A unified framework to combine disperate data types in species distribution modelling A unified framework to combine disperate data types in species distribution modelling Slides on Slideshare: http://www.slideshare.net/oharar/bessfe-talk-2014 Bob O’Hara 1 Petr Keil 2 Walter Jetz 2 1 BiK-F, Biodiversity and Climate Change Research Centre Frankfurt am Main Germany Twitter: @bobohara 2 Department of Ecology and Evolutionary Biology Yale University New Haven, CT, USA
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A unified framework to combine disperate data types in species distribution modelling
A unified framework to combine disperate datatypes in species distribution modelling
Slides on Slideshare:http://www.slideshare.net/oharar/bessfe-talk-2014
Bob O’Hara1 Petr Keil 2 Walter Jetz2
1BiK-F, Biodiversity and Climate Change Research CentreFrankfurt am Main
GermanyTwitter: @bobohara
2Department of Ecology and Evolutionary BiologyYale University
New Haven, CT, USA
A unified framework to combine disperate data types in species distribution modelling
A ”Real” Curve
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A Curve
A unified framework to combine disperate data types in species distribution modelling
Approximated with a Discretised Curve
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A CurveDiscrete
A unified framework to combine disperate data types in species distribution modelling
Better: linear interpolation
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A CurveDiscreteInterpolated
A unified framework to combine disperate data types in species distribution modelling
With more points, the approximations improve
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A CurveDiscreteInterpolated
A unified framework to combine disperate data types in species distribution modelling
What does this have to do with distribution models?
A unified framework to combine disperate data types in species distribution modelling
What does this have to do with distribution models?
This is how SDMs see the world:
source: http://bit.ly/1l8sG7M
Map produced by Peter Blancher, Science and Technology Branch, Environment Canada, based on data from the
North American Breeding Bird Survey
A unified framework to combine disperate data types in species distribution modelling
DiscretionProjected maps look like this:
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A unified framework to combine disperate data types in species distribution modelling
Can we be less discrete?This might be better:
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A unified framework to combine disperate data types in species distribution modelling
Point Processes: Model
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Model of where individuals are Ahigher intensity means moreindividuals
A unified framework to combine disperate data types in species distribution modelling
Pointless Processes?
How do we use this approach?
A unified framework to combine disperate data types in species distribution modelling
Need to use talk about sausage
Lincolnshire Sausage! by Caro Wallis, https://www.flickr.com/photos/carowallis1/806455819
A unified framework to combine disperate data types in species distribution modelling
Point processes
Represent density by a surface, with intensity λ(s)Number in area A follows Poisson distribution with mean µ(A):
µ(A) =
∫Aλ(s)ds
Raw Blood Sausage by Carlos Lorenzo, https://www.flickr.com/photos/carlos lorenzo/447670758
A unified framework to combine disperate data types in species distribution modelling
Intense Models
Model the expected density through the intensity:
log(λ(s)) =∑
βjXj(s) + ν(s)
Xj(s) are covariates (also continuous in space)ν(s) is a residual spatial term
Gastrocast #91 by Neal Foley, https://www.flickr.com/photos/86571141@N00/345595467
A unified framework to combine disperate data types in species distribution modelling
Point Processes: Model
In practice, approximate the surface with triangles
A unified framework to combine disperate data types in species distribution modelling