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` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE PATIENTS.
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` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Mar 31, 2015

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Trinity Beaman
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Page 1: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

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COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE PATIENTS.

Page 2: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

TB- HIV CO-INFECTION

Prevalence of pulmonary TB in HIV positive patients in India

10-15 percent in patients without respiratory symptoms

20-30 percent in patients with respiratory symptoms (1)

HIV patient has 50 % lifetime risk of developing tuberculosis as compared to 10 percent in HIV negative person in India (1)

1. The situation of HIV/M.Tuberculosis Co-infection in India. P.Seth.The open Infectious Disease Journal .2011;5:51-59

Page 3: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Performance of Sputum Microscopy in HIV patients

• Poor sensitivity (35%-50 %) of sputum microscopy in HIV patients due to lesser number of cavities. (1)

• Need for alternative measures :

Rule based tests

NAAT

Culture

1. Diagnosis and treatment of TB in HIV patients. C.Padmapriyadrshini et al. IJMR.201;130:850-65

Page 4: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Detection of pulmonary tuberculosis in HIV patients

• WHO : CBNAAT• RNTCP : Sputum Microscopy

Page 5: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Performance of CBNAAT in HIV patients

CBNAAT : Real-time PCR assay , cartridge based ,no processing needed, sensitive as well as specific

Page 6: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Evidence for CBNAAT in HIV patients

Page 7: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Aims and objectives

To find out comparative accuracy of CBNAAT and sputum microscopy in HIV positive patients

To find out prevalence of Rifampicin Ressistance in HIV positive patients

Meta-analysis of CBNAAT in HIV patients incorporating our data and new studies missed by cochrane review.

Page 8: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Methodology

. We assessed HIV positive adults referred to with pulmonary symptoms suggestive of tuberculosis

. two sputum samples for microscopy using ZN stain ,one sputum sample for CBNAAT and one sputum sample for BACTEC based culture in each patient

Page 9: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Methodology

. Using BACTEC culture positive as gold standard, we determined comparative sensitivity, specificity,Positive Predictive Value, Negative Predictive value, Positive Likelihood Ratio and Negative Likelihood Ratio of CBNAAT and sputum microscopy using SPSS 15.0 software .

. We also did a meta-analysis combining various studies across the world with our study to determine pooled test performance of CBNAAT using MetaDisc 1.4 software.

Page 10: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Results :Sputum microscopy

. Out of 100 screened patients ,90 included with adequate sputum volume, 33 were culture positive and 57 were culture negative

Page 11: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Results :sputum microscopy

Page 12: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Results :CBNAAT

Page 13: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Results :CBNAAT

• CBNAAT picked up 14 extra cases missed by Sputum microscopy. 2/29 patients were Rifampicin ressistant

Page 14: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Comparative Accuracy :ROC curves

Page 15: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Comparative Accuracy :ROC curves

Page 16: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Meta-analysis of Evidence

Page 17: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Meta-analysis of Evidence

Page 18: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Meta-analysis of Evidence

Page 19: ` COMPARATIVE ACCURACY OF CARTRIDGE BASED NUCLEIC ACID AMPLIFICATION TEST AND SPUTUM MICROSCOPY FOR DIAGNOSIS OF PULMONARY TUBERCULOSIS IN HIV POSITIVE.

Conclusion

• CBNAAT performs better than sputum microscopy in diagnosis of pulmonary tuberculosis in HIV patient

• CBNAAT can tell about Rifampicin Ressistance Quickly• CBNAAT has proved superior to sputum microscopy in

cochrane review and meta-analysis done by us• CBNAAT is recommended as first line modality for diagnosis of

tuberculosis in HIV patients and re-treatment cases.• CBNAAT is an add-on in diagnosis of pulmonary tb in HIV

negative smear negative cases with suspicion of kochs chest

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Case : Utility of negative CBNAAT

• A 40 year old HIV positive male presents with cough for two weeks , sputum AFB – 1+, CBNAAT negative

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Case : Utility of negative CBNAAT

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Case : Utility of negative CBNAAT

• Diagnosis : Atypical Mycobacterial infection.