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Russ Daly, DVM, MS, DACVPM Extension Veterinarian State Public Health Veterinarian South Dakota State University © 2013 Board of Regents, South Dakota State University iGrow.org Antimicrobial Resistance in Animal Populations
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Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

Jun 22, 2020

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Page 1: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

Russ Daly, DVM, MS,

DACVPM

Extension VeterinarianState Public Health VeterinarianSouth Dakota State University

© 2013 Board of Regents, South Dakota State University

iGrow.org

Antimicrobial

Resistance in

Animal

Populations

Page 2: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.orghttp://www.cdc.gov/drugresistance/threat-report-2013/

Page 3: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.orghttp://www.cdc.gov/drugresistance/threat-report-2013/

Page 4: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org© 2013 Board of Regents, South Dakota State University iGrow.org

Page 5: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org© 2013 Board of Regents, South Dakota State University iGrow.org

Page 6: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Antimicrobial Resistance Patterns

in Animals

National Antimicrobial Resistance Monitoring System

(NARMS) data

Human enteric bacteria

SDSU Animal Disease Research and Diagnostic

Laboratory data

Animal pathogens

Diagnostic submissions

© 2013 Board of Regents, South Dakota State University iGrow.org

Page 7: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

National Antimicrobial Resistance

Monitoring System (NARMS)

Established in 1996

Collaboration among:

Food and Drug Administration (FDA)

Centers for Disease Control and Prevention (CDC)

US Dept. of Agriculture (USDA)

Monitors Abx susceptibility among enteric bacteria:

Humans (CDC)

Retail meats (FDA)

Food animals (USDA)

© 2013 Board of Regents, South Dakota State University iGrow.org

Page 8: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

NARMS Pathogens Monitored

Humans (CDC) – clinical illness

Salmonella (typhi & non-typhi) – E. coli O157 –

Shigella – Campylobacter - Vibrio

Retail meats (FDA)

Chicken breasts, ground turkey, ground beef, pork

chops

Salmonella – Campylobacter – E. coli - Enterococcus

Food animals (USDA)

Chickens, turkeys, cattle, swine

Salmonella – Campylobacter – E. coli - Enterococcus

© 2013 Board of Regents, South Dakota State University iGrow.org

Page 9: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

© 2013 Board of Regents, South Dakota State University iGrow.org

Chicken

Pork chops

State collected

# of antibiotics that isolates were resistant to

Bacteria ND SD Total 0 1 2 3 4 5 # of MDR isolates

Salmonella 0 0 0 - - - - - - - E. coli 7 8 15 12 2 - - - 1 1/15 Enterococcus 4 10 14 1 1 7 3 - 1 4/14

State

collected # of antibiotics that isolates were resistant to

Bacteria ND SD Total 0 1 2 3 4 5 6 7 8 # of MDR isolates

Salmonella 0 2 2 - - - 1 - - 1 - - 2/2 Campylobacter 1 6 7 4 1 1 - 1 - - - - 1/7 E. coli 6 12 18 5 4 2 2 3 1 - - 1 7/18 Enterococcus 2 5 7 - 1 2 1 - 1 1 1 - 4/7

State

collected # of antibiotics that isolates were resistant to

Bacteria ND SD Total 0 1 2 3 4 5 6 7 8 # of MDR isolates

Salmonella 0 0 0 - - - - - - - - - - E. coli 6 9 15 7 1 3 2 1 1 - - - 4/15 Enterococcus 4 11 15 - - 2 10 1 1 - - 1 4/14

SDSU’s role in NARMS

Ground

beef

Page 10: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

NARMS Pathogens Monitored

Humans (CDC) – clinical illness

Salmonella (typhi & non-typhi) – E. coli O157 –

Shigella – Campylobacter - Vibrio

Retail meats (FDA)

Chicken breasts, ground turkey, ground beef, pork

chops

Salmonella – Campylobacter – E. coli - Enterococcus

Food animals (USDA)

Chickens, turkeys, cattle, swine

Salmonella – Campylobacter – E. coli -

Enterococcus

© 2013 Board of Regents, South Dakota State University iGrow.org

https://www.fda.gov/AnimalVeterinary/SafetyHealth/Antimicr

obialResistance/NationalAntimicrobialResistanceMonitoringS

ystem/ucm416741.htm

Page 11: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration
Page 12: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Veterinary Diagnostic Laboratories

© 2013 Board of Regents, South Dakota State University iGrow.org

Page 13: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Veterinary Diagnostic Laboratories

© 2013 Board of Regents, South Dakota State University iGrow.org

Page 14: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

SDSU Animal Disease Research

and Diagnostic Laboratory - 2018

24,949 case accessions in 2018

~ 500,000 test procedures/yr.

> 16,000 bacteriology

procedures/yr.

> 1,800 antimicrobial

resistance panels

© 2013 Board of Regents, South Dakota State University iGrow.org

Page 15: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Ampicillin Resistance: SDSU

ADRDL

© 2013 Board of Regents, South Dakota State University iGrow.org

*(ave. no. of isolates/yr.)

Page 16: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Ceftiofur Resistance: SDSU ADRDL

© 2013 Board of Regents, South Dakota State University iGrow.org

*(ave. no. of isolates/yr.)

Page 17: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Enrofloxacin Resistance: SDSU

ADRDL

© 2013 Board of Regents, South Dakota State University iGrow.org

*(ave. no. of isolates/yr.)

*(ave. no. of isolates/yr.)

Page 18: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Kansas State University VDL, 2005-

2018

Main bacterial cattle pneumonia pathogens

Mannheimia hemolytica

Pasteurella multocida

Histophilus somni

Resistance flat from 2005-2009

2009-2018: resistance increasing for common cattle

antibiotics

Enrofloxacin, florfenicol, tilmicosin, tulathromycin

© 2013 Board of Regents, South Dakota State University iGrow.org

Page 19: Antimicrobial Resistance in Animal - Amazon S3s3.amazonaws.com/.../6_Animal-Abx-resistance.pdf · National Antimicrobial Resistance Monitoring System (NARMS) Established in 1996 Collaboration

iGrow.org

Diagnostic Sample Considerations

Not considered systematic surveillance

May represent “the worst of the worst”

Treatment failures

Unusual clinical presentations

Multiple pathogens

Submission type depends on:

Climate/weather conditions

Experience of veterinarians

Economic conditions: + and -

© 2013 Board of Regents, South Dakota State University iGrow.org