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Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond angles
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Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Jan 15, 2016

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Page 1: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Alkanes

Acyclic: CnH2n+2

Cyclic (one ring): CnH2n

Bicyclic (two rings) : CnH2n-2

Only single bonds, sp3 hybridization, close to tetrahedral bond angles

Page 2: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Physical properties

• Boiling points– Lower than other organic molecules of same

size.– Lower attractive forces between molecules

than in alcohols.methane -164 oC water 100 oC

hexane 68.7 oC 1-pentanol 137 oC

Page 3: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Intermolecular Forces• Ionic Forces

• Hydrogen Bonding

• Dipole Dipole Forces

• Dispersion Forces

Dispersion Forces: due to fluctuating motion of the electrons in a molecule. Motion in one molecule is correlated with that in the other molecule.

Strength

Page 4: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Dispersion Forces and Molecular Structure

Branching decreases surface area, reduces dispersion forces and, thus, boiling point.

Page 5: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Molecular Structure and Heat of Combustion

8CO2 + 9H2O

-5470.6 -5451.8

Difference in heats of combustion indicates a greater stability of branched structures.

18.8 kJ

Page 6: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Isomerism and Naming

• Hexane

CH3CH2CH2CH2CH2CH3

Page 7: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

2-methylpentane

CH3CH2CH2CHCH3

CH3

Page 8: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

CycloAlkanes

Cl

1-chloro-3-methylcyclohexane 1,2-diisopropylcyclobutane 1-methyl-2-propylcyclopropane

Page 9: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Bicycloalkanes

Parent name: name of alkane with same number of carbons.

Number from bridgehead along largest bridge. If substituent choose bridgehead to assign low number to substituent.

Size of bridges indicated by number of carbons in bridge.

Page 10: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Examples of numbering

Cl

6-chlorobicyclo[3.1.1]heptane 2,7-dimethylbicyclo[4.2.2]decane

1

2

5 7

Page 11: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Conformations

• Rotations about single bonds produce different conformations.

Staggered Conformation. Eclipsed Conformation.

60

Page 12: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Newman Projections

Eclipsed Conformation.Staggered Conformation.

More stable!Less stable.

Page 13: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

CH3CH2CH2CHCH3

CH3

Rotational Profile of ethane

Page 14: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

What are the forces in a molecular structure?

Bond angle strain: when a bond angle, A-B-C, diverges from the ideal (180, 120, 109)

Torsional strain: Strain between groups on adjacent atoms.

A-B-C-D. Worst when eclipsed; best when staggered.

Page 15: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Rotation about C2 – C3 in butane

H

CH3

H

H

CH3

H

Anti conformation Methyls 180 deg, lower energy

120 deg.

Gauche conformation, Methyls closer, 60 deg, more repulsion, higher energy

H3C

H

H

H

CH3

H

Gauche!!

View from here yields view below.

View from here yields view below.

Anti!!

Page 16: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Energy Profile for Rotation in Butane

Three valleys (staggered forms) 120 apart; Three hills (eclipsed) 120 apart.

Page 17: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Problem: Rotational profile of 2-methylbutane about C2-C3.

Me

H

Me

H

Me

H

First, staggered structures.

Me

H

Me

Me

H

H

Me

H

Me

H

H

Me

Rotate the front Me group.

Relative energies….

18060 300

Page 18: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Now, eclipsed….

Me

H

Me

H

Me

H

This was the high energy staggered structure,180 deg. Shown for reference only.

Me

H

Me

H

HMe

Me

H

Me

H

MeH

120 240180

Me

H

Me

Me

HH

Me

H

Me

Me

HH

0 360 = 0

Now relative energies…..

Page 19: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Now put on diagram…

Me

H

Me

H

MeHMe

H

Me

H

HMe

Me

H

Me

Me

HH Me

H

Me

Me

HH

Me

H

Me

H

Me

H

Me

H

Me

Me

H

H

Me

H

Me

H

H

Me

0 180 36060 120 240 300

staggered

eclipsed

Page 20: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Conformations of cycloalkanes: cyclopropane

Planar ring (three points define a plane); sp3 hybrization: 109o.

Hydrogens eclipsing. Torsional angle strain.

Bond angle strain. Should be 109 but angle is 60o.

Cyclopropane exhibits unusual reactivity for an alkane.

Page 21: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Conformation of cyclobutane

Planar: eclipsing, torsional strain and bond angles of 90o

Folded, bent: less torsional strain but increased bond angle strain

Fold on diagonal

Page 22: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Cyclobutane molecular dynamics

Page 23: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Cyclopentane

Page 24: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Cyclohexane

planar: bond angle 120, eclipsed.

Chair conformation

Boat conformation

Ideal solution: Everything staggered and all angles tetrahedral.

Page 25: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Chair Conformation

Axial:

Equatorial:

Page 26: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Axial and EquatorialAxial Up/Equatorial

Down: (A/E)

Equatorial Up/Axial Down: (E/A)

E/A

E/A

E/A

A/E

A/E

A/E

Page 27: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Ring Flips

Chair

Boat or

Twisted Boat

Chair

A becomes E

E becomes A

Up stays Up

Down stays Down

Page 28: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Substituents: Axial vs Equatorial

Substituent, R G Preference for Equatorial

K at 25 deg

-CH3, methyl 7.28 kJ/mol 18.9

-CH2CH3, ethyl 7.3 19.

-CH(CH3)2, iso propyl 9.0 38.

-C(CH3)3, tert butyl 21.0 4.8 x 103

R

R

equatorialsubstituent

axial substituent

Page 29: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

REach repulsion is still about 3.6 kJ. Note that the gauche interaction in butane is about 3.8.

Substituent InteractionsRH

H

1,3 diaxial repulsions

Destabilizes axial substituent. Each repulsion is about 7.28/2 kJ = 3.6 kJ

Alternative description:

gauche interactions

Page 30: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Newman Projection of methylcyclohexane

CH3

H

H

H

ring

ring

Axial methyl group Equatorial methyl group

H

CH3

H

H

ring

ring

gauche anti

Page 31: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

0.0 kJ equatorial

7.3 kJ (axial)7.3 kJ (axial)

0.0 kJ equatorial

Disubstituted cyclohexanes1,2 dimethylcyclohexane

3.6 kJ (gauche)

H

CH3

CH3

Hring

ringH3C

H

H

CH3

ring

ring

7.3 + 3.6 = 10.9 kJ 7.3 + 3.6 = 10.9 kJ

interactions

3.6 kJ (gauche)

Page 32: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

CH3

H3C

CH3

CH3

7.3 kJ (axial)0.0 kJ equatorial

0.0 kJ

equato

rial

7.3 kJ (axial)

diequatorial diaxial

H

CH3

H

CH3ring

ringH3C

H

CH3

H

ring

ring

3.6 kJ (gauche)

0.0 kJ + 3.6 kJ = 3.6 kJ 14.6 kJ + 0.0 kJ = 14.6 kJ

Page 33: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

When does the gauche interaction occur?

Page 34: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Translate ring planar structure into 3D

E/A

E/A

E/A

C(CH3)3

A/E

A/E

A/E

C(CH3)3Energy accounting

No axial substituents

One 1,2 gauche interaction between methyl groups, 3.6 kJ/mol

Total: 3.6 kJ

Assume the tert-butyl group is equatorial.

Page 35: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Problem: Which has a higher heat of combustion per mole, A or B?

t-Bu t-Bu

A B

E/A

E/AE/A

E/A

E/A E/A

A/E A/E

3.6 3.6 3.67.3

7.3

7.2 18.2

More repulsion, higher heat of combustion by 11.0 kJ/mol

Page 36: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Trans and Cis Decalin

Trans decalin

Locked, no ring flipping Cis decalin, can ring flip

decahydronaphthalenedecalinbicyclo [4.4.0] decane

Build trans decalin starting from cyclohexane, one linkage up, one down

Now build cis decalin, both same side.

Trans sites used on the left ringTrans sites used on the right ring Cis sites used on left ring.

Cis sites used on right ring.

Page 37: Alkanes Acyclic: C n H 2n+2 Cyclic (one ring): C n H 2n Bicyclic (two rings) : C n H 2n-2 Only single bonds, sp 3 hybridization, close to tetrahedral bond.

Trans fusions determine geometry

H

H

H3C

HO

What is the geometry of the OH and CH3?

Trans fusions, rings must use equatorial position for fusion. Rings are locked.

The H’s must both be axial

Work out axial / equatorial for the OH and CH3.

A/EA/E

A/E

E/A

E/A E/A

OH is equatorial and CH3 is axial