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Basic Crystallography
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Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Dec 22, 2015

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Page 1: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Basic Crystallography

Page 2: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw a line that was no line; space that was not space.......I shrieked aloud in agony, " Either this is madness or it is Hell."

"It is neither," calmly replied the voice of the Sphere, "it is Knowledge; it is Three Dimensions: open your eye once again and try to look steadily........

Page 3: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

"Distress not yourself if you cannot at first understand the deeper mysteries of Spaceland. By degrees they will dawn upon you."

On the occasion of the Square's first encounter with three dimensions, from E. A. Abbott's Flatland, (1884).

Page 4: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Repetition = Symmetry

Types of repetition:

Rotation Translation

Page 5: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Rotation

What is rotational symmetry?

Page 6: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Imagine that this object will be rotated (maybe)

Page 7: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Was it?

Page 8: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

The object is obviously symmetric…it has symmetry

Page 9: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

The object is obviously symmetric…it has symmetry

Can be rotated 90° w/o detection

Page 10: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

…………so symmetry is really

doing nothing

Page 11: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Symmetry is doing nothing - or at least doing something so that it looks like nothing was done!

Page 12: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What kind of symmetry does this object have?

Page 13: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What kind of symmetry does this object have?

4

Page 14: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What kind of symmetry does this object have?

4

m

Page 15: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What kind of symmetry does this object have?

4

m

Page 16: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What kind of symmetry does this object have?

4

m

Page 17: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What kind of symmetry does this object have?

4

m

4mm

Page 18: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Another example:

Page 19: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Another example:

6

m

6mm

Page 20: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

And another:

Page 21: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

And another:

2

2

Page 22: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What about translation?

Same as rotation

Page 23: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

What about translation?

Same as rotation

Ex: one dimensional array of points

Translations are restricted to only certain values toget symmetry (periodicity)

Page 24: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

2D translations

Lots of common examples

Page 25: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Each block is represented by a point

Page 26: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

This array of points is a LATTICE

Page 27: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Lattice - infinite, perfectly periodic array of points in a space

Page 28: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Not a lattice:

Page 29: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Not a lattice:

Page 30: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Not a lattice - ….some kind of STRUCTURE becuz not just points

Page 31: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Another type of lattice - with a different symmetry

rectangular

Page 32: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Another type of lattice - with a different symmetry

square

Page 33: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Another type of lattice - with a different symmetry

hexagonal

Page 34: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Back to rotation - This lattice exhibits 6-fold symmetry

hexagonal

Page 35: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Periodicity and rotational symmetry

What types of rotational symmetry allowed?

Page 36: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Periodicity and rotational symmetry

Suppose periodic row of points is rotated through±

Page 37: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Periodicity and rotational symmetry

To maintain periodicity,

vector S = an integer x basis translation t

S

tt

Page 38: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

vector S = an integer x basis translation tvector S = an integer x basis translation tt cos = S/2 = mt/2t cos = S/2 = mt/2

m cos axis

2 1 0 2 π 11 1/2 π/3 5π/3 60 0 π/2 3π/2 4-1 -1/2 2π/3 4π/3 3-2 -1 - ππ 2

m cos axis

2 1 0 2 π 11 1/2 π/3 5π/3 60 0 π/2 3π/2 4-1 -1/2 2π/3 4π/3 3-2 -1 - ππ 2

S

tt

Page 39: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

m cos axis

2 1 0 π 11 1/2 π/3 5π/3 60 0 π/2 3π/2 4-1 -1/2 2π/3 4π/3 3-2 -1 - π - π2

m cos axis

2 1 0 π 11 1/2 π/3 5π/3 60 0 π/2 3π/2 4-1 -1/2 2π/3 4π/3 3-2 -1 - π - π2

Only rotation axes consistent with lattice periodicity in 2-D or 3-DOnly rotation axes consistent with lattice periodicity in 2-D or 3-D

Page 40: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

We abstracted points from the shape:

Page 41: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

We abstracted points from the shape:

Now we abstract further:

Page 42: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Now we abstract further:

This is a UNIT CELL

Page 43: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Now we abstract further:

This is a UNIT CELL

Represented by two lengths and an angle

…….or, alternatively, by two vectors

Page 44: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Basis vectors and unit cells

T = t a + t ba b

a and b are the basis vectors for the lattice

ab

T

Page 45: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

In 3-D:

a

b

a, b, and c are the basis vectors for the lattice

c

Page 46: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

In 3-D:

T = t a + t b + t ca b

a

b

T

a, b, and c are the basis vectors for the lattice

c

c

Page 47: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

a

b

c

Lattice parameters:

Page 48: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

The many thousands of lattices classified into crystal systems

System Interaxial Axes Angles

Triclinic ≠ ≠ ≠ 90° a ≠ b ≠ c

Monoclinic = = 90° ≠ a ≠ b ≠ cOrthorhombic = = = 90° a ≠ b ≠ c

Tetragonal = = = 90° a = b ≠ c

Cubic = = = 90° a = b = cHexagonal = = 90°, = 120° a = b ≠ c

Trigonal = = 90°, = 120° a = b ≠ c

Page 49: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

The many thousands of lattices classified into crystal systems

System Minimum symmetry

Triclinic 1 or 1Monoclinic 2 or 2Orthorhombic three 2s or 2sTetragonal 4 or 4Cubic four 3s or 3sHexagonal 6 or 6Trigonal 3 or 3

Page 50: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

Within each crystal system, different types ofcentering consistent with symmetry

System Allowed centering

Triclinic P (primitive) Monoclinic P, I (innerzentiert) Orthorhombic P, I, F (flächenzentiert), A (end centered) Tetragonal P, I Cubic P, I, F Hexagonal P Trigonal P, R (rhombohedral centered)

The 14 Bravais lattices

Page 51: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

For given lattice, infinite number ofunit cells possible:

Page 52: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.

When choosing unit cell, pick:

Simplest, smallest Right angles, if possible Cell shape consistent with symmetry

Page 53: Basic Crystallography. An unspeakable horror seized me. There was a darkness; then a dizzy, sickening sensation of sight that was not like seeing; I saw.