRDFGSBovine GELLEAIKRDFGS Chimpanzee GELLEAIKRDFGS Guinea pig GELLEAIKRDFGSHorse GKLLDAIKRDFGS 117 124 129PIG GELLDAIKRDFGS Xenopus tropicalis GELLDAIKRDFGSB. Orangutan GELLDAIKRDFGS Zebrafish GELLEAIKRDFGSS. Orangutan GELLDAIKRDFGS
102 109 114114 121 126 Rhesus Monkey GELLEAIKRDFGS
C. elegans AELLTAIKSDFGS Chimpanzee GELLEAIKRDFGS
MnSOD K122 is an evolutionarily conserved reversible lysine
Tao et al., 2010, Molecular Cell
MnSOD K122 is Deacetylated by Sirt3 in vitro and in vivo
TSA + +MnSOD + +
SIRT3 + +NAD+ - +
20kD-acetyl lysine
122 MnSOD
TSA + +MnSOD + +
SIRT3 + +NAD+ - +
20kD-acetyl lysine
122 MnSOD
-K122MnSOD
-MnSOD
Sirt3 -/-+/+ +/+ -/-
-K122MnSOD
-MnSOD
Sirt3 -/-+/+ +/+ -/-
In vitro In vivo
K122
K122
K122K122
lenti-MnSODK122
Wild-type
H2N COOH
NH2O
Lysine (Lys, K)
lenti-MnSODK122
Wild-type
H2N COOH
NH2O
Lysine (Lys, K)
Lenti-MnSODK122-R
De-acetylated
H2N COOH
NH
N2H NH2+
Arginine (Arg, R)
Lenti-MnSODK122-R
De-acetylated
H2N COOH
NH
N2H NH2+
Arginine (Arg, R)
lenti -MnSOD K122 -Q
Acetylated
H2N COOH
NH3+
Glutamine ( Gln, Q)
lenti -MnSOD K122 -Q
Acetylated
H2N COOH
NH3+
Glutamine ( Gln
lenti -MnSOD K122 -Q
Acetylated
H2N COOH
NH3+
Glutamine ( Gln, Q)
lenti -MnSOD K122 -Q
Acetylated
H2N COOH
NH3+
Glutamine ( Gln
Mn
SOD
Act
ivit
y(U
/mg)
in M
nSD
O-/
-
10
20
30
MnSOD K122wt K122-Rcont K122-Q
*
*
Mn
SOD
Act
ivit
y(U
/mg)
in M
nSD
O-/
-
10
20
30
MnSOD K122wt K122-Rcont K122-Q
*
* 10
50
MnSOD
30
Mit
oSO
X F
luor
esce
nce
R
atio
/ M
ock
infe
ctio
n
K122wt K122-RpCMV K122-Q
*
**
10
50
MnSOD
30
Mit
oSO
X F
luor
esce
nce
R
atio
/ M
ock
infe
ctio
n
K122wt K122-RpCMV K122-Q
*
**
MnSODK122 acetylation status directs dismutase activity
MnSOD-/- MEFs
Tao et al., 2010, Molecular Cell
De-Acetylated MnSODAcetylated MnSOD
TABLE 1. MnSOD prevents Immortalization of SIRT3-/-
MEFs by a single oncogene __________________________________________________________________________________________________________________________________________________________
MEFs Control Myc Ras Myc/Ras
_____________________________________________________________________________
SIRT3+/+ None None None Immort SIRT3-/- None Immort Immort Immort SIRT3-/- + lenti-MnSODK122-Q None Immort Immort Immort SIRT3-/- + lenti-MnSODK122-R None None None Immortt _____________________________________________________________________________ None , no MEF immortalization. Immort, immortalization. lenti-MnSOD 10 MOI. Immortalization experiments were done in triplicate.
MnSODK122-R prevents in vitro Immortalization
Tao et al., 2010, Molecular Cell
AL CRMnSOD
Ac-MnSODK122
Ac-MnSODK68
OSCP
Ac-OSCPK139
SIRT3
COXIV
AL CRMnSOD
Ac-MnSODK122
Ac-MnSODK68
OSCP
Ac-OSCPK139
SIRT3
COXIV
MnSOD De-Acetylation Responds to Exercise and CR
Sirt3+/+
Cont EX Cont EX
Sirt3-/-
MnSODK122
MnSODK68
MnSOD
Sirt3+/+
Cont EX Cont EX
Sirt3-/-
MnSODK122
MnSODK68
MnSOD
K122
K122
K122K122
O2- O2
-
O2- O2
-
O2-
+-
H2O2
How does MnSOD fit into this model??
LongevityHibernation
Energy Conservation
FOXOACAC
ACAC ACAC
AC AC AC
Fasting Metabolic StateFeasting Metabolic State
AC
ACAC ACAC
AgingCancer
Pro-metabolism
ATP and Oxidative damage Repair of Oxidative damage
MnSOD
The Gius Lab