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Chemistry Databases and Reaction Networks for Stellar Atmospheres Inga Kamp & Sven Wedemeyer-Böhm Inga Kamp & Sven Wedemeyer-Böhm • CO in the Sun as a motivation • Chemical networks: various approaches & solvers • Implementation in CO 5 BOLD • Rate quality and completeness of the network • Prospects for larger networks and different species
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Chemistry Databases and Reaction Networks for Stellar Atmospheres

Feb 02, 2016

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Chemistry Databases and Reaction Networks for Stellar Atmospheres. Inga Kamp & Sven Wedemeyer-Böhm. CO in the Sun as a motivation Chemical networks: various approaches & solvers Implementation in CO 5 BOLD Rate quality and completeness of the network - PowerPoint PPT Presentation
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Page 1: Chemistry Databases and Reaction Networks for Stellar Atmospheres

Chemistry Databases and Reaction Networks for Stellar

Atmospheres

Inga Kamp & Sven Wedemeyer-BöhmInga Kamp & Sven Wedemeyer-Böhm

• CO in the Sun as a motivation• Chemical networks: various approaches & solvers• Implementation in CO5BOLD• Rate quality and completeness of the network• Prospects for larger networks and different species

Page 2: Chemistry Databases and Reaction Networks for Stellar Atmospheres

Collaborators:Sven Wedemeyer-Böhm (KIS, Freiburg)Bernd Freytag (Los Alamos)Matthias Steffen (AIP, Potsdam)Jo Bruls (KIS, Freiburg)Oskar Steiner (KIS, Freiburg)Werner Schaffenberger (Graz)

Page 3: Chemistry Databases and Reaction Networks for Stellar Atmospheres

CO observations in the SunCO observations in the Sun

CO (v = 1) fundamental and (v =2) first overtone bands suggest that the temperature decreases monotonically outwards - no temperature minimum

Solution: inhomogeneous atmosphere with coexisting hot and cool areas

Cool areas maybe caused by a runaway process: CO formation and subsequent enhanced CO cooling lead to a “cooling catastrophe”

[Ayres & Testerman 1981]

Page 4: Chemistry Databases and Reaction Networks for Stellar Atmospheres

Chemical NetworksChemical Networks

Three different approaches:

Instantaneous Chemical Equilibrium (ICE)

Chemical Equilibrium (CE)

Time dependent chemistry with advection (TD)

The chemistry depends on local quantities such as T, n andthe solution is calculated for t=∞ (stationary solution)

The chemistry depends on local quantities such as T, n andthe solution is advanced over t of the hydro timestep

The chemistry depends on local quantities such as T, n; the solution of the previous timestep is advected according to the hydrodynamical flow before the chemistry solution is advanced over t of the hydro timestep

Page 5: Chemistry Databases and Reaction Networks for Stellar Atmospheres

Two methods:

Equilibrium Constants

Rate Coefficients

P(i) = Pi + Pi+ + Pi− + wki

k

∑ Pk

P(i) = Pi + K i+

Pi

Pe−

+ K i−PiPe− + wki

k

∑Pi

wki

Pjwk

j

...Plwk

l

K(T)pk

Pij =Pi

w i

Pjw j

K p (T)

fictious partial pressurefor each atom(!)

n(i) = k jki

jk

∑ n jnk − ni kijk

jk

∑ n j particle densityfor each species(!)

and

Pi = nikTpre-tabulatedequilibriumconstants

parametrizedrate coefficients

Page 6: Chemistry Databases and Reaction Networks for Stellar Atmospheres

Three solvers:

Dvode

Newton-Raphson

Neural Networks

Initial value ODE solver for stiff systems with adjustable stepsize h

Iterative solution of a non-linear system of equations

Approximation of a set of non-linear continous functions with Nh neurons

N(T,n(H),n(e),m) = v jj

Nh∑ σ w jTT + w j

H n(H) + w jen(e) + u j[ ]

˙ y = f (t,y) ∩ y(t0) = y0

y n +1 = a0y n + a1yn−1 + a2y n−2 + a3y n−3 + a4 y n−4 + hb−1 f (t n +1,y n +1)

5th order BDF (Gear)

Fi(x1, x2,...,xn ) = 0

F(x + δx) = F(x) + J ⋅δx + O(δx 2)⇒ J ⋅δx = −F

xnew = xold + δx

Page 7: Chemistry Databases and Reaction Networks for Stellar Atmospheres

Three solvers:

Dvode

Newton-Raphson

Neural Networks

Initial value ODE solver for stiff systems with adjustable stepsize h

Iterative solution of a non-linear system of equations

˙ y = f (t,y) ∩ y(t0) = y0

y n +1 = a0y n + a1yn−1 + a2y n−2 + a3y n−3 + a4 y n−4 + hb−1 f (t n +1,y n +1)

5th order BDF (Gear)

Fi(x1, x2,...,xn ) = 0

F(x + δx) = F(x) + J ⋅δx + O(δx 2)⇒ J ⋅δx = −F

xnew = xold + δx

T

n(H)

n(e-)

Pi fictious

partial pressure

[Asensio Ramos & Socas-Navarro 2005]

Page 8: Chemistry Databases and Reaction Networks for Stellar Atmospheres

[Wedemeyer-Böhm, Kamp, Freytag, Bruls 2004]

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

Operator splitting:

1) Continuity equation (advection) 2) Rate equation (chemistry)

Chemistry is the limiting factor in computing time --> networks have to besmall to be feasible

COCO

chemistry advection chemistryadvection

tn-1 tn tn tn+1 tn+1

Page 9: Chemistry Databases and Reaction Networks for Stellar Atmospheres

[Wedemeyer-Böhm, Kamp, Freytag, Bruls 2004]

8 species: H, C, O, MH2, CO, CH, OH

27 reaction rates

Neutral-neutral reactions: Rij = A (T/300)B exp(-C/T) ninj

Three-body reactions: Rij = A (T/300)B ninjn(M)

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

Page 10: Chemistry Databases and Reaction Networks for Stellar Atmospheres

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

[Wedemeyer-Böhm, Kamp, Freytag, Bruls 2004]

8 species: H, C, O, MH2, CO, CH, OH

27 reaction rates

Neutral-neutral reactions: Rij = A (T/300)B exp(-C/T) ninj

Three-body reactions: Rij = A (T/300)B ninjn(M)

M

M

M

M

M

M

Page 11: Chemistry Databases and Reaction Networks for Stellar Atmospheres

C + OH branching ratiosO + CH Rij(300K) = 2.25 10-11

CO + H Rij(300K) = 1.81 10-11

CO + H C + O + H

5000 K range

Souces for reaction rates:critical evaluation of theliterature

UMIST (Le Teuff et al. 2000)Konnov’s combustion database(Konnov 2000)Baulch et al. (1972, 1976)Westley (1980)Ayres & Rabin (1996)

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

Page 12: Chemistry Databases and Reaction Networks for Stellar Atmospheres

5000 K range

combustion data

Ayres & Rabinderived rate fromdetailed balancebetween H+COand C+OH (5000K)

UMIST is based onWestley (1980),but differs by afactor 5!

We use originalrate by Westley(1980)

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

Page 13: Chemistry Databases and Reaction Networks for Stellar Atmospheres
Page 14: Chemistry Databases and Reaction Networks for Stellar Atmospheres

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

Parameter study for extended network:

H, C, O, M, H2, CO, CH, OH and 27 reaction rates

vs.

H, C, O, M, H2, CO, CH, OH, N, NH, N2, NO, CN and 58 reaction rates

result after ∆t = 0.1 s

Difference of CO number density in the (T,n) parameter range of the solar atmosphere

[Asensio Ramos et al. 2003]

Page 15: Chemistry Databases and Reaction Networks for Stellar Atmospheres

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

Average CO number density over height:

At heights above ~600 km, CE and ICE are no longer good approximations for the chemistry; TD becomes important

Page 16: Chemistry Databases and Reaction Networks for Stellar Atmospheres

The COThe CO55BOLD Chemical BOLD Chemical NetworkNetwork

TD/UICE

TD/CE

CE/UICE

no difference

Page 17: Chemistry Databases and Reaction Networks for Stellar Atmospheres

OutlookOutlook

• Add more species, OH and CH might be interesting for the Sun--> networks have to be tested and have to stay small.

• Use a solver that allows better optimization --> Heidelberg group (DAESOL, Bauer et al. 1997)

• More laboratory measurements!!!! Many rates are still guesses or vast extrapolation.

• Get better reaction rate databases (UMIST mostly for interstellar and circumstellar physics, Konnov’s database not well documented and maintanance unclear, database of equilibrium constants not publicly available).

Page 18: Chemistry Databases and Reaction Networks for Stellar Atmospheres

Thank you!