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Biodiversity and conservation Genetic diversity: within species variation (e.g corn [ Zea mays] in North vs. Central America) Species diversity: species richness Ecosystem diversity: variety of habitats
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Biodiversity and conservation Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America) Species diversity: species.

Dec 23, 2015

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Baldwin Wilkins
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Page 1: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Biodiversity and conservation

Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)

Species diversity: species richness

Ecosystem diversity: variety of habitats

Page 2: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Basic questions in biodiversity research:

for any plot of land (or patch of sea)

• Why does it contain this many plant and animal species, and not more, or less?

• Why is species Y common and species X rare?

Page 3: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

The standard answer:

• “it depends on the # of available niches”,

OR “it depends on….”:• Availability of resources / intensity

of competition, predation, infection, etc.

Page 4: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

The ‘neutral’ answer*:

• It depends on chance!• Diversity = f(immigration, extinction, evolution)

• Consider the example of a patch of tropical forest in Panama - how many tree species will it contain?

*Hubbell, S.P. 2001. The unified neutral theory of biodiversity and biogeography, Princeton U.P.

Page 5: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Tree diversity of a Panamanian forest

Satellite image of Barro Colorado Island, Panama (Image: NASA);Map source: www.geographic.org, used with permission

How many treescan island sustain?

How diverse is theforest “reservoir”?

Immigrationrate?

How fast are newtree species evolving?

Page 6: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Testing Hubbell’s model on Barro Colorado

Page 7: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Patterns of biodiversity

1. Latitudinal gradient in species richness

Page 8: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Global species richness(composite index)

Hotspots

div

ers

ity g

radie

nt

Page 9: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Biodiversity as a function of latitude(North and Central America)

Birds Beetles Ants

Labrador 81 Labrador 169 Alaska 7

New York 195 Massachusetts 2000 Iowa 73

Guatemala 469 Florida 4000 Trinidad 134

Page 10: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

S. Florida

North America

Page 11: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Diversity of North

American tree

species

Page 12: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Biodiversity gradients (tree species) in temperate coastal evergreen

forests

Page 13: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Biodiversity gradients in the temperate coastal evergreen forest of North

America

Page 14: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Ranges of newts and

salamandersin the

temperateevergreenforests of western North

America

Page 15: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Patterns of biodiversit

y

2. Altitudinal gradient

Page 16: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Altitudinal gradients

in bird species diversity

Page 17: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Species richness

andtemperatur

e range

Birds

Mammals

Snails

Page 18: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Biodiversity and moisture availability

Ants

Rodents

Page 19: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Species richness and productivity

N. American data

Page 20: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Habitat complexity(e.g. # of forest strata)

Low complexity(single stratum)

High complexity(multi-strata)

approx. equivalent tree species richness

Page 21: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Species diversity and habitat complexity

Page 22: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Conservation of biodiversity

• Are we engaged in a “biotic holocaust”?

• How many species are currently being lost?

• Why is biodiversity important?• How can species conservation be best

achieved?

Page 23: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Conservation of biodiversity

Extinction - the demise (locally or globally) of a species;Endangered species - a species or subspecies that is at risk of extinction throughout all or part of its range;Threatened (or vulnerable) species - possibly at risk of extinction in the near future

Page 24: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Species under threat: endemics:

(e.g. Hawai’ian honeycreepers)

• Generally very small populations

• At risk from habitat loss and introduction of aliens (particularly predators)

Page 25: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Island endemics under threat

• ~4 000 endemic or native plant and animal species live in the archipelago (cf. ~100 in British Isles).e.g. Canary Islands

Page 26: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Canary Islands endemics

• On average a new species invades every 17 days; a new serious pest invades on average every 6 months.

• Most problematical pests are the Barbary ground squirrel, the Corsican mouflon, and most recently, a beetle (“picudo rojo”), that feeds on native palms.

• 20 endemics are considered endangered; several have <100 individuals left.

Source: New York Times, Aug. 29, 2006, p. A4

Page 27: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Species under threat: widespread species and range

collapse

Population collapse is generally accompanied by (or caused by) range collapse (e.g. American bison; giant panda; black-footed ferret).

In most cases marginal populations, which may have distinctive genomes, are the only survivors.

Page 28: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

What is the current extinction rate?

Very difficult to demonstrate that a species is truly extinct (e.g. the ivory-billed woodpecker of the SE USA) so estimates of modern extinction rates vary widely.

Colinvaux notes that the rate is “incalculable”;

Myers (1979) says “we have no way of knowing … let alone an approximate guess”.

Page 29: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Biotic holocaust?Extreme estimates of current annual species loss: 40,000 (Myers, 1979) widely cited in 1980-90’s (e.g. by Al Gore) 27,000 - 100,000* (Wilson, 1992) *20% of all species gone by 2020! 250,000** (Ehrlich, cited in Stork, 1997) **all species gone by 2010-2025!

Page 30: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Sources for previous estimates

• Myers, N. 1979. The Sinking Ark. Pergamon Press.

• Wilson, E.O. 1992. The Diversity of Life.

• Stork, N.E. in: Wilson, E.O. et al., 1997. Biodiversity, pp. 41-68.

Page 31: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Alternative estimates• A much lower estimate of ~1400

extinctions per yr (=0.7% in 50 years) was derived by Lomborg (1998). This is still ~1500 times greater than estimated “background” rates from geological data

Lomborg (1998) The Skeptical Environmentalist: Measuring the Real State of the World. Cambridge U.P.

Page 32: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Modern extinctions: a fishy example

In the Nearctic realm 1033 species of fish are known to have inhabited streams and lakes in recent historic times. Of these, 27 (3%) are thought to be extinct, and 277 (28%) are endangered or vulnerable. The factors that caused these declines are habitat destruction, introduction of alien species, pollution, hybridization and over-harvesting.

Page 33: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Forest fragmentatio

n:Wisconsin

(1830-1950).

Area: 100 km2

1830 1882

1902 1950

shaded = forest white = agriculture

(prairie in 1830)

Page 34: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Forest fragmentation: Bahia (coastal S. Brazil)

dark = forest; light = agriculture

Page 35: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Habitat loss and extinction: model

predictions

Galapagos

Page 36: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

• 99% of primary forest of eastern US lost from 1800-2000; only one bird species extinct (Simberloff)

• 88% of forest along Atlantic coast of Brazil cleared in same period; none of the 171 animals have gone extinct (Brazilian Soc. Zoologists).

• See Lombock (1998) for discussion of these and other examples

How many species have gone extinct as a result of diminished habitat

area?

Page 37: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

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Page 38: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Forest fragmentation: Rondonia, Brazil

1975 1992100 km2

Page 39: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Forest fragmentation experiment, Amazonas

Thomas Lovejoy, Smithsonian Institute

Page 40: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Mammals* in rain forest fragments

0

5

10

15

20

Mammals

Intact forest

10 ha fragment

1 ha fragment

* These results are from trapping experiments and do not include bats and nocturnal canopy species. In intact forest 9 spp. were common; in 10 ha fragments, only one; in 1 ha fragments, all mammals were “uncommon”.

Data from Lovejoy et al. (1984); in Nitecki, M.H.“Extinctions”. Univ. Chicago Press

Page 41: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Why conserve?

• Intrinsic and aesthetic value of species (mosquitoes?)

• Economic value (gene pools, untapped riches)

Page 42: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

The rewards of conservation

0102030405060708090

100

1500's 1600's 1700's 1800's 1900's

Bird species

SavedExtinctions

*

*Global data; Source: New York Times Aug. 29, 2006; p. D3

Page 43: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Some of the saved

Chatham Island taiko Lear’s macaw

California condor Mauritius parakeet

Mauritius kestrel

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

Page 44: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Species conservation: the task ahead

“The threat ahead is massive. It’s like we’ve ridden our first wave on a surfboard and feel good about it, but look back and there’s a tsunami coming in.”

Dr. Stuart Pimm, a conservation ecologist at Duke University, quoted in the New York Times, Aug 29, 2006, p. D3.

Page 45: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

How conserve?

• Zoos and captive breeding (e.g. condors)

• Predator control (e.g. Chatham Is. taiko)

• Habitat preservation / restoration(e.g. Mauritius parakeet) for its own sake, or combined with sustainable economic diversification (e.g. turtle harvesting vs. cattle farming on the Amazon floodplain; the former retains the galeria forest).

• Compensatione.g. ranchers in Wyoming [for cattle killed by wolves]; farmers in Bahia, Brazil [for corn eaten by Lear’s parrot]

Page 46: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Predator control

Eradication scorecard (# island removals)e.g. mammals (all alien) have been eradicated on 68 of the 168 islands

in New Zealand; 41 introduced mammal populations have been eradicated on 27 islands off the Pacific coast of Mexico. Native plant and animal species have rebounded following eradications.

Source: Krajick. K. 2005. Science 310, p. 1410-1413.

Pre

Post

Page 47: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Predator control -> habitat restoration

e.g. removal of goats on Santiago Island (Galapagos) leads to recovery of native vegetation.

Source: Krajick. K. 2005. Science 310, p. 1410-1413.

Pre

Post

goat exclosure

Page 48: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Species need

space!

How big a fragment would conserve 95% of

the species over a 50-yr period?

Ans. = 100,000 ha.

[100 km x 100km!]New Scientist 8-14 November, 2003, p.15;

Based on surveys of avifauna in Amazonas

Page 49: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Applications of island

biogeography theory to

habitat conservatio

n

Good choice Poor choice

Page 50: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Corridors and conservation

• Experiment to determine effects of corridors between open patches on plant biodiversity in longleaf pine (Pinus palustris) forest in South Carolina. Patches created in 2000.

Source: Dametsch, E. et al., 2006. Science 313, 1284 - 1286

Page 51: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Corridor experiment results

Source: Dametsch, E. et al., 2006. Science 313, 1284 - 1286

Connected patches have ~20% more plant spp. than unconnected

patches; few weedy exotics

Page 52: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Do the ecological

reserves in BC display these

principles?

Goosegrass Creek(Kootenays)

E.R. #55

Haynes Lease(Okanagan) E.R. #100

1 km

Page 53: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

Future challenges: climate change

In alpine areas timberline is creeping upwards by a few meters per decade; alpine species are therefore occupying smaller and smaller refuges. In NZ, for example, it is predicted that 80% of alpine islands will be wiped out in this century, and 200-300 alpine plant species will go extinct*. How do we develop conservation strategies that are nimble enough to deal with climate change?

*Halloy, S.R.P., and Mark, A.F. 2003. Arctic, Antarctic, and Alpine Research, 35, 248-254.

Page 54: Biodiversity and conservation  Genetic diversity: within species variation (e.g corn [Zea mays] in North vs. Central America)  Species diversity: species.

A more local example of this problem….

Lassen Peak, northern California

1930

2006

Subalpine rodents, (e.g. Zapus spp.) are now found 700m higher than they were a century ago; the altitudinal ranges of Alpine chipmunks and pikas have shrunk correspondingly

Pacific jumping mouse(Zapus trinotatus)

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

Pika(Ochotona princeps)

Graphics: NY Times (Nov. 7, 2006); Wikipedia