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Network Science Class 6: Evolving Networks Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and Louis Shekhtman www.BarabasiLab.com
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Jun 18, 2021

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Page 1: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Network Science

Class 6: Evolving Networks

Albert-László BarabásiWith

Emma K. Towlson, Sebastian Ruf, Michael Danziger, and Louis Shekhtman

www.BarabasiLab.com

Page 2: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

1. Bianconi-Barabasi Model2. Bose-Einstein Condensation3. Initial attractiveness4. Role of internal links.5. Node deletion.6. Accelerated growth.

Questions

Page 3: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Introduction

Section 1

Page 4: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 1

Page 5: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

The BA model is only a minimal model.

Makes the simplest assumptions:

• linear growth

• linear preferential attachment

Does not capture variations in the shape of the degree distribution

variations in the degree exponentthe size-independent clustering coefficient

Hypothesis: The BA model can be adapted to describe most features of real networks.

We need to incorporate mechanisms that are known to take place in real networks: addition of links without new nodes, link rewiring, link removal; node removal, constraints or optimization

Network Science: Evolving Network Models

EVOLVING NETWORK MODELS

m2k

ii kk )(

Page 6: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Bianconi-Barabasi model

Section 6.2

Page 7: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

SF model: k(t)~t ½ (first mover advantage)

Fitness model: fitness (η ) k(η,t)~tβ(η)

( )β η =η/C

Can Latecomers Make It?

time

Deg

ree

(k)

Bianconi & Barabási, Physical Review Letters 2001; Europhys. Lett. 2001.

(ki) @hi ki

h j k jjå

Page 8: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 6.2 Bianconi-Barabasi Model (definition)

4EVOLVING NETWORKS

THE BIANCONI-BARABÁSIMODEL

SECTION 6.2

Some people have a knack for turning each random encounter into a

lasting social link; some companies turn each consumer into a loyal part-

ner; some webpages turn visitors into addicts. A common feature of these

successful nodes is some intrinsic property that propels them ahead of the

pack. We will call this property fitn ess .

Fitness is an individual’s gift to turn a random encounter into a last-

ing friendship; it is a company’s knack to acquire consumers relative to

its competition; it is a webpage’s ability to bring us back on a daily basis

despite the many other pages that compete for our attention. Fitness may

have genetic roots in people, it may be related to innovativeness and man-

agement quality in companies and may depend on the content off ered by

a website.

In the Barabási-Albert model we assumed that a node’s growth rate is

determined solely by its degree. To incorporate the role of fi tness we as-

sume that preferential attachment is driven by the product of a node’s fi t-

ness, , and its degree k. The resulting model, called the Bian con i-Barabási

or the fitn ess m odel, consists of the following two steps [2, 3]:

• Growth

In each timestep a new node j with m links and fi tness j is added to

the network, where j is a random number chosen from a fitn ess dis-

tribu tion . Once assigned, a node’s fi tness does not change.

• Preferential Attachment The probability that a link of a new node connects to node i is propor-

tional to the product of node i’s degree ki and its fi tness

i,

In (6.1) the dependence of i on k

i captures the fact that higher-de-

gree nodes have more visibility, hence we are more likely to link to them.

EVOLVING NETWORKS

The movie shows a growing network in which each new node acquires a randomly chosen fit-ness parameter at birth, indicated by the color of the node. Each new node chooses the nodes it links to following generalized preferential attachment (6.1), making a node’s growth rate proportional to its fitness. The node size is pro-portional to its degree, illustrating that with time the nodes with the highest fitness turn into the largest hubs. Video cou rtesy of Dashu n W an g.

Online Resource 6.1The Bianconi-Barabási Model

(6.1)k

ki

i i

j

j jåhh

.

>

Page 9: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 2 Fitness Model

Page 10: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 6.2 Bianconi-Barabasi Model (Analytical)

5EVOLVING NETWORKS

The dependence of i on

i implies that between two nodes with the same

degree, the one with higher fi tness is selected with a higher probability.

Hence, (6.1) assures that even a relatively young node, with initially only a

few links, can acquire links rapidly if it has larger fi tness than the rest of

the nodes.

DEGREE DYNAMICSWe can use the continuum theory to predict each node’s temporal evo-

lution. According to (6.1), the degree of node i changes at the rate

Let us assume that the time evolution of ki follows a power law with a

fi tness-dependent exponent (i ) (Figure 6.2),

Inserting (6.3) into (6.2) we find that the dy n am ic expon en t satisfies (AD-VANCED TOPICS 6.A)

with

In the Barabási-Albert model we have = 1/2, hence the degree of each

node increases as a square root of time. According to (6.4), in the Bian-

coni-Barabási model the dynamic exponent is proportional to the node’s

fitness, , hence each node has its own dynamic exponent. Consequently,

a node with a higher fitness will increase its degree faster. Given suffi -

cient time, the fitter node will leave behind nodes with a smaller fitness

(Figure 6.2). Facebook is a poster child of this phenomenon: a latecomer

(a) In the Barabási-Albert model all nodes in-crease their degree at the same rate, hence the earlier a node joins the network, the larger is its degree at any time. The figure shows the time dependent degree of nodes that arrived at diff erent times (t

i = 1,000, 3000, 5000),

demonstrating that the later nodes are unable to pass the earlier nodes [4, 5].

(b) Same as in (a) but in a log-log plot, demon-strating that each node follows the same growth law (5.7) with identical dynamical ex-ponents = 1/2.

(c) In the Bianconi-Barabási model nodes in-crease their degree at a rate that is determined by their individual fi tness. Hence a latecomer node with a higher fitness (purple symbols) can overcome the earlier nodes.

(d) Same as in (c) but on a log-log plot, demon-strating that each node increases its degree following a power law with its own fitness-de-pendent dynamical exponent , as predicted by (6.3) and (6.4).

In (a)-(d) each curve corresponds to average over independent runs using the same fitness sequence.

Figure 6.2Competition in the Bianconi-Barabási Model

(a)

(c)

(b)

(d)

(6.4)C

( )b h h

EVOLVING NETWORKS THE BIANCONI-BARABÁSI MODEL

(6.3).ki(t,ti ) m

t

ti

( i )

(6.5)C d( )1 ( )

ò r h hb h

h-

.

(6.2)ki

t m iki

kjk j

.

2000 4000 6000 8000 1000001 1

2

3

45678910

2

3

1.5

2.5

5000 10000 50000 1000001000t

k(t)

2000 4000 6000 8000 1000001

2

3

1.5

2.5

t

k(t)

LINEAR PLOT

BARA

BÁSI

-ALB

ERT

MOD

ELBI

ANCO

NI-B

ARAB

ÁSI

MOD

EL

LOG-LOG PLOT

k(t)

t

1

2

3

45678910

5000 10000 50000 1000001000

k(t)

t

= 0.223

= 0.185 = 0.991

5EVOLVING NETWORKS

The dependence of i on

i implies that between two nodes with the same

degree, the one with higher fi tness is selected with a higher probability.

Hence, (6.1) assures that even a relatively young node, with initially only a

few links, can acquire links rapidly if it has larger fi tness than the rest of

the nodes.

DEGREE DYNAMICSWe can use the continuum theory to predict each node’s temporal evo-

lution. According to (6.1), the degree of node i changes at the rate

Let us assume that the time evolution of ki follows a power law with a

fi tness-dependent exponent (i ) (Figure 6.2),

Inserting (6.3) into (6.2) we find that the dy n am ic expon en t satisfies (AD-VANCED TOPICS 6.A)

with

In the Barabási-Albert model we have = 1/2, hence the degree of each

node increases as a square root of time. According to (6.4), in the Bian-

coni-Barabási model the dynamic exponent is proportional to the node’s

fitness, , hence each node has its own dynamic exponent. Consequently,

a node with a higher fitness will increase its degree faster. Given suffi -

cient time, the fitter node will leave behind nodes with a smaller fitness

(Figure 6.2). Facebook is a poster child of this phenomenon: a latecomer

(a) In the Barabási-Albert model all nodes in-crease their degree at the same rate, hence the earlier a node joins the network, the larger is its degree at any time. The figure shows the time dependent degree of nodes that arrived at diff erent times (t

i = 1,000, 3000, 5000),

demonstrating that the later nodes are unable to pass the earlier nodes [4, 5].

(b) Same as in (a) but in a log-log plot, demon-strating that each node follows the same growth law (5.7) with identical dynamical ex-ponents = 1/2.

(c) In the Bianconi-Barabási model nodes in-crease their degree at a rate that is determined by their individual fitness. Hence a latecomer node with a higher fitness (purple symbols) can overcome the earlier nodes.

(d) Same as in (c) but on a log-log plot, demon-strating that each node increases its degree following a power law with its own fitness-de-pendent dynamical exponent , as predicted by (6.3) and (6.4).

In (a)-(d) each curve corresponds to average over independent runs using the same fitness sequence.

Figure 6.2Competition in the Bianconi-Barabási Model

(a)

(c)

(b)

(d)

(6.4)C

( )b h h

EVOLVING NETWORKS THE BIANCONI-BARABÁSI MODEL

(6.3).ki(t,ti ) m

t

ti

( i )

(6.5)C d( )1 ( )

ò r h hb h

h-

.

(6.2)ki

t m iki

kjk j

.

2000 4000 6000 8000 1000001 1

2

3

45678910

2

3

1.5

2.5

5000 10000 50000 1000001000t

k(t)

2000 4000 6000 8000 1000001

2

3

1.5

2.5

t

k(t)

LINEAR PLOT

BARA

BÁSI

-ALB

ERT

MOD

ELBI

ANCO

NI-B

ARAB

ÁSI

MOD

EL

LOG-LOG PLOT

k(t)

t

1

2

3

45678910

5000 10000 50000 1000001000

k(t)

t

= 0.223

= 0.185 = 0.991

Page 11: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 6.2 Bianconi-Barabasi Model (Analytical)

5EVOLVING NETWORKS

The dependence of i on

i implies that between two nodes with the same

degree, the one with higher fi tness is selected with a higher probability.

Hence, (6.1) assures that even a relatively young node, with initially only a

few links, can acquire links rapidly if it has larger fi tness than the rest of

the nodes.

DEGREE DYNAMICSWe can use the continuum theory to predict each node’s temporal evo-

lution. According to (6.1), the degree of node i changes at the rate

Let us assume that the time evolution of ki follows a power law with a

fi tness-dependent exponent (i ) (Figure 6.2),

Inserting (6.3) into (6.2) we find that the dy n am ic expon en t satisfies (AD-VANCED TOPICS 6.A)

with

In the Barabási-Albert model we have = 1/2, hence the degree of each

node increases as a square root of time. According to (6.4), in the Bian-

coni-Barabási model the dynamic exponent is proportional to the node’s

fitness, , hence each node has its own dynamic exponent. Consequently,

a node with a higher fitness will increase its degree faster. Given suffi -

cient time, the fitter node will leave behind nodes with a smaller fitness

(Figure 6.2). Facebook is a poster child of this phenomenon: a latecomer

(a) In the Barabási-Albert model all nodes in-crease their degree at the same rate, hence the earlier a node joins the network, the larger is its degree at any time. The figure shows the time dependent degree of nodes that arrived at diff erent times (t

i = 1,000, 3000, 5000),

demonstrating that the later nodes are unable to pass the earlier nodes [4, 5].

(b) Same as in (a) but in a log-log plot, demon-strating that each node follows the same growth law (5.7) with identical dynamical ex-ponents = 1/2.

(c) In the Bianconi-Barabási model nodes in-crease their degree at a rate that is determined by their individual fi tness. Hence a latecomer node with a higher fitness (purple symbols) can overcome the earlier nodes.

(d) Same as in (c) but on a log-log plot, demon-strating that each node increases its degree following a power law with its own fitness-de-pendent dynamical exponent , as predicted by (6.3) and (6.4).

In (a)-(d) each curve corresponds to average over independent runs using the same fitness sequence.

Figure 6.2Competition in the Bianconi-Barabási Model

(a)

(c)

(b)

(d)

(6.4)C

( )b h h

EVOLVING NETWORKS THE BIANCONI-BARABÁSI MODEL

(6.3).ki(t,ti ) m

t

ti

( i )

(6.5)C d( )1 ( )

ò r h hb h

h-

.

(6.2)ki

t m iki

kjk j

.

2000 4000 6000 8000 1000001 1

2

3

45678910

2

3

1.5

2.5

5000 10000 50000 1000001000t

k(t)

2000 4000 6000 8000 1000001

2

3

1.5

2.5

t

k(t)

LINEAR PLOT

BARA

BÁSI

-ALB

ERT

MOD

ELBI

ANCO

NI-B

ARAB

ÁSI

MOD

EL

LOG-LOG PLOT

k(t)

t

1

2

3

45678910

5000 10000 50000 1000001000

k(t)

t

= 0.223

= 0.185 = 0.991

5EVOLVING NETWORKS

The dependence of i on

i implies that between two nodes with the same

degree, the one with higher fi tness is selected with a higher probability.

Hence, (6.1) assures that even a relatively young node, with initially only a

few links, can acquire links rapidly if it has larger fi tness than the rest of

the nodes.

DEGREE DYNAMICSWe can use the continuum theory to predict each node’s temporal evo-

lution. According to (6.1), the degree of node i changes at the rate

Let us assume that the time evolution of ki follows a power law with a

fi tness-dependent exponent (i ) (Figure 6.2),

Inserting (6.3) into (6.2) we find that the dyn am ic expon en t satisfies (AD-VANCED TOPICS 6.A)

with

In the Barabási-Albert model we have = 1/2, hence the degree of each

node increases as a square root of time. According to (6.4), in the Bian-

coni-Barabási model the dynamic exponent is proportional to the node’s

fitness, , hence each node has its own dynamic exponent. Consequently,

a node with a higher fitness will increase its degree faster. Given suffi -

cient time, the fitter node will leave behind nodes with a smaller fitness

(Figure 6.2). Facebook is a poster child of this phenomenon: a latecomer

(a) In the Barabási-Albert model all nodes in-crease their degree at the same rate, hence the earlier a node joins the network, the larger is its degree at any time. The figure shows the time dependent degree of nodes that arrived at diff erent times (t

i = 1,000, 3000, 5000),

demonstrating that the later nodes are unable to pass the earlier nodes [4, 5].

(b) Same as in (a) but in a log-log plot, demon-strating that each node follows the same growth law (5.7) with identical dynamical ex-ponents = 1/2.

(c) In the Bianconi-Barabási model nodes in-crease their degree at a rate that is determined by their individual fitness. Hence a latecomer node with a higher fitness (purple symbols) can overcome the earlier nodes.

(d) Same as in (c) but on a log-log plot, demon-strating that each node increases its degree following a power law with its own fitness-de-pendent dynamical exponent , as predicted by (6.3) and (6.4).

In (a)-(d) each curve corresponds to average over independent runs using the same fitness sequence.

Figure 6.2Competition in the Bianconi-Barabási Model

(a)

(c)

(b)

(d)

(6.4)C

( )b h h

EVOLVING NETWORKS THE BIANCONI-BARABÁSI MODEL

(6.3).ki(t,ti ) m

t

ti

( i )

(6.5)C d( )1 ( )

ò r h hb h

h-

.

(6.2)ki

t m iki

kjk j

.

2000 4000 6000 8000 1000001 1

2

3

45678910

2

3

1.5

2.5

5000 10000 50000 1000001000t

k(t)

2000 4000 6000 8000 1000001

2

3

1.5

2.5

t

k(t)

LINEAR PLOT

BARA

BÁSI

-ALB

ERT

MOD

ELBI

ANCO

NI-B

ARAB

ÁSI

MOD

EL

LOG-LOG PLOT

k(t)

t

1

2

3

45678910

5000 10000 50000 1000001000

k(t)

t

= 0.223

= 0.185 = 0.991

Cmt=

C⩽2ηmax

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Section 2 Fitness Model

BA model: k(t)~t ½

(first mover advantage)

BB model: k(η,t)~tβ(η)

(fit-gets-richer)

( )β η =η/C

Page 13: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 2 Fitness Model-Degree distribution

Uniform fitness distribution: fitness uniformly distributed in the [0,1] interval.

C* = 1.255

pk∼C∫dηρ (η)η (m

k )C

η+1

Page 14: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 6.2 Bianconi-Barabasi Model (Analytical)

5EVOLVING NETWORKS

The dependence of i on

i implies that between two nodes with the same

degree, the one with higher fi tness is selected with a higher probability.

Hence, (6.1) assures that even a relatively young node, with initially only a

few links, can acquire links rapidly if it has larger fi tness than the rest of

the nodes.

DEGREE DYNAMICSWe can use the continuum theory to predict each node’s temporal evo-

lution. According to (6.1), the degree of node i changes at the rate

Let us assume that the time evolution of ki follows a power law with a

fi tness-dependent exponent (i ) (Figure 6.2),

Inserting (6.3) into (6.2) we find that the dy n am ic expon en t satisfies (AD-VANCED TOPICS 6.A)

with

In the Barabási-Albert model we have = 1/2, hence the degree of each

node increases as a square root of time. According to (6.4), in the Bian-

coni-Barabási model the dynamic exponent is proportional to the node’s

fitness, , hence each node has its own dynamic exponent. Consequently,

a node with a higher fitness will increase its degree faster. Given suffi -

cient time, the fitter node will leave behind nodes with a smaller fitness

(Figure 6.2). Facebook is a poster child of this phenomenon: a latecomer

(a) In the Barabási-Albert model all nodes in-crease their degree at the same rate, hence the earlier a node joins the network, the larger is its degree at any time. The figure shows the time dependent degree of nodes that arrived at diff erent times (t

i = 1,000, 3000, 5000),

demonstrating that the later nodes are unable to pass the earlier nodes [4, 5].

(b) Same as in (a) but in a log-log plot, demon-strating that each node follows the same growth law (5.7) with identical dynamical ex-ponents = 1/2.

(c) In the Bianconi-Barabási model nodes in-crease their degree at a rate that is determined by their individual fitness. Hence a latecomer node with a higher fitness (purple symbols) can overcome the earlier nodes.

(d) Same as in (c) but on a log-log plot, demon-strating that each node increases its degree following a power law with its own fitness-de-pendent dynamical exponent , as predicted by (6.3) and (6.4).

In (a)-(d) each curve corresponds to average over independent runs using the same fitness sequence.

Figure 6.2Competition in the Bianconi-Barabási Model

(a)

(c)

(b)

(d)

(6.4)C

( )b h h

EVOLVING NETWORKS THE BIANCONI-BARABÁSI MODEL

(6.3).ki(t,ti ) m

t

ti

( i )

(6.5)C d( )1 ( )

ò r h hb h

h-

.

(6.2)ki

t m iki

kjk j

.

2000 4000 6000 8000 1000001 1

2

3

45678910

2

3

1.5

2.5

5000 10000 50000 1000001000t

k(t)

2000 4000 6000 8000 1000001

2

3

1.5

2.5

t

k(t)

LINEAR PLOT

BARA

BÁSI

-ALB

ERT

MOD

ELBI

ANCO

NI-B

ARAB

ÁSI

MOD

EL

LOG-LOG PLOT

k(t)

t

1

2

3

45678910

5000 10000 50000 1000001000

k(t)

t

= 0.223

= 0.185 = 0.991

pk∼C∫dηρ (η)η (m

k )C

η+1

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Section 6.2 Same Fitness

pk∼C∫dηρ (η)η (m

k )C

η+1

Page 16: Albert-László Barabásimeidanis/courses/mo412/2020s1/... · 2020. 5. 7. · Albert-László Barabási With Emma K. Towlson, Sebastian Ruf, Michael Danziger, and ... In the Barabási-Albert

Section 6.2 Uniform Fitnesses

pk∼C∫dηρ (η)η (m

k )C

η+1

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Section 6.2 Uniform Fitnesses

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Measuring Fitness

Section 6.3

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Section 6.3 Measuring Fitness: Web documents

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Section 3 The Fitness of a scientific publication

Φ(x)= 1

√2π ∫−∞

x

e− y2 /2dy

k i(t )=m(e

β η i

AΦ( ln (t )−μ i

σ i)−1)

Πi∼η i k i Pi(t)

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Section 3 The Fitness of a scientific publication

Ultimate Impact: t ∞

Φ(x)= 1

√2π ∫−∞

x

e− y2 /2dy

k i(∞)=m(eβη i

A −1)

k i(t )=m(e

β η i

AΦ( ln (t )−μ i

σ i)−1)