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Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion
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Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Mar 27, 2015

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Page 1: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Combining Observations and Models: A Bayesian View

Mark Berliner, OSU Stat Dept

• Bayesian Hierarchical Models

• Selected Approaches

• Geophysical

Examples

• Discussion

Page 2: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Main Themes1) Goal: Develop probability

distributions for unknowns of interest by combining information sources: Observations, theory, computer model output, past experience, etc.

2) Approaches: Bayesian Hierarchical Models Incorporate various information

sources by modeling 1. priors2. data model or likelihoods

Page 3: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Bayesian Hierarchical Models• Skeleton:

1. Data Model: [ Y | X , ]

2. Process Model Prior: [ X | ]

3. Prior on parameters: [ ]

• Bayes’ Theorem: posterior distribution: [ X , | Y]

• Compare to

“Statistics”: [ Y | ] [ ]

“Physics”: [ X | (Y) ]

Page 4: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

ApproachesA. Stochastic models incorporating science• Physical-statistical modeling (Berliner 2003

JGR) From ``F=ma'' to [ X | ] • Qualitative use of theory (eg., Pacific SST

model; Berliner et al. 2000 J. Climate)

B. Incorporating large-scale computer models

1) From model output to priors [ ]

2) Model output as samples from process model prior [ X | ] almost !

3) Model output as ``observations'' (Y)

C. Combinations

Page 5: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Glacial Dynamics (Berliner et al. 2008 J. Glaciol)

Steady Flow of Glaciers and Ice Sheets • Flow: gravity moderated by drag (base &

sides) & ….stuff….• Simple models: flow from geometry

Data: Program for Arctic Climate Regional Assessments

& Radarsat Antarctic Mapping Project

• surface topography (laser altimetry) • basal topography (radar altimetry) • velocity data (interferometry)

Page 6: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 7: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 8: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Modeling: surface – s, thickness – H, velocity -

u Physical Model

• Basal Stress: = - gH ds/dx (+ “stuff”)

• Velocities: u = ub + 0 H n

where ub = k p + ( gH )-q Our Model

• Basal Stress: = - gH ds/dx + where is a ``corrector process;” H, s unknown

• Velocities: u = ub + H n + e

where ub = k p + ( gH )-q or a constant;

is unknown, e is a noise process

Page 9: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 10: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Wavelet Smoothing of Base

Page 11: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Results: Velocity

Page 12: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Results: Stress and Corrector

Page 13: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Paleoclimate (Brynjarsdóttir & Berliner 2009)

Climate proxies: Tree rings, ice cores, corals, pollen, underground rock provide indirect information on climate

• Inverse problem: proxy f(climate)

Boreholes: Earth stores info on surface temp’s

• Model: Heat equation

Borehole data f(surface temp’s)

• Infer boundary condition (initial cond. is nuisance)

Page 14: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 15: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Modeling

• Data Model:

Y | Tr, ~ N( Tr + T0 1 + q R(k), 2 I)

true temp

Adjustments for rock types, etc.

• Process Model: heat equation applied to Tr

with b.cond. surface temp history Th

Tr | Th , ~ N( BTh , 2 I)

Th | ~ N( 0 , 2 I)

Y

h

r

Page 16: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 17: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 18: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 19: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

In progress:• Combining boreholes (parameters and

b.cond as samples from a distribution)

• Combining with other sources and proxies

Page 20: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 21: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 22: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Bayesian Hierarchical Models to Augment the

Mediterranean Forecast System (MFS)Ralph Milliff CoRAChris Wikle Univ. MissouriMark Berliner Ohio State Univ..Nadia Pinardi INGV (I'Istituto Nazionale di

Geofisica e Vulcanologia) Univ. Bologna (MFS Director)Alessandro Bonazzi, Srdjan Dobricic INGV, Univ. Bologna

Page 23: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Bayesian Modeling in Support of Massive Forecast Models

1. MFS is an Ocean Model

2. A Boundary Condition/Forcing: Surface Winds

3. Approach: produce surface vector winds (SVW), for ensemble data assimilation

• Exploit abundant, “good” satellite wind data (QuikSCAT)

• Samples from our winds-posterior ensemble for MFS

(Before us: coarse wind field (ECMWF))

Page 24: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

“Rayleigh Friction Model” for winds (Linear Planetary Boundary Layer Equations)

Theory

(neglect second order time derivative)discretize:

Our model

Page 25: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

BHM Ensemble Winds

10 m/s

10 members selected from the Posterior Distribution (blue)

Page 26: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

ApproachesA. Stochastic models incorporating science• Physical-statistical modeling (Berliner 2003

JGR) From ``F=ma'' to [ X | ] • Qualitative use of theory (eg., Pacific SST

model; Berliner et al. 2000 J. Climate)

B. Incorporating large-scale computer models

1) From model output to priors [ ]

2) Model output as samples from process model prior [ X | ] almost !

3) Model output as ``observations'' (Y)

C. Combinations

Page 27: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Part B) Information from Models

1) Develop prior from model output• Think of model output runs O1, … , On as samples

from some distribution• Do data analysis on O’s to estimate distribution• Use result (perhaps with modifications) as a prior

for X• Example: O’s are spatial fields: estimate spatial

covariance function of X based on O’s. • Example: Berliner et al (2003) J. Climate

Page 28: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

2) Model output as realizations of prior “trends”

• Process Model Prior

X = O +

where is “model error”, “bias”, “offset”

• [ Y | X , ] is measurement error model:

Y = X + e

• Substitution yields [ Y | O , , ]

Y = O + + e

• Modeling is crucial (I have seen set to 0)

Page 29: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

3) Model output as “observations”

• Data Model: [ Y, O | X , ] ( = [ Y | X, ] [ O | X , ])

• [ O | X , ] to include “bias, offset, ..”

• Previous approach: start by constructing

[ X | O , ]

This approach: construct [ O | X , ] • Model for “bias” a challenge in both cases• This is not uncommon, though not always

made clear

Page 30: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

A Bayesian Approach to Multi-model Analysis and Climate Projection

(Berliner and Kim 2008, J Climate)

Climate Projection:

– Future climate depends on future, but unknown, inputs.

– IPCC: construct plausible future inputs, “SRES Scenarios” (CO2 etc.)

– Assume a scenario and get corresponding projection

Page 31: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Hemispheric Monthly Surface Temperatures

• Observations (Y) for 1882-2001.

Data Model: Gaussian with mean = true temp.

& unknown variance (with a change-point)• Two models (O): PCM (n=4), CCSM (n=1) for

2002-2197, and 3 SRES scenarios (B1,A1B,A2).

Data Model: assumes O’s are Gaussian with mean = t + model biast (different for the two models) and unknown, time-varying variances (different for the two models)

• All are assumed conditionally independent

Page 32: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Notes (Freeze time)

• Data model for kth ensemble member from Model j:

Ojk = + bj + ejk

– is common to both Models

– bj is Model j bias

– E( ejk ) = 0 and variances of e’s depend on j

• Computer model model:

= X + ewhere E(e) = 0• Priors for biases, variances, and X• Extensions to different model classes (more ’s)

and richer models are feasible.

Page 33: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 34: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

IPCC (global) Us (NH)

Figure 10.4

Page 35: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.
Page 36: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Discussion: Which approach is best?

• Depends on form and quality of observations and models and practicality

• Develop prior for X from scientific model (part A) offers strong incorporation of theory, but practical limits on richness of [ X | ] may arise

• Model output as “observations”– Combining models: Just like different

measuring devices;– Nice for analysis & mixed (obs’ & comp.) design

– Need a prior [ X | ]

• Model output as realizations of prior “trends”– Most common among Bayesian statisticians– Combining models: like combining experts

Page 37: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Discussion: Models versus Reality

Need for modeling differences between X’s and O’s.

Model “assessment” (“validation”, “verification”) helps, but is difficult in complicated settings:

– Global climate models. Virtually no observations at the scales of the models.

– Tuning. Modify model based on observations.– Observations are imperfect, and are often

output of other physical models.– Massive data. Comparing space-time fields

Page 38: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.

Discussion, Cont’d

• Part C) Combining approaches– Example: Wikle et al 2001, JASA. Combined

observations and large-scale model output as data with a prior based on some physics

• Usually, many physical models. No best one, so it’s nice to be flexible in incorporating their information

Thank You!

Page 39: Combining Observations and Models: A Bayesian View Mark Berliner, OSU Stat Dept Bayesian Hierarchical Models Selected Approaches Geophysical Examples Discussion.