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AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

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Page 1: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

1

Page 2: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

OUTLINE› C onstra ints to meet a high seed qua lity during seed

production

› Multispectra l ima ging

› Seed hea lth

› Purity

› G ermina tion

Page 3: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

ADVERSE CONDITIONS

Summer 2010 and 2011 in Denmark

Page 4: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

ACTIVITIES BEGAN IN 1997

Distinguish betweenPoa pratensis/ Poa annua?

Identify spores of fungal pathogens?

Page 5: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

WHAT TO BE MEASURED?› Colour (or Gray level)› Topographical texture› Spectral texture› Gloss› Shape› Size› Position and orientation› Count

Page 6: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

WHY USE IMAGING?› Mimic human vision› Eliminate subjective assessment› Non-homogeneous samples› Focusing on certain areas of a sample› When the shape, size and texture of the object is of special

interest› Documentation

Page 7: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

TRADITIONAL COLOUR IMAGEUses 3 broadbandfilters for Red, Greenand Blue

RGB Image

Page 8: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

TRADITIONAL COLOUR IMAGING

B low G high R low

Chlorophyll a and b give almost the same RGB signals

Page 9: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

MULTISPECTRAL IMAGING

200 300 400 600500 700 800 900 1000

near-infrared

(NIR)

ultraviolet

(UV)nm

Page 10: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

BY SPECIFIC WAVELENGTHS CHLOROPHYLL A AND B CAN BE DISTINGUISHED

Page 11: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

VIDEOMETER SPECTRAL IMAGING

• LEDs: Stable, durable, large selection, rapidly developing technology

• Up to 20 different high-resolution bands acquired sequentially in 0.5-1.5 seconds depending on camera

• May be combined with emission filters and backlight

Page 12: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

SPINACH SEED QUALITY

Page 13: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

SEED HEALTHSix groups of 3 seeds (un-infected control, Fusarium, Verticilium, Alternaria, Stemphylium, Cladosporium) analysed in visual and near infrared light.

NIR 870nmVIS 450nm

Page 14: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

SEED HEALTH

Fusa rium C la dosporium VerticilliumAlterna riaStemphylium

395 430 450 470 505 565 590 630 645 660 700 850 870 890 910 920 940 950 9700

20

40

60

80

100

120

140

Wavelength (nm)

Mea

n in

tens

ity

AlternariaCladosporiumFusariumStemphyliumUninfectedVerticillium

Page 15: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

HISTOGRAM OF PIXEL VALUE

Pixel intensity

Alternaria spp. Fusarium spp. Stemphylium spp.Cladosporium spp. Verticillium spp. Uninfected

Num

bero

f pix

els 450nm 870nm

Seed Science and TechnologyOlesen et al., 2011

Page 16: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

INSTRUMENT FOR LARG E-SC ALE MULTISPEC TRAL IMAG ING

VIDEOMETERLAB XY› VideometerLab Sphere with

Multispectral light

› XY positioning system

› Presentation plate for samples

› Vibration Device for even distribution of samples

› Vacuum system for automatic removal of samples

Page 17: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

SEED QUALITY, GRASSESFestuca rubra, L.

L: 6.2; W: 1.0; H: 0.8Vulpia bromoides

L: 6.3; W: 0.7; H: 0.6

Page 18: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

REPORT:

SEED LENGTH

Vulpia

Festuca rubra

Page 19: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

GERMINATION PROCESSDetection of chitting-germina tion process in ma lting ba rley.

G ra ins without a ny germ will be ma rked in a red recta ngle a nd gra ins with germ will be ma rkedwith a green recta ngle

Perspective:Automa ted single count of ra dicle emergence topredict seed a nd seedling vigour?(,Seed Testing Interna tiona l, Ma tthews a nd Powell, 2011) the output

Page 20: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

FUTURE OUTLOOK› Multispectral cameras and imaging hold a potential for

measuring seed quality parameters› Can new methods based on multispectral imaging be

accepted in the ISTA rules?

Page 21: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

SPECTRASEED› Newly gra nted project with

the a im to develop multispectra l technology for fa st, cost-efficient, a nd non-destructive a na lysis of seed qua lity

› Participants: › University, technology

provider (Videometer) and the Danish seed industry and seed processors.

Page 22: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

SPECTRASEED› W ork with commercia l seed lots› Build models ba sed on results a nd input from tra ined seed

a na lysts a nd spectromorphologica l informa tion for seed hea lth a nd germina tion

› Test a nd document the a ccura cy

› Implementa tion ba rriers:› Looking a t seeds from only one side / test of more seeds› Seed weight / a rea , optica lly estima ted volume or weight

Page 23: AARHUS UNIVERSITY BIRTE BOELT ISTA 2012 · Summer 2010 and 2011 in Denmark. BIRTE BOELT ISTA 2012 AARHUS UNIVERSITY ACTIVITIES BEGAN IN 1997 ... • Up to 20 different high -resolution

BIRTE BOELT ISTA 2012AARHUSUNIVERSITY

THANK YOU FOR YOUR ATTENTION

AARHUSUNIVERSITY

Acknowledgements to: Jens Michael Carstensen, Videometer A/ SMerete Halkjær Olesen, René Gislum, Lise Deleuran, Johannes Ravn Jørgensen and Svend Tveden-Nyborg, Aarhus University