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Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Jan 13, 2016

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Amy Gregory
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Page 1: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.
Page 2: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Arc Marine Data Model Exercise

• Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/

• What to turn in:– Screen snapshot of what your ArcMap session looks like

at the end of Section 4 (including dynseg referencing)

– Answers to 2 simple questions at end of Section 4 (which cruise? which vehicle?)

– Can put all of the above in a single MS-Word document, labeled with your NAME please!

• Due in Dropbox, April 28th, 6:00 p.m.

Page 3: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Midterm on Wednesday

Page 4: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Midterm• May start off with multiple choice

• Bulk will be short answer/short essay

• Lecture PPTs and your notes

• Will not include – Labs or Arc Marine exercise

– Journal articles

Page 5: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Major concepts

• Representations• Object vs Field• Model, data model, analysis model• Data models

– UML terminology, basic procedure from• Reality --> conceptual --> logical --> physical

– Customized ArcGIS data models• For enterprise GIS

• Analysis Models– Binary, ranking, rating, weighted rating

Page 6: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Major concepts - cont.

• Geodatabase – what it is, why it’s important

• Topology, Spatial Analysis – what they are, why they are important, how they relate

• Web GIS from guest lectures• Object orientation

– Identity, inheritance, encapsulation

Page 7: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

GIS Analysis Models

Page 8: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

GIS Analysis ModelGraphical modeling framework tied to actual GIS functions

Functions, Data, Numerical Models, Tools, etc.

Page 9: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

ArcGIS 9 Model Builder

Page 10: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

ArcGIS 9 Model Builder

Page 11: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

From Designing Gdbs - Ch 7Arc Hydro & HEC-RAS

Hydrologic Engineering Centers River Analysis System

See also “Demo 2” from Apr 12 lecture

Page 12: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Arc Marine & Model Arc Marine & Model BuilderBuilder

From Brett Lord-Castillo, M.S. thesis, and Lord-Castillo et al., Transactions in GIS, in review, 2009

Page 13: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Arc Marine & Model Arc Marine & Model BuilderBuilder

Models to automatically extract environmental data Models to automatically extract environmental data layers for spatio-temporal analysislayers for spatio-temporal analysis

Model: Get-SSTModel: Get-SST

AML to Modeler conversion at ArcGIS 9.xAML to Modeler conversion at ArcGIS 9.x

From Marine Data Model Technical Workshop, 2005 ESRI UC, Halpin et al.

Page 14: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

The Anatomy of a GIS Analysis Model

Berry, Chs. 24-26• compare several GIS models to illustrate

different analysis modeling approaches• compare varying levels of results from

these models• GIS is only as good as its data• GIS is only as good the expression of its

data

Page 15: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

“It’s All Downhill from Here”

• the case for landslide susceptibility• terrain steepness (high slope/low slope)• soil type (unstable/stable)• vegetation cover (bare/abundant)

Page 16: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

BINARY model:codes cells 1 for susceptible

0 for unsusceptiblemultiplicative: cells must meet all 3 criteria

Page 17: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

BINARY model:multiplies maps for Y/N solution

RANKING model:adds maps for a range of solutions

Page 18: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

RATING model:averages maps for an even greater range of

solutionsscale of 1 to 9 (most) for each condition

Page 19: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

RATING model:for example one cell might be9 in SL layer, 3 in SO, 3 in CO

(9 + 3 + 3) / 3 = 5 or moderate susc.

Page 20: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Weighted Rating Model

• suppose SL is considered to be 5 times more important than SO or CO?

• so one cell might be:9 * 5 in SL layer, 3 in SO, 3 in CO

• ((9*5)+ 3 + 3) / 3 = 17

– fairly high susc.

Page 21: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

4 Models for Landslide Susceptibility:Banana Bread to Fruit Cake!

• BINARY

– 1 for SL, 0 for SO, 0 for CO

– 1 * 0 * 0 = 0 NO susceptibility• RANKING

– 1 for SL, 0 for SO, 0 for CO

– 1 + 0 + 0 = 1 LOW susceptibility• RATING

– 9 for SL, 3 for SO, 3 for CO

– (9 + 3 + 3) / 3 = 5 MODERATE susceptibility• WEIGHTED RATING

– 9 for SL, 3 for SO, 3 for CO

– ((9*5) + 3 + 3) / 3 = 17 HIGH susceptibility

Page 22: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Banana Bread to Fruitcake• data input to the models - constant• logic of models or conceptual fabric of

process - different• rating models most “robust”

– continuum of responses/answers

– foothold to extend model even further• from critical to contributing factors

Page 23: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Extension of Landslide Model to Risk:Consider Proximity to Features That we Really

Care About

Page 24: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Extending a GIS Model ( cont. )

• Risk – variable width road buffers as a function of SLOPE– buffer widens in steep areas

• Extending hazard to risk– weighted roads based on slopes– weight roads based on traffic volume, emergency routes, etc.– buildings: commercial, residential, etc.– economic value of threatened features, potential resource

loss

Page 25: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Additional Factors• in addition to or instead of SL, SO, CO other

critical factors may be considered:– physical: bedrock type, depth to faulting

– disturbance: construction areas, gophers?

– environmental: storm frequency, rainfall patterns

– seasonal: freezing and thawing cycles in spring

– historical: past earthquake events

Page 26: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Benthic Habitat Example:Parameters Important to Benthic

Species• Water depth

• Sediment depth

• Substrate type

• Sediment type

• Exposure

• Rugosity/BPI

• Slope/Aspect

• Water chemistry• Water temperature• Voids/caverns (size

& depth)• Vegetation• Biotic interactions• Anthropogenic

factors

What can we measure directly, interpret, or derive?

Deidre Sullivan, MATE Center, Monterey, CA

Page 27: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Bathymetric grid created from multibeam x,y,z data

Monterey Bay data courtesy of MATE Center and Cal-State Monterey Bay

Page 28: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Slope grid derived from bathymetry

Page 29: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Aspect grid derived from bathymetry

Page 30: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Measure of surface area to planar area

Rugosity grid derived from bathymetry using the Benthic

Terrain Modeler

Page 31: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Rugosity• Measure of how rough or bumpy a surface is, how convoluted and complex• Ratio of surface area to planar area

Graphics courtesy of Jeff Jenness, Jenness Enterprises, and Pat Iampietro, CSU-MB

Surface area based onelevations of 8 neighbors

3D view of grid on the left Center pts of 9 cells connectedTo make 8 triangles

Portions of 8 triangles overlapping center cellused for surface area

Page 32: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Bathymetric Position Index (BPI)derived from bathymetry using the

Benthic Terrain Modelerdusk.geo.orst.edu/djl/samoa/tools.html

Page 33: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Bathymetric Position Index(from TPI, Jones et al., 2000; Weiss, 2001; Iampietro & Kvitek, 2002)

Measure of where a point is in the overall land- or “seascape”Compares elevation of cell to mean elevation of neighborhood

(after Weiss 2001)

Page 34: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Substrate type interpreted from Backscatter or Side Scan Sonar

images

Page 35: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Building a Suitability Model

• What do we know about the species’ habitat requirements?

• Can we describe these habitat requirements using GIS data?

• Do we have enough information? Is it at the right scale?

• Does the model work?

Page 36: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Validate the

model

BPI

Bathymetric Position Index

Benthic Terrain Modeler&

Page 37: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Using Standard Deviation to Classify Values

68%

95%

99%

1

23

Page 38: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Binary Model(Multiplication)

*Rugosity greater than 1.2 SD

1 0

=1 0

*BPI greater than 1.5 SD =

Areas that satisfy both criteria

Page 39: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Ranking Model(Addition)

+Rugosity is greater than 1.2 SD

1 0

=1 0

+BPI greater than 1.5 SD =

Ranking because it develops an ordinal scale of increasing suitability

1

02

Page 40: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Rating Model

+Rugosity is divided into 4 classes by SD then reclassified to values of 1, 2, 3, 4

1 0 =1 0

2 BPI is divided into 4 classes by SD then reclassified to values of 1, 2, 3, 4

Rating because it develops a relative rating based on the simple average of the factors

1

Uses a consistent scale with more than two states to characterize the habitat (simple average)

Page 41: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Weighted Rating Model

+Rugosity is divided into 4 classes by SD then reclassified to values of 1, 2, 3, 4

1 0 =1 0

2 BPI is divided into 4 classes by SD then reclassified to values of 1, 2, 3, 4

Weighted rating develops a relative ranking with the most critical factors given more weight

1

Uses a consistent scale with more than two states to characterized the habitat, however it is a weighted average

* 5)(

Page 42: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Binary Ranking

Rating Wt. Rating

How do they compare?

Page 43: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Model Validation

Page 44: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.
Page 45: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

“Mapematics” Rating models considered most “mapematical”

– how were weighting factors decided?–guess-timates?–derived from predictive statistical technique?

need right set of maps/data over a large area

–based on an experiment in the field? lots of time, funding, energy

Review literature for existing mathematical model and make them “mapematical” (i.e., use them!)

Page 46: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

GEO 580 Example

Predicting presence of the sensitive lichen Usnea longissima in managed landscapes

Dylan Keon GEO 580 project

Page 47: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.
Page 48: Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.

Gateway to the Literature

• Joerin, F., Using GIS and outranking multicriteria analysis for land-use suitability assessment, Int. J. Geog. Inf. Sci., 15 (2), 153-174, 2001.

• Jankowski, P., and T. Nyerges, GIS-supported collaborative decision making: Results of an experiment, Annals AAG, 91 (1), 48-70, 2001.

• Chau, K.T. et al., Landslide hazard for Hong Kong using landslide inventory and GIS, Computers & Geosciences, 30: 429-443, 204.