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Biodiverse, a tool for the analysis of biological and other diversity Shawn Laffan BEES, UNSW
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Biodiverse, a tool for the analysis of biological and other diversity Shawn Laffan BEES, UNSW.

Dec 15, 2015

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Page 1: Biodiverse, a tool for the analysis of biological and other diversity Shawn Laffan BEES, UNSW.

Biodiverse, a tool for the analysis of biological and other diversity

Shawn Laffan

BEES, UNSW

Page 2: Biodiverse, a tool for the analysis of biological and other diversity Shawn Laffan BEES, UNSW.

What does it do?

• Linked visualisations• Spp list, geography, phylogeny, genetic

• Moving window analyses• Cluster / region grower analyses• Randomisations• Matrix visualisation

• Arbitrarily complex spatial windows

Page 3: Biodiverse, a tool for the analysis of biological and other diversity Shawn Laffan BEES, UNSW.

The software

• It is free and open source• http://www.purl.org/biodiverse

• ~50k lines of Perl code

• Discussion forum at• groups.google.com/group/biodiverse-users

Page 4: Biodiverse, a tool for the analysis of biological and other diversity Shawn Laffan BEES, UNSW.

• The remainder of the talk was a demonstration of the software.