Nutrients, their cycling, and upwelling · Nutrients, their cycling, and upwelling • Nitrogen cycling – Living is easy when there is upwelling – But when the going gets tough…

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Nutrients their cycling and upwelling

bull Nitrogen cyclingndash Living is easy when there is upwelling ndash But when the going gets toughhellip cycle

bull Silica is THE upwelling nutrient ndash Has a deep ocean cycle

Taking the story from the oligotrophic to eutrophic systems

Biolimiting constituents (aka nutrients)

Nitrate (NO3-) Does not limit growth of bluegreen algae

(cyanobacteria) they fix nitrogenSilicate (H2SiO4) Limits the growth of diatoms

Phosphate (HPO4=) the ultimate limiting nutrient for plant growth

Vertical distribution of nutrients

Libes 1992

nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

nutrients become fully depleted during stratification

Nutrient distribution varies among oceans

bullMixed layer is deeper in Atlantic than in PacificbullRemineralized nutrients accumulate in deep water transported by ocean conveyer belt

Light and nutrients

determine where the productivity

is

Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip

PhytoplanktonZooplankton

NutrientsR

elat

ive

incr

ease

Mixing MixingStratified

Light Temperature

Spring bloom

Fall mini-bloom

Productivity follows the nutrient availability

Oligotrophic ocean

bull The nutrient point of view

bull The underlying chemistrybull The controlling chemistry

New versus regenerated production

Lalli and Parsons

Note the biggest arrow is upwelled NO3

Cycling of nitrogen in the ocean

Uptake and use is the dominant parthellip

Biopump of nitrogen in the ocean

Nitrogen limitation and low oxygen

bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

The simple Nitrogen cycle

+V

+III -III

0

-III

Different oxidation states of nitrogen

Libes 1992

The Nitrogen cycle- reality

+V

+III -III

0

-III

PhytoplanktonZooplankton

NutrientsR

elat

ive

incr

ease

Mixing MixingStratified

Light Temperature

Spring bloom

Fall mini-bloom

Annual Stratification sequence

Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

The Nitrogen cyclehellip when nutrients are low the saviors come along

Energy intensive

+V

+III -III

0

-III

Cycling of nitrogen in the ocean

Uptake and use is the dominant parthellip

The Nitrogen cyclehellip when things get tough

Anaerobic Energy intensiveThe spoilers The saviors

You see the other half of the cycle

Low oxygen and the

ldquospoilersrdquo ΣCO2

The Nitrogen cyclehellip the spoilers

Anaerobic respiration

+V

+III -III

0

-III

Lost to the system

The Nitrogen cyclehellip the whole story

Anaerobic respiration

Energy intensive

+V

+III -III

0

-III

Lost to the system Input to the

system

Input to the system

The Marine nitrogen cycleAerobic versus anaerobic

The Eutrophic ocean

bull In the open ocean upwelling is the eutrophicendmember

bull The ecosystem is different and so is the controlling nutrient

Vertical distribution of nutrients

Libes 1992

nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

nutrients become fully depleted during stratification

Hydrocast gear

Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

Deploying the CTD

CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

Rigging the bottles

Water sampling

Drawing samples from the bottles

Processing the samples

Silica the upwelling nutrient

Silicate (H2SiO4) Limits the growth of diatoms

SiO2 (Silica) is an important nutrient only for diatoms

Siliceous plankton make siliceous oozesDiatoms

Shells are composed of silicon (Si)- (glass)

Form silica deposits on ocean floor (siliceous ooze)radiolaria

silicoflagellates

Vertical distribution of nutrients

Libes 1992

nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

The silica cycle (global view)

Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

Biological fixation and bio-pump sinking

Siliceous sediments

Upwelling of silica rich water

Enhanced Diatom growth

( Siliceous based productivity)

River input

The biological pumphellip Not only controls carbon but the nutrients including silica

Silica Siliceous sediments

The conveyor belt circulation

And thermohaline circulation moves through the systemhellip

Horizontal distribution of Silicate

We see a dramatic difference in distribution between the Atlantic and the Pacific

Emerson and Hedges (2008)

Silica the upwelling nutrient

Silicate (H2SiO4) Limits the growth of diatoms

SiO2 (Silica) is an important nutrient only for diatoms

Upwelling zones are areas with high diatom productivity because silica is plentiful

This is because silica from deep water is upwelled there

Coastal Upwelling zones in the world ocean

Mann and Lazire

Open ocean zones of upwelling hellip

Mann and Lazire

Distribution of siliceous sediments

Distribution of siliceous sediments largely aligns with upwelling zones

Silica cycling in an upwelling zone

Dissolved silica is present in deep waters

Silica is fixed in the mixed layer

Silica upwells

1

2

34Diatoms die and the

silica tests sink to the sediments while dissolving and may begin to release SiO2

5 Silica dissolves in the sediments releasing SiO2 to the overlying water

This replenishes the SiO2 content of the water locally and can enhance its silica content

Silica cycling in a coastal upwelling zone

Dissolved silica is present in deep waters

Silica is fixed in the mixed layer

Silica upwells

1

2

34

Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

5 Silica dissolves in the sediments releasing SiO2 to the overlying water

This replenishes the SiO2 content of the water and can enhance its silica content

Siliceous phyto planktonDiatoms radiolarians silicoflagellates

Diatoms - plants

Cell walls are composed of silicon (Si)- essentially glass

Fixed this lecture

bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

goes logically through global and then to local coastal upwelling rather than back and forth

  • Nutrients their cycling and upwelling
  • Biolimiting constituents (aka nutrients)
  • Vertical distribution of nutrients
  • Slide Number 4
  • Light and nutrients determine where the productivity is
  • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
  • Productivity follows the nutrient availability
  • Oligotrophic ocean
  • New versus regenerated production
  • Cycling of nitrogen in the ocean
  • Nitrogen limitation and low oxygen
  • The simple Nitrogen cycle
  • Different oxidation states of nitrogen
  • The Nitrogen cycle- reality
  • Annual Stratification sequence
  • The Nitrogen cyclehellip when nutrients are low the saviors come along
  • Cycling of nitrogen in the ocean
  • The Nitrogen cyclehellip when things get tough
  • Low oxygen and the ldquospoilersrdquo
  • The Nitrogen cyclehellip the spoilers
  • The Nitrogen cyclehellip the whole story
  • The Marine nitrogen cycle
  • The Eutrophic ocean
  • Vertical distribution of nutrients
  • Hydrocast gear
  • Deploying the CTD
  • Rigging the bottles
  • Water sampling
  • Drawing samples from the bottles
  • Processing the samples
  • Slide Number 31
  • Silica the upwelling nutrient
  • Slide Number 33
  • Vertical distribution of nutrients
  • The silica cycle (global view)
  • The biological pumphellip
  • The conveyor belt circulation
  • Slide Number 38
  • Silica the upwelling nutrient
  • Coastal Upwelling zones in the world ocean
  • Open ocean zones of upwelling hellip
  • Distribution of siliceous sediments
  • Silica cycling in an upwelling zone
  • Silica cycling in a coastal upwelling zone
  • Slide Number 45
  • Slide Number 46
  • Fixed this lecture

    Biolimiting constituents (aka nutrients)

    Nitrate (NO3-) Does not limit growth of bluegreen algae

    (cyanobacteria) they fix nitrogenSilicate (H2SiO4) Limits the growth of diatoms

    Phosphate (HPO4=) the ultimate limiting nutrient for plant growth

    Vertical distribution of nutrients

    Libes 1992

    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

    nutrients become fully depleted during stratification

    Nutrient distribution varies among oceans

    bullMixed layer is deeper in Atlantic than in PacificbullRemineralized nutrients accumulate in deep water transported by ocean conveyer belt

    Light and nutrients

    determine where the productivity

    is

    Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip

    PhytoplanktonZooplankton

    NutrientsR

    elat

    ive

    incr

    ease

    Mixing MixingStratified

    Light Temperature

    Spring bloom

    Fall mini-bloom

    Productivity follows the nutrient availability

    Oligotrophic ocean

    bull The nutrient point of view

    bull The underlying chemistrybull The controlling chemistry

    New versus regenerated production

    Lalli and Parsons

    Note the biggest arrow is upwelled NO3

    Cycling of nitrogen in the ocean

    Uptake and use is the dominant parthellip

    Biopump of nitrogen in the ocean

    Nitrogen limitation and low oxygen

    bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

    The simple Nitrogen cycle

    +V

    +III -III

    0

    -III

    Different oxidation states of nitrogen

    Libes 1992

    The Nitrogen cycle- reality

    +V

    +III -III

    0

    -III

    PhytoplanktonZooplankton

    NutrientsR

    elat

    ive

    incr

    ease

    Mixing MixingStratified

    Light Temperature

    Spring bloom

    Fall mini-bloom

    Annual Stratification sequence

    Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

    The Nitrogen cyclehellip when nutrients are low the saviors come along

    Energy intensive

    +V

    +III -III

    0

    -III

    Cycling of nitrogen in the ocean

    Uptake and use is the dominant parthellip

    The Nitrogen cyclehellip when things get tough

    Anaerobic Energy intensiveThe spoilers The saviors

    You see the other half of the cycle

    Low oxygen and the

    ldquospoilersrdquo ΣCO2

    The Nitrogen cyclehellip the spoilers

    Anaerobic respiration

    +V

    +III -III

    0

    -III

    Lost to the system

    The Nitrogen cyclehellip the whole story

    Anaerobic respiration

    Energy intensive

    +V

    +III -III

    0

    -III

    Lost to the system Input to the

    system

    Input to the system

    The Marine nitrogen cycleAerobic versus anaerobic

    The Eutrophic ocean

    bull In the open ocean upwelling is the eutrophicendmember

    bull The ecosystem is different and so is the controlling nutrient

    Vertical distribution of nutrients

    Libes 1992

    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

    nutrients become fully depleted during stratification

    Hydrocast gear

    Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

    Deploying the CTD

    CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

    CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

    Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

    Rigging the bottles

    Water sampling

    Drawing samples from the bottles

    Processing the samples

    Silica the upwelling nutrient

    Silicate (H2SiO4) Limits the growth of diatoms

    SiO2 (Silica) is an important nutrient only for diatoms

    Siliceous plankton make siliceous oozesDiatoms

    Shells are composed of silicon (Si)- (glass)

    Form silica deposits on ocean floor (siliceous ooze)radiolaria

    silicoflagellates

    Vertical distribution of nutrients

    Libes 1992

    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

    In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

    The silica cycle (global view)

    Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

    Biological fixation and bio-pump sinking

    Siliceous sediments

    Upwelling of silica rich water

    Enhanced Diatom growth

    ( Siliceous based productivity)

    River input

    The biological pumphellip Not only controls carbon but the nutrients including silica

    Silica Siliceous sediments

    The conveyor belt circulation

    And thermohaline circulation moves through the systemhellip

    Horizontal distribution of Silicate

    We see a dramatic difference in distribution between the Atlantic and the Pacific

    Emerson and Hedges (2008)

    Silica the upwelling nutrient

    Silicate (H2SiO4) Limits the growth of diatoms

    SiO2 (Silica) is an important nutrient only for diatoms

    Upwelling zones are areas with high diatom productivity because silica is plentiful

    This is because silica from deep water is upwelled there

    Coastal Upwelling zones in the world ocean

    Mann and Lazire

    Open ocean zones of upwelling hellip

    Mann and Lazire

    Distribution of siliceous sediments

    Distribution of siliceous sediments largely aligns with upwelling zones

    Silica cycling in an upwelling zone

    Dissolved silica is present in deep waters

    Silica is fixed in the mixed layer

    Silica upwells

    1

    2

    34Diatoms die and the

    silica tests sink to the sediments while dissolving and may begin to release SiO2

    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

    This replenishes the SiO2 content of the water locally and can enhance its silica content

    Silica cycling in a coastal upwelling zone

    Dissolved silica is present in deep waters

    Silica is fixed in the mixed layer

    Silica upwells

    1

    2

    34

    Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

    This replenishes the SiO2 content of the water and can enhance its silica content

    Siliceous phyto planktonDiatoms radiolarians silicoflagellates

    Diatoms - plants

    Cell walls are composed of silicon (Si)- essentially glass

    Fixed this lecture

    bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

    goes logically through global and then to local coastal upwelling rather than back and forth

    • Nutrients their cycling and upwelling
    • Biolimiting constituents (aka nutrients)
    • Vertical distribution of nutrients
    • Slide Number 4
    • Light and nutrients determine where the productivity is
    • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
    • Productivity follows the nutrient availability
    • Oligotrophic ocean
    • New versus regenerated production
    • Cycling of nitrogen in the ocean
    • Nitrogen limitation and low oxygen
    • The simple Nitrogen cycle
    • Different oxidation states of nitrogen
    • The Nitrogen cycle- reality
    • Annual Stratification sequence
    • The Nitrogen cyclehellip when nutrients are low the saviors come along
    • Cycling of nitrogen in the ocean
    • The Nitrogen cyclehellip when things get tough
    • Low oxygen and the ldquospoilersrdquo
    • The Nitrogen cyclehellip the spoilers
    • The Nitrogen cyclehellip the whole story
    • The Marine nitrogen cycle
    • The Eutrophic ocean
    • Vertical distribution of nutrients
    • Hydrocast gear
    • Deploying the CTD
    • Rigging the bottles
    • Water sampling
    • Drawing samples from the bottles
    • Processing the samples
    • Slide Number 31
    • Silica the upwelling nutrient
    • Slide Number 33
    • Vertical distribution of nutrients
    • The silica cycle (global view)
    • The biological pumphellip
    • The conveyor belt circulation
    • Slide Number 38
    • Silica the upwelling nutrient
    • Coastal Upwelling zones in the world ocean
    • Open ocean zones of upwelling hellip
    • Distribution of siliceous sediments
    • Silica cycling in an upwelling zone
    • Silica cycling in a coastal upwelling zone
    • Slide Number 45
    • Slide Number 46
    • Fixed this lecture

      Vertical distribution of nutrients

      Libes 1992

      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

      nutrients become fully depleted during stratification

      Nutrient distribution varies among oceans

      bullMixed layer is deeper in Atlantic than in PacificbullRemineralized nutrients accumulate in deep water transported by ocean conveyer belt

      Light and nutrients

      determine where the productivity

      is

      Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip

      PhytoplanktonZooplankton

      NutrientsR

      elat

      ive

      incr

      ease

      Mixing MixingStratified

      Light Temperature

      Spring bloom

      Fall mini-bloom

      Productivity follows the nutrient availability

      Oligotrophic ocean

      bull The nutrient point of view

      bull The underlying chemistrybull The controlling chemistry

      New versus regenerated production

      Lalli and Parsons

      Note the biggest arrow is upwelled NO3

      Cycling of nitrogen in the ocean

      Uptake and use is the dominant parthellip

      Biopump of nitrogen in the ocean

      Nitrogen limitation and low oxygen

      bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

      The simple Nitrogen cycle

      +V

      +III -III

      0

      -III

      Different oxidation states of nitrogen

      Libes 1992

      The Nitrogen cycle- reality

      +V

      +III -III

      0

      -III

      PhytoplanktonZooplankton

      NutrientsR

      elat

      ive

      incr

      ease

      Mixing MixingStratified

      Light Temperature

      Spring bloom

      Fall mini-bloom

      Annual Stratification sequence

      Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

      The Nitrogen cyclehellip when nutrients are low the saviors come along

      Energy intensive

      +V

      +III -III

      0

      -III

      Cycling of nitrogen in the ocean

      Uptake and use is the dominant parthellip

      The Nitrogen cyclehellip when things get tough

      Anaerobic Energy intensiveThe spoilers The saviors

      You see the other half of the cycle

      Low oxygen and the

      ldquospoilersrdquo ΣCO2

      The Nitrogen cyclehellip the spoilers

      Anaerobic respiration

      +V

      +III -III

      0

      -III

      Lost to the system

      The Nitrogen cyclehellip the whole story

      Anaerobic respiration

      Energy intensive

      +V

      +III -III

      0

      -III

      Lost to the system Input to the

      system

      Input to the system

      The Marine nitrogen cycleAerobic versus anaerobic

      The Eutrophic ocean

      bull In the open ocean upwelling is the eutrophicendmember

      bull The ecosystem is different and so is the controlling nutrient

      Vertical distribution of nutrients

      Libes 1992

      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

      nutrients become fully depleted during stratification

      Hydrocast gear

      Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

      Deploying the CTD

      CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

      CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

      Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

      Rigging the bottles

      Water sampling

      Drawing samples from the bottles

      Processing the samples

      Silica the upwelling nutrient

      Silicate (H2SiO4) Limits the growth of diatoms

      SiO2 (Silica) is an important nutrient only for diatoms

      Siliceous plankton make siliceous oozesDiatoms

      Shells are composed of silicon (Si)- (glass)

      Form silica deposits on ocean floor (siliceous ooze)radiolaria

      silicoflagellates

      Vertical distribution of nutrients

      Libes 1992

      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

      In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

      The silica cycle (global view)

      Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

      Biological fixation and bio-pump sinking

      Siliceous sediments

      Upwelling of silica rich water

      Enhanced Diatom growth

      ( Siliceous based productivity)

      River input

      The biological pumphellip Not only controls carbon but the nutrients including silica

      Silica Siliceous sediments

      The conveyor belt circulation

      And thermohaline circulation moves through the systemhellip

      Horizontal distribution of Silicate

      We see a dramatic difference in distribution between the Atlantic and the Pacific

      Emerson and Hedges (2008)

      Silica the upwelling nutrient

      Silicate (H2SiO4) Limits the growth of diatoms

      SiO2 (Silica) is an important nutrient only for diatoms

      Upwelling zones are areas with high diatom productivity because silica is plentiful

      This is because silica from deep water is upwelled there

      Coastal Upwelling zones in the world ocean

      Mann and Lazire

      Open ocean zones of upwelling hellip

      Mann and Lazire

      Distribution of siliceous sediments

      Distribution of siliceous sediments largely aligns with upwelling zones

      Silica cycling in an upwelling zone

      Dissolved silica is present in deep waters

      Silica is fixed in the mixed layer

      Silica upwells

      1

      2

      34Diatoms die and the

      silica tests sink to the sediments while dissolving and may begin to release SiO2

      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

      This replenishes the SiO2 content of the water locally and can enhance its silica content

      Silica cycling in a coastal upwelling zone

      Dissolved silica is present in deep waters

      Silica is fixed in the mixed layer

      Silica upwells

      1

      2

      34

      Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

      This replenishes the SiO2 content of the water and can enhance its silica content

      Siliceous phyto planktonDiatoms radiolarians silicoflagellates

      Diatoms - plants

      Cell walls are composed of silicon (Si)- essentially glass

      Fixed this lecture

      bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

      goes logically through global and then to local coastal upwelling rather than back and forth

      • Nutrients their cycling and upwelling
      • Biolimiting constituents (aka nutrients)
      • Vertical distribution of nutrients
      • Slide Number 4
      • Light and nutrients determine where the productivity is
      • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
      • Productivity follows the nutrient availability
      • Oligotrophic ocean
      • New versus regenerated production
      • Cycling of nitrogen in the ocean
      • Nitrogen limitation and low oxygen
      • The simple Nitrogen cycle
      • Different oxidation states of nitrogen
      • The Nitrogen cycle- reality
      • Annual Stratification sequence
      • The Nitrogen cyclehellip when nutrients are low the saviors come along
      • Cycling of nitrogen in the ocean
      • The Nitrogen cyclehellip when things get tough
      • Low oxygen and the ldquospoilersrdquo
      • The Nitrogen cyclehellip the spoilers
      • The Nitrogen cyclehellip the whole story
      • The Marine nitrogen cycle
      • The Eutrophic ocean
      • Vertical distribution of nutrients
      • Hydrocast gear
      • Deploying the CTD
      • Rigging the bottles
      • Water sampling
      • Drawing samples from the bottles
      • Processing the samples
      • Slide Number 31
      • Silica the upwelling nutrient
      • Slide Number 33
      • Vertical distribution of nutrients
      • The silica cycle (global view)
      • The biological pumphellip
      • The conveyor belt circulation
      • Slide Number 38
      • Silica the upwelling nutrient
      • Coastal Upwelling zones in the world ocean
      • Open ocean zones of upwelling hellip
      • Distribution of siliceous sediments
      • Silica cycling in an upwelling zone
      • Silica cycling in a coastal upwelling zone
      • Slide Number 45
      • Slide Number 46
      • Fixed this lecture

        Nutrient distribution varies among oceans

        bullMixed layer is deeper in Atlantic than in PacificbullRemineralized nutrients accumulate in deep water transported by ocean conveyer belt

        Light and nutrients

        determine where the productivity

        is

        Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip

        PhytoplanktonZooplankton

        NutrientsR

        elat

        ive

        incr

        ease

        Mixing MixingStratified

        Light Temperature

        Spring bloom

        Fall mini-bloom

        Productivity follows the nutrient availability

        Oligotrophic ocean

        bull The nutrient point of view

        bull The underlying chemistrybull The controlling chemistry

        New versus regenerated production

        Lalli and Parsons

        Note the biggest arrow is upwelled NO3

        Cycling of nitrogen in the ocean

        Uptake and use is the dominant parthellip

        Biopump of nitrogen in the ocean

        Nitrogen limitation and low oxygen

        bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

        The simple Nitrogen cycle

        +V

        +III -III

        0

        -III

        Different oxidation states of nitrogen

        Libes 1992

        The Nitrogen cycle- reality

        +V

        +III -III

        0

        -III

        PhytoplanktonZooplankton

        NutrientsR

        elat

        ive

        incr

        ease

        Mixing MixingStratified

        Light Temperature

        Spring bloom

        Fall mini-bloom

        Annual Stratification sequence

        Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

        The Nitrogen cyclehellip when nutrients are low the saviors come along

        Energy intensive

        +V

        +III -III

        0

        -III

        Cycling of nitrogen in the ocean

        Uptake and use is the dominant parthellip

        The Nitrogen cyclehellip when things get tough

        Anaerobic Energy intensiveThe spoilers The saviors

        You see the other half of the cycle

        Low oxygen and the

        ldquospoilersrdquo ΣCO2

        The Nitrogen cyclehellip the spoilers

        Anaerobic respiration

        +V

        +III -III

        0

        -III

        Lost to the system

        The Nitrogen cyclehellip the whole story

        Anaerobic respiration

        Energy intensive

        +V

        +III -III

        0

        -III

        Lost to the system Input to the

        system

        Input to the system

        The Marine nitrogen cycleAerobic versus anaerobic

        The Eutrophic ocean

        bull In the open ocean upwelling is the eutrophicendmember

        bull The ecosystem is different and so is the controlling nutrient

        Vertical distribution of nutrients

        Libes 1992

        nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

        nutrients become fully depleted during stratification

        Hydrocast gear

        Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

        Deploying the CTD

        CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

        CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

        Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

        Rigging the bottles

        Water sampling

        Drawing samples from the bottles

        Processing the samples

        Silica the upwelling nutrient

        Silicate (H2SiO4) Limits the growth of diatoms

        SiO2 (Silica) is an important nutrient only for diatoms

        Siliceous plankton make siliceous oozesDiatoms

        Shells are composed of silicon (Si)- (glass)

        Form silica deposits on ocean floor (siliceous ooze)radiolaria

        silicoflagellates

        Vertical distribution of nutrients

        Libes 1992

        nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

        In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

        The silica cycle (global view)

        Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

        Biological fixation and bio-pump sinking

        Siliceous sediments

        Upwelling of silica rich water

        Enhanced Diatom growth

        ( Siliceous based productivity)

        River input

        The biological pumphellip Not only controls carbon but the nutrients including silica

        Silica Siliceous sediments

        The conveyor belt circulation

        And thermohaline circulation moves through the systemhellip

        Horizontal distribution of Silicate

        We see a dramatic difference in distribution between the Atlantic and the Pacific

        Emerson and Hedges (2008)

        Silica the upwelling nutrient

        Silicate (H2SiO4) Limits the growth of diatoms

        SiO2 (Silica) is an important nutrient only for diatoms

        Upwelling zones are areas with high diatom productivity because silica is plentiful

        This is because silica from deep water is upwelled there

        Coastal Upwelling zones in the world ocean

        Mann and Lazire

        Open ocean zones of upwelling hellip

        Mann and Lazire

        Distribution of siliceous sediments

        Distribution of siliceous sediments largely aligns with upwelling zones

        Silica cycling in an upwelling zone

        Dissolved silica is present in deep waters

        Silica is fixed in the mixed layer

        Silica upwells

        1

        2

        34Diatoms die and the

        silica tests sink to the sediments while dissolving and may begin to release SiO2

        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

        This replenishes the SiO2 content of the water locally and can enhance its silica content

        Silica cycling in a coastal upwelling zone

        Dissolved silica is present in deep waters

        Silica is fixed in the mixed layer

        Silica upwells

        1

        2

        34

        Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

        This replenishes the SiO2 content of the water and can enhance its silica content

        Siliceous phyto planktonDiatoms radiolarians silicoflagellates

        Diatoms - plants

        Cell walls are composed of silicon (Si)- essentially glass

        Fixed this lecture

        bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

        goes logically through global and then to local coastal upwelling rather than back and forth

        • Nutrients their cycling and upwelling
        • Biolimiting constituents (aka nutrients)
        • Vertical distribution of nutrients
        • Slide Number 4
        • Light and nutrients determine where the productivity is
        • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
        • Productivity follows the nutrient availability
        • Oligotrophic ocean
        • New versus regenerated production
        • Cycling of nitrogen in the ocean
        • Nitrogen limitation and low oxygen
        • The simple Nitrogen cycle
        • Different oxidation states of nitrogen
        • The Nitrogen cycle- reality
        • Annual Stratification sequence
        • The Nitrogen cyclehellip when nutrients are low the saviors come along
        • Cycling of nitrogen in the ocean
        • The Nitrogen cyclehellip when things get tough
        • Low oxygen and the ldquospoilersrdquo
        • The Nitrogen cyclehellip the spoilers
        • The Nitrogen cyclehellip the whole story
        • The Marine nitrogen cycle
        • The Eutrophic ocean
        • Vertical distribution of nutrients
        • Hydrocast gear
        • Deploying the CTD
        • Rigging the bottles
        • Water sampling
        • Drawing samples from the bottles
        • Processing the samples
        • Slide Number 31
        • Silica the upwelling nutrient
        • Slide Number 33
        • Vertical distribution of nutrients
        • The silica cycle (global view)
        • The biological pumphellip
        • The conveyor belt circulation
        • Slide Number 38
        • Silica the upwelling nutrient
        • Coastal Upwelling zones in the world ocean
        • Open ocean zones of upwelling hellip
        • Distribution of siliceous sediments
        • Silica cycling in an upwelling zone
        • Silica cycling in a coastal upwelling zone
        • Slide Number 45
        • Slide Number 46
        • Fixed this lecture

          Light and nutrients

          determine where the productivity

          is

          Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip

          PhytoplanktonZooplankton

          NutrientsR

          elat

          ive

          incr

          ease

          Mixing MixingStratified

          Light Temperature

          Spring bloom

          Fall mini-bloom

          Productivity follows the nutrient availability

          Oligotrophic ocean

          bull The nutrient point of view

          bull The underlying chemistrybull The controlling chemistry

          New versus regenerated production

          Lalli and Parsons

          Note the biggest arrow is upwelled NO3

          Cycling of nitrogen in the ocean

          Uptake and use is the dominant parthellip

          Biopump of nitrogen in the ocean

          Nitrogen limitation and low oxygen

          bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

          The simple Nitrogen cycle

          +V

          +III -III

          0

          -III

          Different oxidation states of nitrogen

          Libes 1992

          The Nitrogen cycle- reality

          +V

          +III -III

          0

          -III

          PhytoplanktonZooplankton

          NutrientsR

          elat

          ive

          incr

          ease

          Mixing MixingStratified

          Light Temperature

          Spring bloom

          Fall mini-bloom

          Annual Stratification sequence

          Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

          The Nitrogen cyclehellip when nutrients are low the saviors come along

          Energy intensive

          +V

          +III -III

          0

          -III

          Cycling of nitrogen in the ocean

          Uptake and use is the dominant parthellip

          The Nitrogen cyclehellip when things get tough

          Anaerobic Energy intensiveThe spoilers The saviors

          You see the other half of the cycle

          Low oxygen and the

          ldquospoilersrdquo ΣCO2

          The Nitrogen cyclehellip the spoilers

          Anaerobic respiration

          +V

          +III -III

          0

          -III

          Lost to the system

          The Nitrogen cyclehellip the whole story

          Anaerobic respiration

          Energy intensive

          +V

          +III -III

          0

          -III

          Lost to the system Input to the

          system

          Input to the system

          The Marine nitrogen cycleAerobic versus anaerobic

          The Eutrophic ocean

          bull In the open ocean upwelling is the eutrophicendmember

          bull The ecosystem is different and so is the controlling nutrient

          Vertical distribution of nutrients

          Libes 1992

          nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

          nutrients become fully depleted during stratification

          Hydrocast gear

          Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

          Deploying the CTD

          CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

          CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

          Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

          Rigging the bottles

          Water sampling

          Drawing samples from the bottles

          Processing the samples

          Silica the upwelling nutrient

          Silicate (H2SiO4) Limits the growth of diatoms

          SiO2 (Silica) is an important nutrient only for diatoms

          Siliceous plankton make siliceous oozesDiatoms

          Shells are composed of silicon (Si)- (glass)

          Form silica deposits on ocean floor (siliceous ooze)radiolaria

          silicoflagellates

          Vertical distribution of nutrients

          Libes 1992

          nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

          In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

          The silica cycle (global view)

          Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

          Biological fixation and bio-pump sinking

          Siliceous sediments

          Upwelling of silica rich water

          Enhanced Diatom growth

          ( Siliceous based productivity)

          River input

          The biological pumphellip Not only controls carbon but the nutrients including silica

          Silica Siliceous sediments

          The conveyor belt circulation

          And thermohaline circulation moves through the systemhellip

          Horizontal distribution of Silicate

          We see a dramatic difference in distribution between the Atlantic and the Pacific

          Emerson and Hedges (2008)

          Silica the upwelling nutrient

          Silicate (H2SiO4) Limits the growth of diatoms

          SiO2 (Silica) is an important nutrient only for diatoms

          Upwelling zones are areas with high diatom productivity because silica is plentiful

          This is because silica from deep water is upwelled there

          Coastal Upwelling zones in the world ocean

          Mann and Lazire

          Open ocean zones of upwelling hellip

          Mann and Lazire

          Distribution of siliceous sediments

          Distribution of siliceous sediments largely aligns with upwelling zones

          Silica cycling in an upwelling zone

          Dissolved silica is present in deep waters

          Silica is fixed in the mixed layer

          Silica upwells

          1

          2

          34Diatoms die and the

          silica tests sink to the sediments while dissolving and may begin to release SiO2

          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

          This replenishes the SiO2 content of the water locally and can enhance its silica content

          Silica cycling in a coastal upwelling zone

          Dissolved silica is present in deep waters

          Silica is fixed in the mixed layer

          Silica upwells

          1

          2

          34

          Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

          This replenishes the SiO2 content of the water and can enhance its silica content

          Siliceous phyto planktonDiatoms radiolarians silicoflagellates

          Diatoms - plants

          Cell walls are composed of silicon (Si)- essentially glass

          Fixed this lecture

          bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

          goes logically through global and then to local coastal upwelling rather than back and forth

          • Nutrients their cycling and upwelling
          • Biolimiting constituents (aka nutrients)
          • Vertical distribution of nutrients
          • Slide Number 4
          • Light and nutrients determine where the productivity is
          • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
          • Productivity follows the nutrient availability
          • Oligotrophic ocean
          • New versus regenerated production
          • Cycling of nitrogen in the ocean
          • Nitrogen limitation and low oxygen
          • The simple Nitrogen cycle
          • Different oxidation states of nitrogen
          • The Nitrogen cycle- reality
          • Annual Stratification sequence
          • The Nitrogen cyclehellip when nutrients are low the saviors come along
          • Cycling of nitrogen in the ocean
          • The Nitrogen cyclehellip when things get tough
          • Low oxygen and the ldquospoilersrdquo
          • The Nitrogen cyclehellip the spoilers
          • The Nitrogen cyclehellip the whole story
          • The Marine nitrogen cycle
          • The Eutrophic ocean
          • Vertical distribution of nutrients
          • Hydrocast gear
          • Deploying the CTD
          • Rigging the bottles
          • Water sampling
          • Drawing samples from the bottles
          • Processing the samples
          • Slide Number 31
          • Silica the upwelling nutrient
          • Slide Number 33
          • Vertical distribution of nutrients
          • The silica cycle (global view)
          • The biological pumphellip
          • The conveyor belt circulation
          • Slide Number 38
          • Silica the upwelling nutrient
          • Coastal Upwelling zones in the world ocean
          • Open ocean zones of upwelling hellip
          • Distribution of siliceous sediments
          • Silica cycling in an upwelling zone
          • Silica cycling in a coastal upwelling zone
          • Slide Number 45
          • Slide Number 46
          • Fixed this lecture

            Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip

            PhytoplanktonZooplankton

            NutrientsR

            elat

            ive

            incr

            ease

            Mixing MixingStratified

            Light Temperature

            Spring bloom

            Fall mini-bloom

            Productivity follows the nutrient availability

            Oligotrophic ocean

            bull The nutrient point of view

            bull The underlying chemistrybull The controlling chemistry

            New versus regenerated production

            Lalli and Parsons

            Note the biggest arrow is upwelled NO3

            Cycling of nitrogen in the ocean

            Uptake and use is the dominant parthellip

            Biopump of nitrogen in the ocean

            Nitrogen limitation and low oxygen

            bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

            The simple Nitrogen cycle

            +V

            +III -III

            0

            -III

            Different oxidation states of nitrogen

            Libes 1992

            The Nitrogen cycle- reality

            +V

            +III -III

            0

            -III

            PhytoplanktonZooplankton

            NutrientsR

            elat

            ive

            incr

            ease

            Mixing MixingStratified

            Light Temperature

            Spring bloom

            Fall mini-bloom

            Annual Stratification sequence

            Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

            The Nitrogen cyclehellip when nutrients are low the saviors come along

            Energy intensive

            +V

            +III -III

            0

            -III

            Cycling of nitrogen in the ocean

            Uptake and use is the dominant parthellip

            The Nitrogen cyclehellip when things get tough

            Anaerobic Energy intensiveThe spoilers The saviors

            You see the other half of the cycle

            Low oxygen and the

            ldquospoilersrdquo ΣCO2

            The Nitrogen cyclehellip the spoilers

            Anaerobic respiration

            +V

            +III -III

            0

            -III

            Lost to the system

            The Nitrogen cyclehellip the whole story

            Anaerobic respiration

            Energy intensive

            +V

            +III -III

            0

            -III

            Lost to the system Input to the

            system

            Input to the system

            The Marine nitrogen cycleAerobic versus anaerobic

            The Eutrophic ocean

            bull In the open ocean upwelling is the eutrophicendmember

            bull The ecosystem is different and so is the controlling nutrient

            Vertical distribution of nutrients

            Libes 1992

            nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

            nutrients become fully depleted during stratification

            Hydrocast gear

            Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

            Deploying the CTD

            CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

            CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

            Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

            Rigging the bottles

            Water sampling

            Drawing samples from the bottles

            Processing the samples

            Silica the upwelling nutrient

            Silicate (H2SiO4) Limits the growth of diatoms

            SiO2 (Silica) is an important nutrient only for diatoms

            Siliceous plankton make siliceous oozesDiatoms

            Shells are composed of silicon (Si)- (glass)

            Form silica deposits on ocean floor (siliceous ooze)radiolaria

            silicoflagellates

            Vertical distribution of nutrients

            Libes 1992

            nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

            In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

            The silica cycle (global view)

            Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

            Biological fixation and bio-pump sinking

            Siliceous sediments

            Upwelling of silica rich water

            Enhanced Diatom growth

            ( Siliceous based productivity)

            River input

            The biological pumphellip Not only controls carbon but the nutrients including silica

            Silica Siliceous sediments

            The conveyor belt circulation

            And thermohaline circulation moves through the systemhellip

            Horizontal distribution of Silicate

            We see a dramatic difference in distribution between the Atlantic and the Pacific

            Emerson and Hedges (2008)

            Silica the upwelling nutrient

            Silicate (H2SiO4) Limits the growth of diatoms

            SiO2 (Silica) is an important nutrient only for diatoms

            Upwelling zones are areas with high diatom productivity because silica is plentiful

            This is because silica from deep water is upwelled there

            Coastal Upwelling zones in the world ocean

            Mann and Lazire

            Open ocean zones of upwelling hellip

            Mann and Lazire

            Distribution of siliceous sediments

            Distribution of siliceous sediments largely aligns with upwelling zones

            Silica cycling in an upwelling zone

            Dissolved silica is present in deep waters

            Silica is fixed in the mixed layer

            Silica upwells

            1

            2

            34Diatoms die and the

            silica tests sink to the sediments while dissolving and may begin to release SiO2

            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

            This replenishes the SiO2 content of the water locally and can enhance its silica content

            Silica cycling in a coastal upwelling zone

            Dissolved silica is present in deep waters

            Silica is fixed in the mixed layer

            Silica upwells

            1

            2

            34

            Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

            This replenishes the SiO2 content of the water and can enhance its silica content

            Siliceous phyto planktonDiatoms radiolarians silicoflagellates

            Diatoms - plants

            Cell walls are composed of silicon (Si)- essentially glass

            Fixed this lecture

            bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

            goes logically through global and then to local coastal upwelling rather than back and forth

            • Nutrients their cycling and upwelling
            • Biolimiting constituents (aka nutrients)
            • Vertical distribution of nutrients
            • Slide Number 4
            • Light and nutrients determine where the productivity is
            • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
            • Productivity follows the nutrient availability
            • Oligotrophic ocean
            • New versus regenerated production
            • Cycling of nitrogen in the ocean
            • Nitrogen limitation and low oxygen
            • The simple Nitrogen cycle
            • Different oxidation states of nitrogen
            • The Nitrogen cycle- reality
            • Annual Stratification sequence
            • The Nitrogen cyclehellip when nutrients are low the saviors come along
            • Cycling of nitrogen in the ocean
            • The Nitrogen cyclehellip when things get tough
            • Low oxygen and the ldquospoilersrdquo
            • The Nitrogen cyclehellip the spoilers
            • The Nitrogen cyclehellip the whole story
            • The Marine nitrogen cycle
            • The Eutrophic ocean
            • Vertical distribution of nutrients
            • Hydrocast gear
            • Deploying the CTD
            • Rigging the bottles
            • Water sampling
            • Drawing samples from the bottles
            • Processing the samples
            • Slide Number 31
            • Silica the upwelling nutrient
            • Slide Number 33
            • Vertical distribution of nutrients
            • The silica cycle (global view)
            • The biological pumphellip
            • The conveyor belt circulation
            • Slide Number 38
            • Silica the upwelling nutrient
            • Coastal Upwelling zones in the world ocean
            • Open ocean zones of upwelling hellip
            • Distribution of siliceous sediments
            • Silica cycling in an upwelling zone
            • Silica cycling in a coastal upwelling zone
            • Slide Number 45
            • Slide Number 46
            • Fixed this lecture

              PhytoplanktonZooplankton

              NutrientsR

              elat

              ive

              incr

              ease

              Mixing MixingStratified

              Light Temperature

              Spring bloom

              Fall mini-bloom

              Productivity follows the nutrient availability

              Oligotrophic ocean

              bull The nutrient point of view

              bull The underlying chemistrybull The controlling chemistry

              New versus regenerated production

              Lalli and Parsons

              Note the biggest arrow is upwelled NO3

              Cycling of nitrogen in the ocean

              Uptake and use is the dominant parthellip

              Biopump of nitrogen in the ocean

              Nitrogen limitation and low oxygen

              bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

              The simple Nitrogen cycle

              +V

              +III -III

              0

              -III

              Different oxidation states of nitrogen

              Libes 1992

              The Nitrogen cycle- reality

              +V

              +III -III

              0

              -III

              PhytoplanktonZooplankton

              NutrientsR

              elat

              ive

              incr

              ease

              Mixing MixingStratified

              Light Temperature

              Spring bloom

              Fall mini-bloom

              Annual Stratification sequence

              Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

              The Nitrogen cyclehellip when nutrients are low the saviors come along

              Energy intensive

              +V

              +III -III

              0

              -III

              Cycling of nitrogen in the ocean

              Uptake and use is the dominant parthellip

              The Nitrogen cyclehellip when things get tough

              Anaerobic Energy intensiveThe spoilers The saviors

              You see the other half of the cycle

              Low oxygen and the

              ldquospoilersrdquo ΣCO2

              The Nitrogen cyclehellip the spoilers

              Anaerobic respiration

              +V

              +III -III

              0

              -III

              Lost to the system

              The Nitrogen cyclehellip the whole story

              Anaerobic respiration

              Energy intensive

              +V

              +III -III

              0

              -III

              Lost to the system Input to the

              system

              Input to the system

              The Marine nitrogen cycleAerobic versus anaerobic

              The Eutrophic ocean

              bull In the open ocean upwelling is the eutrophicendmember

              bull The ecosystem is different and so is the controlling nutrient

              Vertical distribution of nutrients

              Libes 1992

              nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

              nutrients become fully depleted during stratification

              Hydrocast gear

              Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

              Deploying the CTD

              CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

              CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

              Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

              Rigging the bottles

              Water sampling

              Drawing samples from the bottles

              Processing the samples

              Silica the upwelling nutrient

              Silicate (H2SiO4) Limits the growth of diatoms

              SiO2 (Silica) is an important nutrient only for diatoms

              Siliceous plankton make siliceous oozesDiatoms

              Shells are composed of silicon (Si)- (glass)

              Form silica deposits on ocean floor (siliceous ooze)radiolaria

              silicoflagellates

              Vertical distribution of nutrients

              Libes 1992

              nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

              In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

              The silica cycle (global view)

              Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

              Biological fixation and bio-pump sinking

              Siliceous sediments

              Upwelling of silica rich water

              Enhanced Diatom growth

              ( Siliceous based productivity)

              River input

              The biological pumphellip Not only controls carbon but the nutrients including silica

              Silica Siliceous sediments

              The conveyor belt circulation

              And thermohaline circulation moves through the systemhellip

              Horizontal distribution of Silicate

              We see a dramatic difference in distribution between the Atlantic and the Pacific

              Emerson and Hedges (2008)

              Silica the upwelling nutrient

              Silicate (H2SiO4) Limits the growth of diatoms

              SiO2 (Silica) is an important nutrient only for diatoms

              Upwelling zones are areas with high diatom productivity because silica is plentiful

              This is because silica from deep water is upwelled there

              Coastal Upwelling zones in the world ocean

              Mann and Lazire

              Open ocean zones of upwelling hellip

              Mann and Lazire

              Distribution of siliceous sediments

              Distribution of siliceous sediments largely aligns with upwelling zones

              Silica cycling in an upwelling zone

              Dissolved silica is present in deep waters

              Silica is fixed in the mixed layer

              Silica upwells

              1

              2

              34Diatoms die and the

              silica tests sink to the sediments while dissolving and may begin to release SiO2

              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

              This replenishes the SiO2 content of the water locally and can enhance its silica content

              Silica cycling in a coastal upwelling zone

              Dissolved silica is present in deep waters

              Silica is fixed in the mixed layer

              Silica upwells

              1

              2

              34

              Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

              This replenishes the SiO2 content of the water and can enhance its silica content

              Siliceous phyto planktonDiatoms radiolarians silicoflagellates

              Diatoms - plants

              Cell walls are composed of silicon (Si)- essentially glass

              Fixed this lecture

              bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

              goes logically through global and then to local coastal upwelling rather than back and forth

              • Nutrients their cycling and upwelling
              • Biolimiting constituents (aka nutrients)
              • Vertical distribution of nutrients
              • Slide Number 4
              • Light and nutrients determine where the productivity is
              • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
              • Productivity follows the nutrient availability
              • Oligotrophic ocean
              • New versus regenerated production
              • Cycling of nitrogen in the ocean
              • Nitrogen limitation and low oxygen
              • The simple Nitrogen cycle
              • Different oxidation states of nitrogen
              • The Nitrogen cycle- reality
              • Annual Stratification sequence
              • The Nitrogen cyclehellip when nutrients are low the saviors come along
              • Cycling of nitrogen in the ocean
              • The Nitrogen cyclehellip when things get tough
              • Low oxygen and the ldquospoilersrdquo
              • The Nitrogen cyclehellip the spoilers
              • The Nitrogen cyclehellip the whole story
              • The Marine nitrogen cycle
              • The Eutrophic ocean
              • Vertical distribution of nutrients
              • Hydrocast gear
              • Deploying the CTD
              • Rigging the bottles
              • Water sampling
              • Drawing samples from the bottles
              • Processing the samples
              • Slide Number 31
              • Silica the upwelling nutrient
              • Slide Number 33
              • Vertical distribution of nutrients
              • The silica cycle (global view)
              • The biological pumphellip
              • The conveyor belt circulation
              • Slide Number 38
              • Silica the upwelling nutrient
              • Coastal Upwelling zones in the world ocean
              • Open ocean zones of upwelling hellip
              • Distribution of siliceous sediments
              • Silica cycling in an upwelling zone
              • Silica cycling in a coastal upwelling zone
              • Slide Number 45
              • Slide Number 46
              • Fixed this lecture

                Oligotrophic ocean

                bull The nutrient point of view

                bull The underlying chemistrybull The controlling chemistry

                New versus regenerated production

                Lalli and Parsons

                Note the biggest arrow is upwelled NO3

                Cycling of nitrogen in the ocean

                Uptake and use is the dominant parthellip

                Biopump of nitrogen in the ocean

                Nitrogen limitation and low oxygen

                bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

                The simple Nitrogen cycle

                +V

                +III -III

                0

                -III

                Different oxidation states of nitrogen

                Libes 1992

                The Nitrogen cycle- reality

                +V

                +III -III

                0

                -III

                PhytoplanktonZooplankton

                NutrientsR

                elat

                ive

                incr

                ease

                Mixing MixingStratified

                Light Temperature

                Spring bloom

                Fall mini-bloom

                Annual Stratification sequence

                Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                The Nitrogen cyclehellip when nutrients are low the saviors come along

                Energy intensive

                +V

                +III -III

                0

                -III

                Cycling of nitrogen in the ocean

                Uptake and use is the dominant parthellip

                The Nitrogen cyclehellip when things get tough

                Anaerobic Energy intensiveThe spoilers The saviors

                You see the other half of the cycle

                Low oxygen and the

                ldquospoilersrdquo ΣCO2

                The Nitrogen cyclehellip the spoilers

                Anaerobic respiration

                +V

                +III -III

                0

                -III

                Lost to the system

                The Nitrogen cyclehellip the whole story

                Anaerobic respiration

                Energy intensive

                +V

                +III -III

                0

                -III

                Lost to the system Input to the

                system

                Input to the system

                The Marine nitrogen cycleAerobic versus anaerobic

                The Eutrophic ocean

                bull In the open ocean upwelling is the eutrophicendmember

                bull The ecosystem is different and so is the controlling nutrient

                Vertical distribution of nutrients

                Libes 1992

                nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                nutrients become fully depleted during stratification

                Hydrocast gear

                Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                Deploying the CTD

                CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                Rigging the bottles

                Water sampling

                Drawing samples from the bottles

                Processing the samples

                Silica the upwelling nutrient

                Silicate (H2SiO4) Limits the growth of diatoms

                SiO2 (Silica) is an important nutrient only for diatoms

                Siliceous plankton make siliceous oozesDiatoms

                Shells are composed of silicon (Si)- (glass)

                Form silica deposits on ocean floor (siliceous ooze)radiolaria

                silicoflagellates

                Vertical distribution of nutrients

                Libes 1992

                nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                The silica cycle (global view)

                Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                Biological fixation and bio-pump sinking

                Siliceous sediments

                Upwelling of silica rich water

                Enhanced Diatom growth

                ( Siliceous based productivity)

                River input

                The biological pumphellip Not only controls carbon but the nutrients including silica

                Silica Siliceous sediments

                The conveyor belt circulation

                And thermohaline circulation moves through the systemhellip

                Horizontal distribution of Silicate

                We see a dramatic difference in distribution between the Atlantic and the Pacific

                Emerson and Hedges (2008)

                Silica the upwelling nutrient

                Silicate (H2SiO4) Limits the growth of diatoms

                SiO2 (Silica) is an important nutrient only for diatoms

                Upwelling zones are areas with high diatom productivity because silica is plentiful

                This is because silica from deep water is upwelled there

                Coastal Upwelling zones in the world ocean

                Mann and Lazire

                Open ocean zones of upwelling hellip

                Mann and Lazire

                Distribution of siliceous sediments

                Distribution of siliceous sediments largely aligns with upwelling zones

                Silica cycling in an upwelling zone

                Dissolved silica is present in deep waters

                Silica is fixed in the mixed layer

                Silica upwells

                1

                2

                34Diatoms die and the

                silica tests sink to the sediments while dissolving and may begin to release SiO2

                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                This replenishes the SiO2 content of the water locally and can enhance its silica content

                Silica cycling in a coastal upwelling zone

                Dissolved silica is present in deep waters

                Silica is fixed in the mixed layer

                Silica upwells

                1

                2

                34

                Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                This replenishes the SiO2 content of the water and can enhance its silica content

                Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                Diatoms - plants

                Cell walls are composed of silicon (Si)- essentially glass

                Fixed this lecture

                bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                goes logically through global and then to local coastal upwelling rather than back and forth

                • Nutrients their cycling and upwelling
                • Biolimiting constituents (aka nutrients)
                • Vertical distribution of nutrients
                • Slide Number 4
                • Light and nutrients determine where the productivity is
                • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                • Productivity follows the nutrient availability
                • Oligotrophic ocean
                • New versus regenerated production
                • Cycling of nitrogen in the ocean
                • Nitrogen limitation and low oxygen
                • The simple Nitrogen cycle
                • Different oxidation states of nitrogen
                • The Nitrogen cycle- reality
                • Annual Stratification sequence
                • The Nitrogen cyclehellip when nutrients are low the saviors come along
                • Cycling of nitrogen in the ocean
                • The Nitrogen cyclehellip when things get tough
                • Low oxygen and the ldquospoilersrdquo
                • The Nitrogen cyclehellip the spoilers
                • The Nitrogen cyclehellip the whole story
                • The Marine nitrogen cycle
                • The Eutrophic ocean
                • Vertical distribution of nutrients
                • Hydrocast gear
                • Deploying the CTD
                • Rigging the bottles
                • Water sampling
                • Drawing samples from the bottles
                • Processing the samples
                • Slide Number 31
                • Silica the upwelling nutrient
                • Slide Number 33
                • Vertical distribution of nutrients
                • The silica cycle (global view)
                • The biological pumphellip
                • The conveyor belt circulation
                • Slide Number 38
                • Silica the upwelling nutrient
                • Coastal Upwelling zones in the world ocean
                • Open ocean zones of upwelling hellip
                • Distribution of siliceous sediments
                • Silica cycling in an upwelling zone
                • Silica cycling in a coastal upwelling zone
                • Slide Number 45
                • Slide Number 46
                • Fixed this lecture

                  New versus regenerated production

                  Lalli and Parsons

                  Note the biggest arrow is upwelled NO3

                  Cycling of nitrogen in the ocean

                  Uptake and use is the dominant parthellip

                  Biopump of nitrogen in the ocean

                  Nitrogen limitation and low oxygen

                  bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

                  The simple Nitrogen cycle

                  +V

                  +III -III

                  0

                  -III

                  Different oxidation states of nitrogen

                  Libes 1992

                  The Nitrogen cycle- reality

                  +V

                  +III -III

                  0

                  -III

                  PhytoplanktonZooplankton

                  NutrientsR

                  elat

                  ive

                  incr

                  ease

                  Mixing MixingStratified

                  Light Temperature

                  Spring bloom

                  Fall mini-bloom

                  Annual Stratification sequence

                  Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                  The Nitrogen cyclehellip when nutrients are low the saviors come along

                  Energy intensive

                  +V

                  +III -III

                  0

                  -III

                  Cycling of nitrogen in the ocean

                  Uptake and use is the dominant parthellip

                  The Nitrogen cyclehellip when things get tough

                  Anaerobic Energy intensiveThe spoilers The saviors

                  You see the other half of the cycle

                  Low oxygen and the

                  ldquospoilersrdquo ΣCO2

                  The Nitrogen cyclehellip the spoilers

                  Anaerobic respiration

                  +V

                  +III -III

                  0

                  -III

                  Lost to the system

                  The Nitrogen cyclehellip the whole story

                  Anaerobic respiration

                  Energy intensive

                  +V

                  +III -III

                  0

                  -III

                  Lost to the system Input to the

                  system

                  Input to the system

                  The Marine nitrogen cycleAerobic versus anaerobic

                  The Eutrophic ocean

                  bull In the open ocean upwelling is the eutrophicendmember

                  bull The ecosystem is different and so is the controlling nutrient

                  Vertical distribution of nutrients

                  Libes 1992

                  nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                  nutrients become fully depleted during stratification

                  Hydrocast gear

                  Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                  Deploying the CTD

                  CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                  CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                  Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                  Rigging the bottles

                  Water sampling

                  Drawing samples from the bottles

                  Processing the samples

                  Silica the upwelling nutrient

                  Silicate (H2SiO4) Limits the growth of diatoms

                  SiO2 (Silica) is an important nutrient only for diatoms

                  Siliceous plankton make siliceous oozesDiatoms

                  Shells are composed of silicon (Si)- (glass)

                  Form silica deposits on ocean floor (siliceous ooze)radiolaria

                  silicoflagellates

                  Vertical distribution of nutrients

                  Libes 1992

                  nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                  In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                  The silica cycle (global view)

                  Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                  Biological fixation and bio-pump sinking

                  Siliceous sediments

                  Upwelling of silica rich water

                  Enhanced Diatom growth

                  ( Siliceous based productivity)

                  River input

                  The biological pumphellip Not only controls carbon but the nutrients including silica

                  Silica Siliceous sediments

                  The conveyor belt circulation

                  And thermohaline circulation moves through the systemhellip

                  Horizontal distribution of Silicate

                  We see a dramatic difference in distribution between the Atlantic and the Pacific

                  Emerson and Hedges (2008)

                  Silica the upwelling nutrient

                  Silicate (H2SiO4) Limits the growth of diatoms

                  SiO2 (Silica) is an important nutrient only for diatoms

                  Upwelling zones are areas with high diatom productivity because silica is plentiful

                  This is because silica from deep water is upwelled there

                  Coastal Upwelling zones in the world ocean

                  Mann and Lazire

                  Open ocean zones of upwelling hellip

                  Mann and Lazire

                  Distribution of siliceous sediments

                  Distribution of siliceous sediments largely aligns with upwelling zones

                  Silica cycling in an upwelling zone

                  Dissolved silica is present in deep waters

                  Silica is fixed in the mixed layer

                  Silica upwells

                  1

                  2

                  34Diatoms die and the

                  silica tests sink to the sediments while dissolving and may begin to release SiO2

                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                  This replenishes the SiO2 content of the water locally and can enhance its silica content

                  Silica cycling in a coastal upwelling zone

                  Dissolved silica is present in deep waters

                  Silica is fixed in the mixed layer

                  Silica upwells

                  1

                  2

                  34

                  Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                  This replenishes the SiO2 content of the water and can enhance its silica content

                  Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                  Diatoms - plants

                  Cell walls are composed of silicon (Si)- essentially glass

                  Fixed this lecture

                  bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                  goes logically through global and then to local coastal upwelling rather than back and forth

                  • Nutrients their cycling and upwelling
                  • Biolimiting constituents (aka nutrients)
                  • Vertical distribution of nutrients
                  • Slide Number 4
                  • Light and nutrients determine where the productivity is
                  • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                  • Productivity follows the nutrient availability
                  • Oligotrophic ocean
                  • New versus regenerated production
                  • Cycling of nitrogen in the ocean
                  • Nitrogen limitation and low oxygen
                  • The simple Nitrogen cycle
                  • Different oxidation states of nitrogen
                  • The Nitrogen cycle- reality
                  • Annual Stratification sequence
                  • The Nitrogen cyclehellip when nutrients are low the saviors come along
                  • Cycling of nitrogen in the ocean
                  • The Nitrogen cyclehellip when things get tough
                  • Low oxygen and the ldquospoilersrdquo
                  • The Nitrogen cyclehellip the spoilers
                  • The Nitrogen cyclehellip the whole story
                  • The Marine nitrogen cycle
                  • The Eutrophic ocean
                  • Vertical distribution of nutrients
                  • Hydrocast gear
                  • Deploying the CTD
                  • Rigging the bottles
                  • Water sampling
                  • Drawing samples from the bottles
                  • Processing the samples
                  • Slide Number 31
                  • Silica the upwelling nutrient
                  • Slide Number 33
                  • Vertical distribution of nutrients
                  • The silica cycle (global view)
                  • The biological pumphellip
                  • The conveyor belt circulation
                  • Slide Number 38
                  • Silica the upwelling nutrient
                  • Coastal Upwelling zones in the world ocean
                  • Open ocean zones of upwelling hellip
                  • Distribution of siliceous sediments
                  • Silica cycling in an upwelling zone
                  • Silica cycling in a coastal upwelling zone
                  • Slide Number 45
                  • Slide Number 46
                  • Fixed this lecture

                    Cycling of nitrogen in the ocean

                    Uptake and use is the dominant parthellip

                    Biopump of nitrogen in the ocean

                    Nitrogen limitation and low oxygen

                    bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

                    The simple Nitrogen cycle

                    +V

                    +III -III

                    0

                    -III

                    Different oxidation states of nitrogen

                    Libes 1992

                    The Nitrogen cycle- reality

                    +V

                    +III -III

                    0

                    -III

                    PhytoplanktonZooplankton

                    NutrientsR

                    elat

                    ive

                    incr

                    ease

                    Mixing MixingStratified

                    Light Temperature

                    Spring bloom

                    Fall mini-bloom

                    Annual Stratification sequence

                    Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                    The Nitrogen cyclehellip when nutrients are low the saviors come along

                    Energy intensive

                    +V

                    +III -III

                    0

                    -III

                    Cycling of nitrogen in the ocean

                    Uptake and use is the dominant parthellip

                    The Nitrogen cyclehellip when things get tough

                    Anaerobic Energy intensiveThe spoilers The saviors

                    You see the other half of the cycle

                    Low oxygen and the

                    ldquospoilersrdquo ΣCO2

                    The Nitrogen cyclehellip the spoilers

                    Anaerobic respiration

                    +V

                    +III -III

                    0

                    -III

                    Lost to the system

                    The Nitrogen cyclehellip the whole story

                    Anaerobic respiration

                    Energy intensive

                    +V

                    +III -III

                    0

                    -III

                    Lost to the system Input to the

                    system

                    Input to the system

                    The Marine nitrogen cycleAerobic versus anaerobic

                    The Eutrophic ocean

                    bull In the open ocean upwelling is the eutrophicendmember

                    bull The ecosystem is different and so is the controlling nutrient

                    Vertical distribution of nutrients

                    Libes 1992

                    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                    nutrients become fully depleted during stratification

                    Hydrocast gear

                    Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                    Deploying the CTD

                    CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                    CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                    Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                    Rigging the bottles

                    Water sampling

                    Drawing samples from the bottles

                    Processing the samples

                    Silica the upwelling nutrient

                    Silicate (H2SiO4) Limits the growth of diatoms

                    SiO2 (Silica) is an important nutrient only for diatoms

                    Siliceous plankton make siliceous oozesDiatoms

                    Shells are composed of silicon (Si)- (glass)

                    Form silica deposits on ocean floor (siliceous ooze)radiolaria

                    silicoflagellates

                    Vertical distribution of nutrients

                    Libes 1992

                    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                    In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                    The silica cycle (global view)

                    Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                    Biological fixation and bio-pump sinking

                    Siliceous sediments

                    Upwelling of silica rich water

                    Enhanced Diatom growth

                    ( Siliceous based productivity)

                    River input

                    The biological pumphellip Not only controls carbon but the nutrients including silica

                    Silica Siliceous sediments

                    The conveyor belt circulation

                    And thermohaline circulation moves through the systemhellip

                    Horizontal distribution of Silicate

                    We see a dramatic difference in distribution between the Atlantic and the Pacific

                    Emerson and Hedges (2008)

                    Silica the upwelling nutrient

                    Silicate (H2SiO4) Limits the growth of diatoms

                    SiO2 (Silica) is an important nutrient only for diatoms

                    Upwelling zones are areas with high diatom productivity because silica is plentiful

                    This is because silica from deep water is upwelled there

                    Coastal Upwelling zones in the world ocean

                    Mann and Lazire

                    Open ocean zones of upwelling hellip

                    Mann and Lazire

                    Distribution of siliceous sediments

                    Distribution of siliceous sediments largely aligns with upwelling zones

                    Silica cycling in an upwelling zone

                    Dissolved silica is present in deep waters

                    Silica is fixed in the mixed layer

                    Silica upwells

                    1

                    2

                    34Diatoms die and the

                    silica tests sink to the sediments while dissolving and may begin to release SiO2

                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                    This replenishes the SiO2 content of the water locally and can enhance its silica content

                    Silica cycling in a coastal upwelling zone

                    Dissolved silica is present in deep waters

                    Silica is fixed in the mixed layer

                    Silica upwells

                    1

                    2

                    34

                    Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                    This replenishes the SiO2 content of the water and can enhance its silica content

                    Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                    Diatoms - plants

                    Cell walls are composed of silicon (Si)- essentially glass

                    Fixed this lecture

                    bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                    goes logically through global and then to local coastal upwelling rather than back and forth

                    • Nutrients their cycling and upwelling
                    • Biolimiting constituents (aka nutrients)
                    • Vertical distribution of nutrients
                    • Slide Number 4
                    • Light and nutrients determine where the productivity is
                    • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                    • Productivity follows the nutrient availability
                    • Oligotrophic ocean
                    • New versus regenerated production
                    • Cycling of nitrogen in the ocean
                    • Nitrogen limitation and low oxygen
                    • The simple Nitrogen cycle
                    • Different oxidation states of nitrogen
                    • The Nitrogen cycle- reality
                    • Annual Stratification sequence
                    • The Nitrogen cyclehellip when nutrients are low the saviors come along
                    • Cycling of nitrogen in the ocean
                    • The Nitrogen cyclehellip when things get tough
                    • Low oxygen and the ldquospoilersrdquo
                    • The Nitrogen cyclehellip the spoilers
                    • The Nitrogen cyclehellip the whole story
                    • The Marine nitrogen cycle
                    • The Eutrophic ocean
                    • Vertical distribution of nutrients
                    • Hydrocast gear
                    • Deploying the CTD
                    • Rigging the bottles
                    • Water sampling
                    • Drawing samples from the bottles
                    • Processing the samples
                    • Slide Number 31
                    • Silica the upwelling nutrient
                    • Slide Number 33
                    • Vertical distribution of nutrients
                    • The silica cycle (global view)
                    • The biological pumphellip
                    • The conveyor belt circulation
                    • Slide Number 38
                    • Silica the upwelling nutrient
                    • Coastal Upwelling zones in the world ocean
                    • Open ocean zones of upwelling hellip
                    • Distribution of siliceous sediments
                    • Silica cycling in an upwelling zone
                    • Silica cycling in a coastal upwelling zone
                    • Slide Number 45
                    • Slide Number 46
                    • Fixed this lecture

                      Nitrogen limitation and low oxygen

                      bull ldquoLeaksrdquo in the simple nutrient storybull Nitrogen fixation uArrbull Denitrification dArr

                      The simple Nitrogen cycle

                      +V

                      +III -III

                      0

                      -III

                      Different oxidation states of nitrogen

                      Libes 1992

                      The Nitrogen cycle- reality

                      +V

                      +III -III

                      0

                      -III

                      PhytoplanktonZooplankton

                      NutrientsR

                      elat

                      ive

                      incr

                      ease

                      Mixing MixingStratified

                      Light Temperature

                      Spring bloom

                      Fall mini-bloom

                      Annual Stratification sequence

                      Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                      The Nitrogen cyclehellip when nutrients are low the saviors come along

                      Energy intensive

                      +V

                      +III -III

                      0

                      -III

                      Cycling of nitrogen in the ocean

                      Uptake and use is the dominant parthellip

                      The Nitrogen cyclehellip when things get tough

                      Anaerobic Energy intensiveThe spoilers The saviors

                      You see the other half of the cycle

                      Low oxygen and the

                      ldquospoilersrdquo ΣCO2

                      The Nitrogen cyclehellip the spoilers

                      Anaerobic respiration

                      +V

                      +III -III

                      0

                      -III

                      Lost to the system

                      The Nitrogen cyclehellip the whole story

                      Anaerobic respiration

                      Energy intensive

                      +V

                      +III -III

                      0

                      -III

                      Lost to the system Input to the

                      system

                      Input to the system

                      The Marine nitrogen cycleAerobic versus anaerobic

                      The Eutrophic ocean

                      bull In the open ocean upwelling is the eutrophicendmember

                      bull The ecosystem is different and so is the controlling nutrient

                      Vertical distribution of nutrients

                      Libes 1992

                      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                      nutrients become fully depleted during stratification

                      Hydrocast gear

                      Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                      Deploying the CTD

                      CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                      CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                      Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                      Rigging the bottles

                      Water sampling

                      Drawing samples from the bottles

                      Processing the samples

                      Silica the upwelling nutrient

                      Silicate (H2SiO4) Limits the growth of diatoms

                      SiO2 (Silica) is an important nutrient only for diatoms

                      Siliceous plankton make siliceous oozesDiatoms

                      Shells are composed of silicon (Si)- (glass)

                      Form silica deposits on ocean floor (siliceous ooze)radiolaria

                      silicoflagellates

                      Vertical distribution of nutrients

                      Libes 1992

                      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                      In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                      The silica cycle (global view)

                      Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                      Biological fixation and bio-pump sinking

                      Siliceous sediments

                      Upwelling of silica rich water

                      Enhanced Diatom growth

                      ( Siliceous based productivity)

                      River input

                      The biological pumphellip Not only controls carbon but the nutrients including silica

                      Silica Siliceous sediments

                      The conveyor belt circulation

                      And thermohaline circulation moves through the systemhellip

                      Horizontal distribution of Silicate

                      We see a dramatic difference in distribution between the Atlantic and the Pacific

                      Emerson and Hedges (2008)

                      Silica the upwelling nutrient

                      Silicate (H2SiO4) Limits the growth of diatoms

                      SiO2 (Silica) is an important nutrient only for diatoms

                      Upwelling zones are areas with high diatom productivity because silica is plentiful

                      This is because silica from deep water is upwelled there

                      Coastal Upwelling zones in the world ocean

                      Mann and Lazire

                      Open ocean zones of upwelling hellip

                      Mann and Lazire

                      Distribution of siliceous sediments

                      Distribution of siliceous sediments largely aligns with upwelling zones

                      Silica cycling in an upwelling zone

                      Dissolved silica is present in deep waters

                      Silica is fixed in the mixed layer

                      Silica upwells

                      1

                      2

                      34Diatoms die and the

                      silica tests sink to the sediments while dissolving and may begin to release SiO2

                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                      This replenishes the SiO2 content of the water locally and can enhance its silica content

                      Silica cycling in a coastal upwelling zone

                      Dissolved silica is present in deep waters

                      Silica is fixed in the mixed layer

                      Silica upwells

                      1

                      2

                      34

                      Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                      This replenishes the SiO2 content of the water and can enhance its silica content

                      Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                      Diatoms - plants

                      Cell walls are composed of silicon (Si)- essentially glass

                      Fixed this lecture

                      bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                      goes logically through global and then to local coastal upwelling rather than back and forth

                      • Nutrients their cycling and upwelling
                      • Biolimiting constituents (aka nutrients)
                      • Vertical distribution of nutrients
                      • Slide Number 4
                      • Light and nutrients determine where the productivity is
                      • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                      • Productivity follows the nutrient availability
                      • Oligotrophic ocean
                      • New versus regenerated production
                      • Cycling of nitrogen in the ocean
                      • Nitrogen limitation and low oxygen
                      • The simple Nitrogen cycle
                      • Different oxidation states of nitrogen
                      • The Nitrogen cycle- reality
                      • Annual Stratification sequence
                      • The Nitrogen cyclehellip when nutrients are low the saviors come along
                      • Cycling of nitrogen in the ocean
                      • The Nitrogen cyclehellip when things get tough
                      • Low oxygen and the ldquospoilersrdquo
                      • The Nitrogen cyclehellip the spoilers
                      • The Nitrogen cyclehellip the whole story
                      • The Marine nitrogen cycle
                      • The Eutrophic ocean
                      • Vertical distribution of nutrients
                      • Hydrocast gear
                      • Deploying the CTD
                      • Rigging the bottles
                      • Water sampling
                      • Drawing samples from the bottles
                      • Processing the samples
                      • Slide Number 31
                      • Silica the upwelling nutrient
                      • Slide Number 33
                      • Vertical distribution of nutrients
                      • The silica cycle (global view)
                      • The biological pumphellip
                      • The conveyor belt circulation
                      • Slide Number 38
                      • Silica the upwelling nutrient
                      • Coastal Upwelling zones in the world ocean
                      • Open ocean zones of upwelling hellip
                      • Distribution of siliceous sediments
                      • Silica cycling in an upwelling zone
                      • Silica cycling in a coastal upwelling zone
                      • Slide Number 45
                      • Slide Number 46
                      • Fixed this lecture

                        The simple Nitrogen cycle

                        +V

                        +III -III

                        0

                        -III

                        Different oxidation states of nitrogen

                        Libes 1992

                        The Nitrogen cycle- reality

                        +V

                        +III -III

                        0

                        -III

                        PhytoplanktonZooplankton

                        NutrientsR

                        elat

                        ive

                        incr

                        ease

                        Mixing MixingStratified

                        Light Temperature

                        Spring bloom

                        Fall mini-bloom

                        Annual Stratification sequence

                        Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                        The Nitrogen cyclehellip when nutrients are low the saviors come along

                        Energy intensive

                        +V

                        +III -III

                        0

                        -III

                        Cycling of nitrogen in the ocean

                        Uptake and use is the dominant parthellip

                        The Nitrogen cyclehellip when things get tough

                        Anaerobic Energy intensiveThe spoilers The saviors

                        You see the other half of the cycle

                        Low oxygen and the

                        ldquospoilersrdquo ΣCO2

                        The Nitrogen cyclehellip the spoilers

                        Anaerobic respiration

                        +V

                        +III -III

                        0

                        -III

                        Lost to the system

                        The Nitrogen cyclehellip the whole story

                        Anaerobic respiration

                        Energy intensive

                        +V

                        +III -III

                        0

                        -III

                        Lost to the system Input to the

                        system

                        Input to the system

                        The Marine nitrogen cycleAerobic versus anaerobic

                        The Eutrophic ocean

                        bull In the open ocean upwelling is the eutrophicendmember

                        bull The ecosystem is different and so is the controlling nutrient

                        Vertical distribution of nutrients

                        Libes 1992

                        nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                        nutrients become fully depleted during stratification

                        Hydrocast gear

                        Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                        Deploying the CTD

                        CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                        CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                        Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                        Rigging the bottles

                        Water sampling

                        Drawing samples from the bottles

                        Processing the samples

                        Silica the upwelling nutrient

                        Silicate (H2SiO4) Limits the growth of diatoms

                        SiO2 (Silica) is an important nutrient only for diatoms

                        Siliceous plankton make siliceous oozesDiatoms

                        Shells are composed of silicon (Si)- (glass)

                        Form silica deposits on ocean floor (siliceous ooze)radiolaria

                        silicoflagellates

                        Vertical distribution of nutrients

                        Libes 1992

                        nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                        In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                        The silica cycle (global view)

                        Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                        Biological fixation and bio-pump sinking

                        Siliceous sediments

                        Upwelling of silica rich water

                        Enhanced Diatom growth

                        ( Siliceous based productivity)

                        River input

                        The biological pumphellip Not only controls carbon but the nutrients including silica

                        Silica Siliceous sediments

                        The conveyor belt circulation

                        And thermohaline circulation moves through the systemhellip

                        Horizontal distribution of Silicate

                        We see a dramatic difference in distribution between the Atlantic and the Pacific

                        Emerson and Hedges (2008)

                        Silica the upwelling nutrient

                        Silicate (H2SiO4) Limits the growth of diatoms

                        SiO2 (Silica) is an important nutrient only for diatoms

                        Upwelling zones are areas with high diatom productivity because silica is plentiful

                        This is because silica from deep water is upwelled there

                        Coastal Upwelling zones in the world ocean

                        Mann and Lazire

                        Open ocean zones of upwelling hellip

                        Mann and Lazire

                        Distribution of siliceous sediments

                        Distribution of siliceous sediments largely aligns with upwelling zones

                        Silica cycling in an upwelling zone

                        Dissolved silica is present in deep waters

                        Silica is fixed in the mixed layer

                        Silica upwells

                        1

                        2

                        34Diatoms die and the

                        silica tests sink to the sediments while dissolving and may begin to release SiO2

                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                        This replenishes the SiO2 content of the water locally and can enhance its silica content

                        Silica cycling in a coastal upwelling zone

                        Dissolved silica is present in deep waters

                        Silica is fixed in the mixed layer

                        Silica upwells

                        1

                        2

                        34

                        Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                        This replenishes the SiO2 content of the water and can enhance its silica content

                        Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                        Diatoms - plants

                        Cell walls are composed of silicon (Si)- essentially glass

                        Fixed this lecture

                        bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                        goes logically through global and then to local coastal upwelling rather than back and forth

                        • Nutrients their cycling and upwelling
                        • Biolimiting constituents (aka nutrients)
                        • Vertical distribution of nutrients
                        • Slide Number 4
                        • Light and nutrients determine where the productivity is
                        • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                        • Productivity follows the nutrient availability
                        • Oligotrophic ocean
                        • New versus regenerated production
                        • Cycling of nitrogen in the ocean
                        • Nitrogen limitation and low oxygen
                        • The simple Nitrogen cycle
                        • Different oxidation states of nitrogen
                        • The Nitrogen cycle- reality
                        • Annual Stratification sequence
                        • The Nitrogen cyclehellip when nutrients are low the saviors come along
                        • Cycling of nitrogen in the ocean
                        • The Nitrogen cyclehellip when things get tough
                        • Low oxygen and the ldquospoilersrdquo
                        • The Nitrogen cyclehellip the spoilers
                        • The Nitrogen cyclehellip the whole story
                        • The Marine nitrogen cycle
                        • The Eutrophic ocean
                        • Vertical distribution of nutrients
                        • Hydrocast gear
                        • Deploying the CTD
                        • Rigging the bottles
                        • Water sampling
                        • Drawing samples from the bottles
                        • Processing the samples
                        • Slide Number 31
                        • Silica the upwelling nutrient
                        • Slide Number 33
                        • Vertical distribution of nutrients
                        • The silica cycle (global view)
                        • The biological pumphellip
                        • The conveyor belt circulation
                        • Slide Number 38
                        • Silica the upwelling nutrient
                        • Coastal Upwelling zones in the world ocean
                        • Open ocean zones of upwelling hellip
                        • Distribution of siliceous sediments
                        • Silica cycling in an upwelling zone
                        • Silica cycling in a coastal upwelling zone
                        • Slide Number 45
                        • Slide Number 46
                        • Fixed this lecture

                          Different oxidation states of nitrogen

                          Libes 1992

                          The Nitrogen cycle- reality

                          +V

                          +III -III

                          0

                          -III

                          PhytoplanktonZooplankton

                          NutrientsR

                          elat

                          ive

                          incr

                          ease

                          Mixing MixingStratified

                          Light Temperature

                          Spring bloom

                          Fall mini-bloom

                          Annual Stratification sequence

                          Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                          The Nitrogen cyclehellip when nutrients are low the saviors come along

                          Energy intensive

                          +V

                          +III -III

                          0

                          -III

                          Cycling of nitrogen in the ocean

                          Uptake and use is the dominant parthellip

                          The Nitrogen cyclehellip when things get tough

                          Anaerobic Energy intensiveThe spoilers The saviors

                          You see the other half of the cycle

                          Low oxygen and the

                          ldquospoilersrdquo ΣCO2

                          The Nitrogen cyclehellip the spoilers

                          Anaerobic respiration

                          +V

                          +III -III

                          0

                          -III

                          Lost to the system

                          The Nitrogen cyclehellip the whole story

                          Anaerobic respiration

                          Energy intensive

                          +V

                          +III -III

                          0

                          -III

                          Lost to the system Input to the

                          system

                          Input to the system

                          The Marine nitrogen cycleAerobic versus anaerobic

                          The Eutrophic ocean

                          bull In the open ocean upwelling is the eutrophicendmember

                          bull The ecosystem is different and so is the controlling nutrient

                          Vertical distribution of nutrients

                          Libes 1992

                          nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                          nutrients become fully depleted during stratification

                          Hydrocast gear

                          Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                          Deploying the CTD

                          CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                          CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                          Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                          Rigging the bottles

                          Water sampling

                          Drawing samples from the bottles

                          Processing the samples

                          Silica the upwelling nutrient

                          Silicate (H2SiO4) Limits the growth of diatoms

                          SiO2 (Silica) is an important nutrient only for diatoms

                          Siliceous plankton make siliceous oozesDiatoms

                          Shells are composed of silicon (Si)- (glass)

                          Form silica deposits on ocean floor (siliceous ooze)radiolaria

                          silicoflagellates

                          Vertical distribution of nutrients

                          Libes 1992

                          nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                          In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                          The silica cycle (global view)

                          Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                          Biological fixation and bio-pump sinking

                          Siliceous sediments

                          Upwelling of silica rich water

                          Enhanced Diatom growth

                          ( Siliceous based productivity)

                          River input

                          The biological pumphellip Not only controls carbon but the nutrients including silica

                          Silica Siliceous sediments

                          The conveyor belt circulation

                          And thermohaline circulation moves through the systemhellip

                          Horizontal distribution of Silicate

                          We see a dramatic difference in distribution between the Atlantic and the Pacific

                          Emerson and Hedges (2008)

                          Silica the upwelling nutrient

                          Silicate (H2SiO4) Limits the growth of diatoms

                          SiO2 (Silica) is an important nutrient only for diatoms

                          Upwelling zones are areas with high diatom productivity because silica is plentiful

                          This is because silica from deep water is upwelled there

                          Coastal Upwelling zones in the world ocean

                          Mann and Lazire

                          Open ocean zones of upwelling hellip

                          Mann and Lazire

                          Distribution of siliceous sediments

                          Distribution of siliceous sediments largely aligns with upwelling zones

                          Silica cycling in an upwelling zone

                          Dissolved silica is present in deep waters

                          Silica is fixed in the mixed layer

                          Silica upwells

                          1

                          2

                          34Diatoms die and the

                          silica tests sink to the sediments while dissolving and may begin to release SiO2

                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                          This replenishes the SiO2 content of the water locally and can enhance its silica content

                          Silica cycling in a coastal upwelling zone

                          Dissolved silica is present in deep waters

                          Silica is fixed in the mixed layer

                          Silica upwells

                          1

                          2

                          34

                          Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                          This replenishes the SiO2 content of the water and can enhance its silica content

                          Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                          Diatoms - plants

                          Cell walls are composed of silicon (Si)- essentially glass

                          Fixed this lecture

                          bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                          goes logically through global and then to local coastal upwelling rather than back and forth

                          • Nutrients their cycling and upwelling
                          • Biolimiting constituents (aka nutrients)
                          • Vertical distribution of nutrients
                          • Slide Number 4
                          • Light and nutrients determine where the productivity is
                          • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                          • Productivity follows the nutrient availability
                          • Oligotrophic ocean
                          • New versus regenerated production
                          • Cycling of nitrogen in the ocean
                          • Nitrogen limitation and low oxygen
                          • The simple Nitrogen cycle
                          • Different oxidation states of nitrogen
                          • The Nitrogen cycle- reality
                          • Annual Stratification sequence
                          • The Nitrogen cyclehellip when nutrients are low the saviors come along
                          • Cycling of nitrogen in the ocean
                          • The Nitrogen cyclehellip when things get tough
                          • Low oxygen and the ldquospoilersrdquo
                          • The Nitrogen cyclehellip the spoilers
                          • The Nitrogen cyclehellip the whole story
                          • The Marine nitrogen cycle
                          • The Eutrophic ocean
                          • Vertical distribution of nutrients
                          • Hydrocast gear
                          • Deploying the CTD
                          • Rigging the bottles
                          • Water sampling
                          • Drawing samples from the bottles
                          • Processing the samples
                          • Slide Number 31
                          • Silica the upwelling nutrient
                          • Slide Number 33
                          • Vertical distribution of nutrients
                          • The silica cycle (global view)
                          • The biological pumphellip
                          • The conveyor belt circulation
                          • Slide Number 38
                          • Silica the upwelling nutrient
                          • Coastal Upwelling zones in the world ocean
                          • Open ocean zones of upwelling hellip
                          • Distribution of siliceous sediments
                          • Silica cycling in an upwelling zone
                          • Silica cycling in a coastal upwelling zone
                          • Slide Number 45
                          • Slide Number 46
                          • Fixed this lecture

                            The Nitrogen cycle- reality

                            +V

                            +III -III

                            0

                            -III

                            PhytoplanktonZooplankton

                            NutrientsR

                            elat

                            ive

                            incr

                            ease

                            Mixing MixingStratified

                            Light Temperature

                            Spring bloom

                            Fall mini-bloom

                            Annual Stratification sequence

                            Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                            The Nitrogen cyclehellip when nutrients are low the saviors come along

                            Energy intensive

                            +V

                            +III -III

                            0

                            -III

                            Cycling of nitrogen in the ocean

                            Uptake and use is the dominant parthellip

                            The Nitrogen cyclehellip when things get tough

                            Anaerobic Energy intensiveThe spoilers The saviors

                            You see the other half of the cycle

                            Low oxygen and the

                            ldquospoilersrdquo ΣCO2

                            The Nitrogen cyclehellip the spoilers

                            Anaerobic respiration

                            +V

                            +III -III

                            0

                            -III

                            Lost to the system

                            The Nitrogen cyclehellip the whole story

                            Anaerobic respiration

                            Energy intensive

                            +V

                            +III -III

                            0

                            -III

                            Lost to the system Input to the

                            system

                            Input to the system

                            The Marine nitrogen cycleAerobic versus anaerobic

                            The Eutrophic ocean

                            bull In the open ocean upwelling is the eutrophicendmember

                            bull The ecosystem is different and so is the controlling nutrient

                            Vertical distribution of nutrients

                            Libes 1992

                            nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                            nutrients become fully depleted during stratification

                            Hydrocast gear

                            Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                            Deploying the CTD

                            CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                            CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                            Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                            Rigging the bottles

                            Water sampling

                            Drawing samples from the bottles

                            Processing the samples

                            Silica the upwelling nutrient

                            Silicate (H2SiO4) Limits the growth of diatoms

                            SiO2 (Silica) is an important nutrient only for diatoms

                            Siliceous plankton make siliceous oozesDiatoms

                            Shells are composed of silicon (Si)- (glass)

                            Form silica deposits on ocean floor (siliceous ooze)radiolaria

                            silicoflagellates

                            Vertical distribution of nutrients

                            Libes 1992

                            nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                            In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                            The silica cycle (global view)

                            Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                            Biological fixation and bio-pump sinking

                            Siliceous sediments

                            Upwelling of silica rich water

                            Enhanced Diatom growth

                            ( Siliceous based productivity)

                            River input

                            The biological pumphellip Not only controls carbon but the nutrients including silica

                            Silica Siliceous sediments

                            The conveyor belt circulation

                            And thermohaline circulation moves through the systemhellip

                            Horizontal distribution of Silicate

                            We see a dramatic difference in distribution between the Atlantic and the Pacific

                            Emerson and Hedges (2008)

                            Silica the upwelling nutrient

                            Silicate (H2SiO4) Limits the growth of diatoms

                            SiO2 (Silica) is an important nutrient only for diatoms

                            Upwelling zones are areas with high diatom productivity because silica is plentiful

                            This is because silica from deep water is upwelled there

                            Coastal Upwelling zones in the world ocean

                            Mann and Lazire

                            Open ocean zones of upwelling hellip

                            Mann and Lazire

                            Distribution of siliceous sediments

                            Distribution of siliceous sediments largely aligns with upwelling zones

                            Silica cycling in an upwelling zone

                            Dissolved silica is present in deep waters

                            Silica is fixed in the mixed layer

                            Silica upwells

                            1

                            2

                            34Diatoms die and the

                            silica tests sink to the sediments while dissolving and may begin to release SiO2

                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                            This replenishes the SiO2 content of the water locally and can enhance its silica content

                            Silica cycling in a coastal upwelling zone

                            Dissolved silica is present in deep waters

                            Silica is fixed in the mixed layer

                            Silica upwells

                            1

                            2

                            34

                            Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                            This replenishes the SiO2 content of the water and can enhance its silica content

                            Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                            Diatoms - plants

                            Cell walls are composed of silicon (Si)- essentially glass

                            Fixed this lecture

                            bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                            goes logically through global and then to local coastal upwelling rather than back and forth

                            • Nutrients their cycling and upwelling
                            • Biolimiting constituents (aka nutrients)
                            • Vertical distribution of nutrients
                            • Slide Number 4
                            • Light and nutrients determine where the productivity is
                            • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                            • Productivity follows the nutrient availability
                            • Oligotrophic ocean
                            • New versus regenerated production
                            • Cycling of nitrogen in the ocean
                            • Nitrogen limitation and low oxygen
                            • The simple Nitrogen cycle
                            • Different oxidation states of nitrogen
                            • The Nitrogen cycle- reality
                            • Annual Stratification sequence
                            • The Nitrogen cyclehellip when nutrients are low the saviors come along
                            • Cycling of nitrogen in the ocean
                            • The Nitrogen cyclehellip when things get tough
                            • Low oxygen and the ldquospoilersrdquo
                            • The Nitrogen cyclehellip the spoilers
                            • The Nitrogen cyclehellip the whole story
                            • The Marine nitrogen cycle
                            • The Eutrophic ocean
                            • Vertical distribution of nutrients
                            • Hydrocast gear
                            • Deploying the CTD
                            • Rigging the bottles
                            • Water sampling
                            • Drawing samples from the bottles
                            • Processing the samples
                            • Slide Number 31
                            • Silica the upwelling nutrient
                            • Slide Number 33
                            • Vertical distribution of nutrients
                            • The silica cycle (global view)
                            • The biological pumphellip
                            • The conveyor belt circulation
                            • Slide Number 38
                            • Silica the upwelling nutrient
                            • Coastal Upwelling zones in the world ocean
                            • Open ocean zones of upwelling hellip
                            • Distribution of siliceous sediments
                            • Silica cycling in an upwelling zone
                            • Silica cycling in a coastal upwelling zone
                            • Slide Number 45
                            • Slide Number 46
                            • Fixed this lecture

                              PhytoplanktonZooplankton

                              NutrientsR

                              elat

                              ive

                              incr

                              ease

                              Mixing MixingStratified

                              Light Temperature

                              Spring bloom

                              Fall mini-bloom

                              Annual Stratification sequence

                              Recycling of nutrients at itrsquos peakhellip and nutrients at a minimum productivity slows down respiration picks uphellip

                              The Nitrogen cyclehellip when nutrients are low the saviors come along

                              Energy intensive

                              +V

                              +III -III

                              0

                              -III

                              Cycling of nitrogen in the ocean

                              Uptake and use is the dominant parthellip

                              The Nitrogen cyclehellip when things get tough

                              Anaerobic Energy intensiveThe spoilers The saviors

                              You see the other half of the cycle

                              Low oxygen and the

                              ldquospoilersrdquo ΣCO2

                              The Nitrogen cyclehellip the spoilers

                              Anaerobic respiration

                              +V

                              +III -III

                              0

                              -III

                              Lost to the system

                              The Nitrogen cyclehellip the whole story

                              Anaerobic respiration

                              Energy intensive

                              +V

                              +III -III

                              0

                              -III

                              Lost to the system Input to the

                              system

                              Input to the system

                              The Marine nitrogen cycleAerobic versus anaerobic

                              The Eutrophic ocean

                              bull In the open ocean upwelling is the eutrophicendmember

                              bull The ecosystem is different and so is the controlling nutrient

                              Vertical distribution of nutrients

                              Libes 1992

                              nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                              nutrients become fully depleted during stratification

                              Hydrocast gear

                              Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                              Deploying the CTD

                              CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                              CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                              Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                              Rigging the bottles

                              Water sampling

                              Drawing samples from the bottles

                              Processing the samples

                              Silica the upwelling nutrient

                              Silicate (H2SiO4) Limits the growth of diatoms

                              SiO2 (Silica) is an important nutrient only for diatoms

                              Siliceous plankton make siliceous oozesDiatoms

                              Shells are composed of silicon (Si)- (glass)

                              Form silica deposits on ocean floor (siliceous ooze)radiolaria

                              silicoflagellates

                              Vertical distribution of nutrients

                              Libes 1992

                              nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                              In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                              The silica cycle (global view)

                              Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                              Biological fixation and bio-pump sinking

                              Siliceous sediments

                              Upwelling of silica rich water

                              Enhanced Diatom growth

                              ( Siliceous based productivity)

                              River input

                              The biological pumphellip Not only controls carbon but the nutrients including silica

                              Silica Siliceous sediments

                              The conveyor belt circulation

                              And thermohaline circulation moves through the systemhellip

                              Horizontal distribution of Silicate

                              We see a dramatic difference in distribution between the Atlantic and the Pacific

                              Emerson and Hedges (2008)

                              Silica the upwelling nutrient

                              Silicate (H2SiO4) Limits the growth of diatoms

                              SiO2 (Silica) is an important nutrient only for diatoms

                              Upwelling zones are areas with high diatom productivity because silica is plentiful

                              This is because silica from deep water is upwelled there

                              Coastal Upwelling zones in the world ocean

                              Mann and Lazire

                              Open ocean zones of upwelling hellip

                              Mann and Lazire

                              Distribution of siliceous sediments

                              Distribution of siliceous sediments largely aligns with upwelling zones

                              Silica cycling in an upwelling zone

                              Dissolved silica is present in deep waters

                              Silica is fixed in the mixed layer

                              Silica upwells

                              1

                              2

                              34Diatoms die and the

                              silica tests sink to the sediments while dissolving and may begin to release SiO2

                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                              This replenishes the SiO2 content of the water locally and can enhance its silica content

                              Silica cycling in a coastal upwelling zone

                              Dissolved silica is present in deep waters

                              Silica is fixed in the mixed layer

                              Silica upwells

                              1

                              2

                              34

                              Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                              This replenishes the SiO2 content of the water and can enhance its silica content

                              Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                              Diatoms - plants

                              Cell walls are composed of silicon (Si)- essentially glass

                              Fixed this lecture

                              bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                              goes logically through global and then to local coastal upwelling rather than back and forth

                              • Nutrients their cycling and upwelling
                              • Biolimiting constituents (aka nutrients)
                              • Vertical distribution of nutrients
                              • Slide Number 4
                              • Light and nutrients determine where the productivity is
                              • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                              • Productivity follows the nutrient availability
                              • Oligotrophic ocean
                              • New versus regenerated production
                              • Cycling of nitrogen in the ocean
                              • Nitrogen limitation and low oxygen
                              • The simple Nitrogen cycle
                              • Different oxidation states of nitrogen
                              • The Nitrogen cycle- reality
                              • Annual Stratification sequence
                              • The Nitrogen cyclehellip when nutrients are low the saviors come along
                              • Cycling of nitrogen in the ocean
                              • The Nitrogen cyclehellip when things get tough
                              • Low oxygen and the ldquospoilersrdquo
                              • The Nitrogen cyclehellip the spoilers
                              • The Nitrogen cyclehellip the whole story
                              • The Marine nitrogen cycle
                              • The Eutrophic ocean
                              • Vertical distribution of nutrients
                              • Hydrocast gear
                              • Deploying the CTD
                              • Rigging the bottles
                              • Water sampling
                              • Drawing samples from the bottles
                              • Processing the samples
                              • Slide Number 31
                              • Silica the upwelling nutrient
                              • Slide Number 33
                              • Vertical distribution of nutrients
                              • The silica cycle (global view)
                              • The biological pumphellip
                              • The conveyor belt circulation
                              • Slide Number 38
                              • Silica the upwelling nutrient
                              • Coastal Upwelling zones in the world ocean
                              • Open ocean zones of upwelling hellip
                              • Distribution of siliceous sediments
                              • Silica cycling in an upwelling zone
                              • Silica cycling in a coastal upwelling zone
                              • Slide Number 45
                              • Slide Number 46
                              • Fixed this lecture

                                The Nitrogen cyclehellip when nutrients are low the saviors come along

                                Energy intensive

                                +V

                                +III -III

                                0

                                -III

                                Cycling of nitrogen in the ocean

                                Uptake and use is the dominant parthellip

                                The Nitrogen cyclehellip when things get tough

                                Anaerobic Energy intensiveThe spoilers The saviors

                                You see the other half of the cycle

                                Low oxygen and the

                                ldquospoilersrdquo ΣCO2

                                The Nitrogen cyclehellip the spoilers

                                Anaerobic respiration

                                +V

                                +III -III

                                0

                                -III

                                Lost to the system

                                The Nitrogen cyclehellip the whole story

                                Anaerobic respiration

                                Energy intensive

                                +V

                                +III -III

                                0

                                -III

                                Lost to the system Input to the

                                system

                                Input to the system

                                The Marine nitrogen cycleAerobic versus anaerobic

                                The Eutrophic ocean

                                bull In the open ocean upwelling is the eutrophicendmember

                                bull The ecosystem is different and so is the controlling nutrient

                                Vertical distribution of nutrients

                                Libes 1992

                                nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                nutrients become fully depleted during stratification

                                Hydrocast gear

                                Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                Deploying the CTD

                                CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                Rigging the bottles

                                Water sampling

                                Drawing samples from the bottles

                                Processing the samples

                                Silica the upwelling nutrient

                                Silicate (H2SiO4) Limits the growth of diatoms

                                SiO2 (Silica) is an important nutrient only for diatoms

                                Siliceous plankton make siliceous oozesDiatoms

                                Shells are composed of silicon (Si)- (glass)

                                Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                silicoflagellates

                                Vertical distribution of nutrients

                                Libes 1992

                                nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                The silica cycle (global view)

                                Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                Biological fixation and bio-pump sinking

                                Siliceous sediments

                                Upwelling of silica rich water

                                Enhanced Diatom growth

                                ( Siliceous based productivity)

                                River input

                                The biological pumphellip Not only controls carbon but the nutrients including silica

                                Silica Siliceous sediments

                                The conveyor belt circulation

                                And thermohaline circulation moves through the systemhellip

                                Horizontal distribution of Silicate

                                We see a dramatic difference in distribution between the Atlantic and the Pacific

                                Emerson and Hedges (2008)

                                Silica the upwelling nutrient

                                Silicate (H2SiO4) Limits the growth of diatoms

                                SiO2 (Silica) is an important nutrient only for diatoms

                                Upwelling zones are areas with high diatom productivity because silica is plentiful

                                This is because silica from deep water is upwelled there

                                Coastal Upwelling zones in the world ocean

                                Mann and Lazire

                                Open ocean zones of upwelling hellip

                                Mann and Lazire

                                Distribution of siliceous sediments

                                Distribution of siliceous sediments largely aligns with upwelling zones

                                Silica cycling in an upwelling zone

                                Dissolved silica is present in deep waters

                                Silica is fixed in the mixed layer

                                Silica upwells

                                1

                                2

                                34Diatoms die and the

                                silica tests sink to the sediments while dissolving and may begin to release SiO2

                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                This replenishes the SiO2 content of the water locally and can enhance its silica content

                                Silica cycling in a coastal upwelling zone

                                Dissolved silica is present in deep waters

                                Silica is fixed in the mixed layer

                                Silica upwells

                                1

                                2

                                34

                                Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                This replenishes the SiO2 content of the water and can enhance its silica content

                                Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                Diatoms - plants

                                Cell walls are composed of silicon (Si)- essentially glass

                                Fixed this lecture

                                bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                goes logically through global and then to local coastal upwelling rather than back and forth

                                • Nutrients their cycling and upwelling
                                • Biolimiting constituents (aka nutrients)
                                • Vertical distribution of nutrients
                                • Slide Number 4
                                • Light and nutrients determine where the productivity is
                                • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                • Productivity follows the nutrient availability
                                • Oligotrophic ocean
                                • New versus regenerated production
                                • Cycling of nitrogen in the ocean
                                • Nitrogen limitation and low oxygen
                                • The simple Nitrogen cycle
                                • Different oxidation states of nitrogen
                                • The Nitrogen cycle- reality
                                • Annual Stratification sequence
                                • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                • Cycling of nitrogen in the ocean
                                • The Nitrogen cyclehellip when things get tough
                                • Low oxygen and the ldquospoilersrdquo
                                • The Nitrogen cyclehellip the spoilers
                                • The Nitrogen cyclehellip the whole story
                                • The Marine nitrogen cycle
                                • The Eutrophic ocean
                                • Vertical distribution of nutrients
                                • Hydrocast gear
                                • Deploying the CTD
                                • Rigging the bottles
                                • Water sampling
                                • Drawing samples from the bottles
                                • Processing the samples
                                • Slide Number 31
                                • Silica the upwelling nutrient
                                • Slide Number 33
                                • Vertical distribution of nutrients
                                • The silica cycle (global view)
                                • The biological pumphellip
                                • The conveyor belt circulation
                                • Slide Number 38
                                • Silica the upwelling nutrient
                                • Coastal Upwelling zones in the world ocean
                                • Open ocean zones of upwelling hellip
                                • Distribution of siliceous sediments
                                • Silica cycling in an upwelling zone
                                • Silica cycling in a coastal upwelling zone
                                • Slide Number 45
                                • Slide Number 46
                                • Fixed this lecture

                                  Cycling of nitrogen in the ocean

                                  Uptake and use is the dominant parthellip

                                  The Nitrogen cyclehellip when things get tough

                                  Anaerobic Energy intensiveThe spoilers The saviors

                                  You see the other half of the cycle

                                  Low oxygen and the

                                  ldquospoilersrdquo ΣCO2

                                  The Nitrogen cyclehellip the spoilers

                                  Anaerobic respiration

                                  +V

                                  +III -III

                                  0

                                  -III

                                  Lost to the system

                                  The Nitrogen cyclehellip the whole story

                                  Anaerobic respiration

                                  Energy intensive

                                  +V

                                  +III -III

                                  0

                                  -III

                                  Lost to the system Input to the

                                  system

                                  Input to the system

                                  The Marine nitrogen cycleAerobic versus anaerobic

                                  The Eutrophic ocean

                                  bull In the open ocean upwelling is the eutrophicendmember

                                  bull The ecosystem is different and so is the controlling nutrient

                                  Vertical distribution of nutrients

                                  Libes 1992

                                  nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                  nutrients become fully depleted during stratification

                                  Hydrocast gear

                                  Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                  Deploying the CTD

                                  CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                  CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                  Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                  Rigging the bottles

                                  Water sampling

                                  Drawing samples from the bottles

                                  Processing the samples

                                  Silica the upwelling nutrient

                                  Silicate (H2SiO4) Limits the growth of diatoms

                                  SiO2 (Silica) is an important nutrient only for diatoms

                                  Siliceous plankton make siliceous oozesDiatoms

                                  Shells are composed of silicon (Si)- (glass)

                                  Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                  silicoflagellates

                                  Vertical distribution of nutrients

                                  Libes 1992

                                  nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                  In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                  The silica cycle (global view)

                                  Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                  Biological fixation and bio-pump sinking

                                  Siliceous sediments

                                  Upwelling of silica rich water

                                  Enhanced Diatom growth

                                  ( Siliceous based productivity)

                                  River input

                                  The biological pumphellip Not only controls carbon but the nutrients including silica

                                  Silica Siliceous sediments

                                  The conveyor belt circulation

                                  And thermohaline circulation moves through the systemhellip

                                  Horizontal distribution of Silicate

                                  We see a dramatic difference in distribution between the Atlantic and the Pacific

                                  Emerson and Hedges (2008)

                                  Silica the upwelling nutrient

                                  Silicate (H2SiO4) Limits the growth of diatoms

                                  SiO2 (Silica) is an important nutrient only for diatoms

                                  Upwelling zones are areas with high diatom productivity because silica is plentiful

                                  This is because silica from deep water is upwelled there

                                  Coastal Upwelling zones in the world ocean

                                  Mann and Lazire

                                  Open ocean zones of upwelling hellip

                                  Mann and Lazire

                                  Distribution of siliceous sediments

                                  Distribution of siliceous sediments largely aligns with upwelling zones

                                  Silica cycling in an upwelling zone

                                  Dissolved silica is present in deep waters

                                  Silica is fixed in the mixed layer

                                  Silica upwells

                                  1

                                  2

                                  34Diatoms die and the

                                  silica tests sink to the sediments while dissolving and may begin to release SiO2

                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                  This replenishes the SiO2 content of the water locally and can enhance its silica content

                                  Silica cycling in a coastal upwelling zone

                                  Dissolved silica is present in deep waters

                                  Silica is fixed in the mixed layer

                                  Silica upwells

                                  1

                                  2

                                  34

                                  Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                  This replenishes the SiO2 content of the water and can enhance its silica content

                                  Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                  Diatoms - plants

                                  Cell walls are composed of silicon (Si)- essentially glass

                                  Fixed this lecture

                                  bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                  goes logically through global and then to local coastal upwelling rather than back and forth

                                  • Nutrients their cycling and upwelling
                                  • Biolimiting constituents (aka nutrients)
                                  • Vertical distribution of nutrients
                                  • Slide Number 4
                                  • Light and nutrients determine where the productivity is
                                  • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                  • Productivity follows the nutrient availability
                                  • Oligotrophic ocean
                                  • New versus regenerated production
                                  • Cycling of nitrogen in the ocean
                                  • Nitrogen limitation and low oxygen
                                  • The simple Nitrogen cycle
                                  • Different oxidation states of nitrogen
                                  • The Nitrogen cycle- reality
                                  • Annual Stratification sequence
                                  • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                  • Cycling of nitrogen in the ocean
                                  • The Nitrogen cyclehellip when things get tough
                                  • Low oxygen and the ldquospoilersrdquo
                                  • The Nitrogen cyclehellip the spoilers
                                  • The Nitrogen cyclehellip the whole story
                                  • The Marine nitrogen cycle
                                  • The Eutrophic ocean
                                  • Vertical distribution of nutrients
                                  • Hydrocast gear
                                  • Deploying the CTD
                                  • Rigging the bottles
                                  • Water sampling
                                  • Drawing samples from the bottles
                                  • Processing the samples
                                  • Slide Number 31
                                  • Silica the upwelling nutrient
                                  • Slide Number 33
                                  • Vertical distribution of nutrients
                                  • The silica cycle (global view)
                                  • The biological pumphellip
                                  • The conveyor belt circulation
                                  • Slide Number 38
                                  • Silica the upwelling nutrient
                                  • Coastal Upwelling zones in the world ocean
                                  • Open ocean zones of upwelling hellip
                                  • Distribution of siliceous sediments
                                  • Silica cycling in an upwelling zone
                                  • Silica cycling in a coastal upwelling zone
                                  • Slide Number 45
                                  • Slide Number 46
                                  • Fixed this lecture

                                    The Nitrogen cyclehellip when things get tough

                                    Anaerobic Energy intensiveThe spoilers The saviors

                                    You see the other half of the cycle

                                    Low oxygen and the

                                    ldquospoilersrdquo ΣCO2

                                    The Nitrogen cyclehellip the spoilers

                                    Anaerobic respiration

                                    +V

                                    +III -III

                                    0

                                    -III

                                    Lost to the system

                                    The Nitrogen cyclehellip the whole story

                                    Anaerobic respiration

                                    Energy intensive

                                    +V

                                    +III -III

                                    0

                                    -III

                                    Lost to the system Input to the

                                    system

                                    Input to the system

                                    The Marine nitrogen cycleAerobic versus anaerobic

                                    The Eutrophic ocean

                                    bull In the open ocean upwelling is the eutrophicendmember

                                    bull The ecosystem is different and so is the controlling nutrient

                                    Vertical distribution of nutrients

                                    Libes 1992

                                    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                    nutrients become fully depleted during stratification

                                    Hydrocast gear

                                    Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                    Deploying the CTD

                                    CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                    CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                    Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                    Rigging the bottles

                                    Water sampling

                                    Drawing samples from the bottles

                                    Processing the samples

                                    Silica the upwelling nutrient

                                    Silicate (H2SiO4) Limits the growth of diatoms

                                    SiO2 (Silica) is an important nutrient only for diatoms

                                    Siliceous plankton make siliceous oozesDiatoms

                                    Shells are composed of silicon (Si)- (glass)

                                    Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                    silicoflagellates

                                    Vertical distribution of nutrients

                                    Libes 1992

                                    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                    In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                    The silica cycle (global view)

                                    Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                    Biological fixation and bio-pump sinking

                                    Siliceous sediments

                                    Upwelling of silica rich water

                                    Enhanced Diatom growth

                                    ( Siliceous based productivity)

                                    River input

                                    The biological pumphellip Not only controls carbon but the nutrients including silica

                                    Silica Siliceous sediments

                                    The conveyor belt circulation

                                    And thermohaline circulation moves through the systemhellip

                                    Horizontal distribution of Silicate

                                    We see a dramatic difference in distribution between the Atlantic and the Pacific

                                    Emerson and Hedges (2008)

                                    Silica the upwelling nutrient

                                    Silicate (H2SiO4) Limits the growth of diatoms

                                    SiO2 (Silica) is an important nutrient only for diatoms

                                    Upwelling zones are areas with high diatom productivity because silica is plentiful

                                    This is because silica from deep water is upwelled there

                                    Coastal Upwelling zones in the world ocean

                                    Mann and Lazire

                                    Open ocean zones of upwelling hellip

                                    Mann and Lazire

                                    Distribution of siliceous sediments

                                    Distribution of siliceous sediments largely aligns with upwelling zones

                                    Silica cycling in an upwelling zone

                                    Dissolved silica is present in deep waters

                                    Silica is fixed in the mixed layer

                                    Silica upwells

                                    1

                                    2

                                    34Diatoms die and the

                                    silica tests sink to the sediments while dissolving and may begin to release SiO2

                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                    This replenishes the SiO2 content of the water locally and can enhance its silica content

                                    Silica cycling in a coastal upwelling zone

                                    Dissolved silica is present in deep waters

                                    Silica is fixed in the mixed layer

                                    Silica upwells

                                    1

                                    2

                                    34

                                    Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                    This replenishes the SiO2 content of the water and can enhance its silica content

                                    Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                    Diatoms - plants

                                    Cell walls are composed of silicon (Si)- essentially glass

                                    Fixed this lecture

                                    bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                    goes logically through global and then to local coastal upwelling rather than back and forth

                                    • Nutrients their cycling and upwelling
                                    • Biolimiting constituents (aka nutrients)
                                    • Vertical distribution of nutrients
                                    • Slide Number 4
                                    • Light and nutrients determine where the productivity is
                                    • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                    • Productivity follows the nutrient availability
                                    • Oligotrophic ocean
                                    • New versus regenerated production
                                    • Cycling of nitrogen in the ocean
                                    • Nitrogen limitation and low oxygen
                                    • The simple Nitrogen cycle
                                    • Different oxidation states of nitrogen
                                    • The Nitrogen cycle- reality
                                    • Annual Stratification sequence
                                    • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                    • Cycling of nitrogen in the ocean
                                    • The Nitrogen cyclehellip when things get tough
                                    • Low oxygen and the ldquospoilersrdquo
                                    • The Nitrogen cyclehellip the spoilers
                                    • The Nitrogen cyclehellip the whole story
                                    • The Marine nitrogen cycle
                                    • The Eutrophic ocean
                                    • Vertical distribution of nutrients
                                    • Hydrocast gear
                                    • Deploying the CTD
                                    • Rigging the bottles
                                    • Water sampling
                                    • Drawing samples from the bottles
                                    • Processing the samples
                                    • Slide Number 31
                                    • Silica the upwelling nutrient
                                    • Slide Number 33
                                    • Vertical distribution of nutrients
                                    • The silica cycle (global view)
                                    • The biological pumphellip
                                    • The conveyor belt circulation
                                    • Slide Number 38
                                    • Silica the upwelling nutrient
                                    • Coastal Upwelling zones in the world ocean
                                    • Open ocean zones of upwelling hellip
                                    • Distribution of siliceous sediments
                                    • Silica cycling in an upwelling zone
                                    • Silica cycling in a coastal upwelling zone
                                    • Slide Number 45
                                    • Slide Number 46
                                    • Fixed this lecture

                                      Low oxygen and the

                                      ldquospoilersrdquo ΣCO2

                                      The Nitrogen cyclehellip the spoilers

                                      Anaerobic respiration

                                      +V

                                      +III -III

                                      0

                                      -III

                                      Lost to the system

                                      The Nitrogen cyclehellip the whole story

                                      Anaerobic respiration

                                      Energy intensive

                                      +V

                                      +III -III

                                      0

                                      -III

                                      Lost to the system Input to the

                                      system

                                      Input to the system

                                      The Marine nitrogen cycleAerobic versus anaerobic

                                      The Eutrophic ocean

                                      bull In the open ocean upwelling is the eutrophicendmember

                                      bull The ecosystem is different and so is the controlling nutrient

                                      Vertical distribution of nutrients

                                      Libes 1992

                                      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                      nutrients become fully depleted during stratification

                                      Hydrocast gear

                                      Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                      Deploying the CTD

                                      CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                      CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                      Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                      Rigging the bottles

                                      Water sampling

                                      Drawing samples from the bottles

                                      Processing the samples

                                      Silica the upwelling nutrient

                                      Silicate (H2SiO4) Limits the growth of diatoms

                                      SiO2 (Silica) is an important nutrient only for diatoms

                                      Siliceous plankton make siliceous oozesDiatoms

                                      Shells are composed of silicon (Si)- (glass)

                                      Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                      silicoflagellates

                                      Vertical distribution of nutrients

                                      Libes 1992

                                      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                      In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                      The silica cycle (global view)

                                      Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                      Biological fixation and bio-pump sinking

                                      Siliceous sediments

                                      Upwelling of silica rich water

                                      Enhanced Diatom growth

                                      ( Siliceous based productivity)

                                      River input

                                      The biological pumphellip Not only controls carbon but the nutrients including silica

                                      Silica Siliceous sediments

                                      The conveyor belt circulation

                                      And thermohaline circulation moves through the systemhellip

                                      Horizontal distribution of Silicate

                                      We see a dramatic difference in distribution between the Atlantic and the Pacific

                                      Emerson and Hedges (2008)

                                      Silica the upwelling nutrient

                                      Silicate (H2SiO4) Limits the growth of diatoms

                                      SiO2 (Silica) is an important nutrient only for diatoms

                                      Upwelling zones are areas with high diatom productivity because silica is plentiful

                                      This is because silica from deep water is upwelled there

                                      Coastal Upwelling zones in the world ocean

                                      Mann and Lazire

                                      Open ocean zones of upwelling hellip

                                      Mann and Lazire

                                      Distribution of siliceous sediments

                                      Distribution of siliceous sediments largely aligns with upwelling zones

                                      Silica cycling in an upwelling zone

                                      Dissolved silica is present in deep waters

                                      Silica is fixed in the mixed layer

                                      Silica upwells

                                      1

                                      2

                                      34Diatoms die and the

                                      silica tests sink to the sediments while dissolving and may begin to release SiO2

                                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                      This replenishes the SiO2 content of the water locally and can enhance its silica content

                                      Silica cycling in a coastal upwelling zone

                                      Dissolved silica is present in deep waters

                                      Silica is fixed in the mixed layer

                                      Silica upwells

                                      1

                                      2

                                      34

                                      Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                      This replenishes the SiO2 content of the water and can enhance its silica content

                                      Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                      Diatoms - plants

                                      Cell walls are composed of silicon (Si)- essentially glass

                                      Fixed this lecture

                                      bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                      goes logically through global and then to local coastal upwelling rather than back and forth

                                      • Nutrients their cycling and upwelling
                                      • Biolimiting constituents (aka nutrients)
                                      • Vertical distribution of nutrients
                                      • Slide Number 4
                                      • Light and nutrients determine where the productivity is
                                      • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                      • Productivity follows the nutrient availability
                                      • Oligotrophic ocean
                                      • New versus regenerated production
                                      • Cycling of nitrogen in the ocean
                                      • Nitrogen limitation and low oxygen
                                      • The simple Nitrogen cycle
                                      • Different oxidation states of nitrogen
                                      • The Nitrogen cycle- reality
                                      • Annual Stratification sequence
                                      • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                      • Cycling of nitrogen in the ocean
                                      • The Nitrogen cyclehellip when things get tough
                                      • Low oxygen and the ldquospoilersrdquo
                                      • The Nitrogen cyclehellip the spoilers
                                      • The Nitrogen cyclehellip the whole story
                                      • The Marine nitrogen cycle
                                      • The Eutrophic ocean
                                      • Vertical distribution of nutrients
                                      • Hydrocast gear
                                      • Deploying the CTD
                                      • Rigging the bottles
                                      • Water sampling
                                      • Drawing samples from the bottles
                                      • Processing the samples
                                      • Slide Number 31
                                      • Silica the upwelling nutrient
                                      • Slide Number 33
                                      • Vertical distribution of nutrients
                                      • The silica cycle (global view)
                                      • The biological pumphellip
                                      • The conveyor belt circulation
                                      • Slide Number 38
                                      • Silica the upwelling nutrient
                                      • Coastal Upwelling zones in the world ocean
                                      • Open ocean zones of upwelling hellip
                                      • Distribution of siliceous sediments
                                      • Silica cycling in an upwelling zone
                                      • Silica cycling in a coastal upwelling zone
                                      • Slide Number 45
                                      • Slide Number 46
                                      • Fixed this lecture

                                        The Nitrogen cyclehellip the spoilers

                                        Anaerobic respiration

                                        +V

                                        +III -III

                                        0

                                        -III

                                        Lost to the system

                                        The Nitrogen cyclehellip the whole story

                                        Anaerobic respiration

                                        Energy intensive

                                        +V

                                        +III -III

                                        0

                                        -III

                                        Lost to the system Input to the

                                        system

                                        Input to the system

                                        The Marine nitrogen cycleAerobic versus anaerobic

                                        The Eutrophic ocean

                                        bull In the open ocean upwelling is the eutrophicendmember

                                        bull The ecosystem is different and so is the controlling nutrient

                                        Vertical distribution of nutrients

                                        Libes 1992

                                        nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                        nutrients become fully depleted during stratification

                                        Hydrocast gear

                                        Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                        Deploying the CTD

                                        CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                        CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                        Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                        Rigging the bottles

                                        Water sampling

                                        Drawing samples from the bottles

                                        Processing the samples

                                        Silica the upwelling nutrient

                                        Silicate (H2SiO4) Limits the growth of diatoms

                                        SiO2 (Silica) is an important nutrient only for diatoms

                                        Siliceous plankton make siliceous oozesDiatoms

                                        Shells are composed of silicon (Si)- (glass)

                                        Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                        silicoflagellates

                                        Vertical distribution of nutrients

                                        Libes 1992

                                        nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                        In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                        The silica cycle (global view)

                                        Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                        Biological fixation and bio-pump sinking

                                        Siliceous sediments

                                        Upwelling of silica rich water

                                        Enhanced Diatom growth

                                        ( Siliceous based productivity)

                                        River input

                                        The biological pumphellip Not only controls carbon but the nutrients including silica

                                        Silica Siliceous sediments

                                        The conveyor belt circulation

                                        And thermohaline circulation moves through the systemhellip

                                        Horizontal distribution of Silicate

                                        We see a dramatic difference in distribution between the Atlantic and the Pacific

                                        Emerson and Hedges (2008)

                                        Silica the upwelling nutrient

                                        Silicate (H2SiO4) Limits the growth of diatoms

                                        SiO2 (Silica) is an important nutrient only for diatoms

                                        Upwelling zones are areas with high diatom productivity because silica is plentiful

                                        This is because silica from deep water is upwelled there

                                        Coastal Upwelling zones in the world ocean

                                        Mann and Lazire

                                        Open ocean zones of upwelling hellip

                                        Mann and Lazire

                                        Distribution of siliceous sediments

                                        Distribution of siliceous sediments largely aligns with upwelling zones

                                        Silica cycling in an upwelling zone

                                        Dissolved silica is present in deep waters

                                        Silica is fixed in the mixed layer

                                        Silica upwells

                                        1

                                        2

                                        34Diatoms die and the

                                        silica tests sink to the sediments while dissolving and may begin to release SiO2

                                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                        This replenishes the SiO2 content of the water locally and can enhance its silica content

                                        Silica cycling in a coastal upwelling zone

                                        Dissolved silica is present in deep waters

                                        Silica is fixed in the mixed layer

                                        Silica upwells

                                        1

                                        2

                                        34

                                        Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                        This replenishes the SiO2 content of the water and can enhance its silica content

                                        Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                        Diatoms - plants

                                        Cell walls are composed of silicon (Si)- essentially glass

                                        Fixed this lecture

                                        bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                        goes logically through global and then to local coastal upwelling rather than back and forth

                                        • Nutrients their cycling and upwelling
                                        • Biolimiting constituents (aka nutrients)
                                        • Vertical distribution of nutrients
                                        • Slide Number 4
                                        • Light and nutrients determine where the productivity is
                                        • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                        • Productivity follows the nutrient availability
                                        • Oligotrophic ocean
                                        • New versus regenerated production
                                        • Cycling of nitrogen in the ocean
                                        • Nitrogen limitation and low oxygen
                                        • The simple Nitrogen cycle
                                        • Different oxidation states of nitrogen
                                        • The Nitrogen cycle- reality
                                        • Annual Stratification sequence
                                        • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                        • Cycling of nitrogen in the ocean
                                        • The Nitrogen cyclehellip when things get tough
                                        • Low oxygen and the ldquospoilersrdquo
                                        • The Nitrogen cyclehellip the spoilers
                                        • The Nitrogen cyclehellip the whole story
                                        • The Marine nitrogen cycle
                                        • The Eutrophic ocean
                                        • Vertical distribution of nutrients
                                        • Hydrocast gear
                                        • Deploying the CTD
                                        • Rigging the bottles
                                        • Water sampling
                                        • Drawing samples from the bottles
                                        • Processing the samples
                                        • Slide Number 31
                                        • Silica the upwelling nutrient
                                        • Slide Number 33
                                        • Vertical distribution of nutrients
                                        • The silica cycle (global view)
                                        • The biological pumphellip
                                        • The conveyor belt circulation
                                        • Slide Number 38
                                        • Silica the upwelling nutrient
                                        • Coastal Upwelling zones in the world ocean
                                        • Open ocean zones of upwelling hellip
                                        • Distribution of siliceous sediments
                                        • Silica cycling in an upwelling zone
                                        • Silica cycling in a coastal upwelling zone
                                        • Slide Number 45
                                        • Slide Number 46
                                        • Fixed this lecture

                                          The Nitrogen cyclehellip the whole story

                                          Anaerobic respiration

                                          Energy intensive

                                          +V

                                          +III -III

                                          0

                                          -III

                                          Lost to the system Input to the

                                          system

                                          Input to the system

                                          The Marine nitrogen cycleAerobic versus anaerobic

                                          The Eutrophic ocean

                                          bull In the open ocean upwelling is the eutrophicendmember

                                          bull The ecosystem is different and so is the controlling nutrient

                                          Vertical distribution of nutrients

                                          Libes 1992

                                          nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                          nutrients become fully depleted during stratification

                                          Hydrocast gear

                                          Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                          Deploying the CTD

                                          CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                          CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                          Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                          Rigging the bottles

                                          Water sampling

                                          Drawing samples from the bottles

                                          Processing the samples

                                          Silica the upwelling nutrient

                                          Silicate (H2SiO4) Limits the growth of diatoms

                                          SiO2 (Silica) is an important nutrient only for diatoms

                                          Siliceous plankton make siliceous oozesDiatoms

                                          Shells are composed of silicon (Si)- (glass)

                                          Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                          silicoflagellates

                                          Vertical distribution of nutrients

                                          Libes 1992

                                          nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                          In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                          The silica cycle (global view)

                                          Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                          Biological fixation and bio-pump sinking

                                          Siliceous sediments

                                          Upwelling of silica rich water

                                          Enhanced Diatom growth

                                          ( Siliceous based productivity)

                                          River input

                                          The biological pumphellip Not only controls carbon but the nutrients including silica

                                          Silica Siliceous sediments

                                          The conveyor belt circulation

                                          And thermohaline circulation moves through the systemhellip

                                          Horizontal distribution of Silicate

                                          We see a dramatic difference in distribution between the Atlantic and the Pacific

                                          Emerson and Hedges (2008)

                                          Silica the upwelling nutrient

                                          Silicate (H2SiO4) Limits the growth of diatoms

                                          SiO2 (Silica) is an important nutrient only for diatoms

                                          Upwelling zones are areas with high diatom productivity because silica is plentiful

                                          This is because silica from deep water is upwelled there

                                          Coastal Upwelling zones in the world ocean

                                          Mann and Lazire

                                          Open ocean zones of upwelling hellip

                                          Mann and Lazire

                                          Distribution of siliceous sediments

                                          Distribution of siliceous sediments largely aligns with upwelling zones

                                          Silica cycling in an upwelling zone

                                          Dissolved silica is present in deep waters

                                          Silica is fixed in the mixed layer

                                          Silica upwells

                                          1

                                          2

                                          34Diatoms die and the

                                          silica tests sink to the sediments while dissolving and may begin to release SiO2

                                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                          This replenishes the SiO2 content of the water locally and can enhance its silica content

                                          Silica cycling in a coastal upwelling zone

                                          Dissolved silica is present in deep waters

                                          Silica is fixed in the mixed layer

                                          Silica upwells

                                          1

                                          2

                                          34

                                          Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                          This replenishes the SiO2 content of the water and can enhance its silica content

                                          Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                          Diatoms - plants

                                          Cell walls are composed of silicon (Si)- essentially glass

                                          Fixed this lecture

                                          bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                          goes logically through global and then to local coastal upwelling rather than back and forth

                                          • Nutrients their cycling and upwelling
                                          • Biolimiting constituents (aka nutrients)
                                          • Vertical distribution of nutrients
                                          • Slide Number 4
                                          • Light and nutrients determine where the productivity is
                                          • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                          • Productivity follows the nutrient availability
                                          • Oligotrophic ocean
                                          • New versus regenerated production
                                          • Cycling of nitrogen in the ocean
                                          • Nitrogen limitation and low oxygen
                                          • The simple Nitrogen cycle
                                          • Different oxidation states of nitrogen
                                          • The Nitrogen cycle- reality
                                          • Annual Stratification sequence
                                          • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                          • Cycling of nitrogen in the ocean
                                          • The Nitrogen cyclehellip when things get tough
                                          • Low oxygen and the ldquospoilersrdquo
                                          • The Nitrogen cyclehellip the spoilers
                                          • The Nitrogen cyclehellip the whole story
                                          • The Marine nitrogen cycle
                                          • The Eutrophic ocean
                                          • Vertical distribution of nutrients
                                          • Hydrocast gear
                                          • Deploying the CTD
                                          • Rigging the bottles
                                          • Water sampling
                                          • Drawing samples from the bottles
                                          • Processing the samples
                                          • Slide Number 31
                                          • Silica the upwelling nutrient
                                          • Slide Number 33
                                          • Vertical distribution of nutrients
                                          • The silica cycle (global view)
                                          • The biological pumphellip
                                          • The conveyor belt circulation
                                          • Slide Number 38
                                          • Silica the upwelling nutrient
                                          • Coastal Upwelling zones in the world ocean
                                          • Open ocean zones of upwelling hellip
                                          • Distribution of siliceous sediments
                                          • Silica cycling in an upwelling zone
                                          • Silica cycling in a coastal upwelling zone
                                          • Slide Number 45
                                          • Slide Number 46
                                          • Fixed this lecture

                                            The Marine nitrogen cycleAerobic versus anaerobic

                                            The Eutrophic ocean

                                            bull In the open ocean upwelling is the eutrophicendmember

                                            bull The ecosystem is different and so is the controlling nutrient

                                            Vertical distribution of nutrients

                                            Libes 1992

                                            nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                            nutrients become fully depleted during stratification

                                            Hydrocast gear

                                            Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                            Deploying the CTD

                                            CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                            CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                            Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                            Rigging the bottles

                                            Water sampling

                                            Drawing samples from the bottles

                                            Processing the samples

                                            Silica the upwelling nutrient

                                            Silicate (H2SiO4) Limits the growth of diatoms

                                            SiO2 (Silica) is an important nutrient only for diatoms

                                            Siliceous plankton make siliceous oozesDiatoms

                                            Shells are composed of silicon (Si)- (glass)

                                            Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                            silicoflagellates

                                            Vertical distribution of nutrients

                                            Libes 1992

                                            nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                            In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                            The silica cycle (global view)

                                            Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                            Biological fixation and bio-pump sinking

                                            Siliceous sediments

                                            Upwelling of silica rich water

                                            Enhanced Diatom growth

                                            ( Siliceous based productivity)

                                            River input

                                            The biological pumphellip Not only controls carbon but the nutrients including silica

                                            Silica Siliceous sediments

                                            The conveyor belt circulation

                                            And thermohaline circulation moves through the systemhellip

                                            Horizontal distribution of Silicate

                                            We see a dramatic difference in distribution between the Atlantic and the Pacific

                                            Emerson and Hedges (2008)

                                            Silica the upwelling nutrient

                                            Silicate (H2SiO4) Limits the growth of diatoms

                                            SiO2 (Silica) is an important nutrient only for diatoms

                                            Upwelling zones are areas with high diatom productivity because silica is plentiful

                                            This is because silica from deep water is upwelled there

                                            Coastal Upwelling zones in the world ocean

                                            Mann and Lazire

                                            Open ocean zones of upwelling hellip

                                            Mann and Lazire

                                            Distribution of siliceous sediments

                                            Distribution of siliceous sediments largely aligns with upwelling zones

                                            Silica cycling in an upwelling zone

                                            Dissolved silica is present in deep waters

                                            Silica is fixed in the mixed layer

                                            Silica upwells

                                            1

                                            2

                                            34Diatoms die and the

                                            silica tests sink to the sediments while dissolving and may begin to release SiO2

                                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                            This replenishes the SiO2 content of the water locally and can enhance its silica content

                                            Silica cycling in a coastal upwelling zone

                                            Dissolved silica is present in deep waters

                                            Silica is fixed in the mixed layer

                                            Silica upwells

                                            1

                                            2

                                            34

                                            Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                            This replenishes the SiO2 content of the water and can enhance its silica content

                                            Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                            Diatoms - plants

                                            Cell walls are composed of silicon (Si)- essentially glass

                                            Fixed this lecture

                                            bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                            goes logically through global and then to local coastal upwelling rather than back and forth

                                            • Nutrients their cycling and upwelling
                                            • Biolimiting constituents (aka nutrients)
                                            • Vertical distribution of nutrients
                                            • Slide Number 4
                                            • Light and nutrients determine where the productivity is
                                            • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                            • Productivity follows the nutrient availability
                                            • Oligotrophic ocean
                                            • New versus regenerated production
                                            • Cycling of nitrogen in the ocean
                                            • Nitrogen limitation and low oxygen
                                            • The simple Nitrogen cycle
                                            • Different oxidation states of nitrogen
                                            • The Nitrogen cycle- reality
                                            • Annual Stratification sequence
                                            • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                            • Cycling of nitrogen in the ocean
                                            • The Nitrogen cyclehellip when things get tough
                                            • Low oxygen and the ldquospoilersrdquo
                                            • The Nitrogen cyclehellip the spoilers
                                            • The Nitrogen cyclehellip the whole story
                                            • The Marine nitrogen cycle
                                            • The Eutrophic ocean
                                            • Vertical distribution of nutrients
                                            • Hydrocast gear
                                            • Deploying the CTD
                                            • Rigging the bottles
                                            • Water sampling
                                            • Drawing samples from the bottles
                                            • Processing the samples
                                            • Slide Number 31
                                            • Silica the upwelling nutrient
                                            • Slide Number 33
                                            • Vertical distribution of nutrients
                                            • The silica cycle (global view)
                                            • The biological pumphellip
                                            • The conveyor belt circulation
                                            • Slide Number 38
                                            • Silica the upwelling nutrient
                                            • Coastal Upwelling zones in the world ocean
                                            • Open ocean zones of upwelling hellip
                                            • Distribution of siliceous sediments
                                            • Silica cycling in an upwelling zone
                                            • Silica cycling in a coastal upwelling zone
                                            • Slide Number 45
                                            • Slide Number 46
                                            • Fixed this lecture

                                              The Eutrophic ocean

                                              bull In the open ocean upwelling is the eutrophicendmember

                                              bull The ecosystem is different and so is the controlling nutrient

                                              Vertical distribution of nutrients

                                              Libes 1992

                                              nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                              nutrients become fully depleted during stratification

                                              Hydrocast gear

                                              Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                              Deploying the CTD

                                              CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                              CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                              Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                              Rigging the bottles

                                              Water sampling

                                              Drawing samples from the bottles

                                              Processing the samples

                                              Silica the upwelling nutrient

                                              Silicate (H2SiO4) Limits the growth of diatoms

                                              SiO2 (Silica) is an important nutrient only for diatoms

                                              Siliceous plankton make siliceous oozesDiatoms

                                              Shells are composed of silicon (Si)- (glass)

                                              Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                              silicoflagellates

                                              Vertical distribution of nutrients

                                              Libes 1992

                                              nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                              In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                              The silica cycle (global view)

                                              Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                              Biological fixation and bio-pump sinking

                                              Siliceous sediments

                                              Upwelling of silica rich water

                                              Enhanced Diatom growth

                                              ( Siliceous based productivity)

                                              River input

                                              The biological pumphellip Not only controls carbon but the nutrients including silica

                                              Silica Siliceous sediments

                                              The conveyor belt circulation

                                              And thermohaline circulation moves through the systemhellip

                                              Horizontal distribution of Silicate

                                              We see a dramatic difference in distribution between the Atlantic and the Pacific

                                              Emerson and Hedges (2008)

                                              Silica the upwelling nutrient

                                              Silicate (H2SiO4) Limits the growth of diatoms

                                              SiO2 (Silica) is an important nutrient only for diatoms

                                              Upwelling zones are areas with high diatom productivity because silica is plentiful

                                              This is because silica from deep water is upwelled there

                                              Coastal Upwelling zones in the world ocean

                                              Mann and Lazire

                                              Open ocean zones of upwelling hellip

                                              Mann and Lazire

                                              Distribution of siliceous sediments

                                              Distribution of siliceous sediments largely aligns with upwelling zones

                                              Silica cycling in an upwelling zone

                                              Dissolved silica is present in deep waters

                                              Silica is fixed in the mixed layer

                                              Silica upwells

                                              1

                                              2

                                              34Diatoms die and the

                                              silica tests sink to the sediments while dissolving and may begin to release SiO2

                                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                              This replenishes the SiO2 content of the water locally and can enhance its silica content

                                              Silica cycling in a coastal upwelling zone

                                              Dissolved silica is present in deep waters

                                              Silica is fixed in the mixed layer

                                              Silica upwells

                                              1

                                              2

                                              34

                                              Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                              This replenishes the SiO2 content of the water and can enhance its silica content

                                              Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                              Diatoms - plants

                                              Cell walls are composed of silicon (Si)- essentially glass

                                              Fixed this lecture

                                              bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                              goes logically through global and then to local coastal upwelling rather than back and forth

                                              • Nutrients their cycling and upwelling
                                              • Biolimiting constituents (aka nutrients)
                                              • Vertical distribution of nutrients
                                              • Slide Number 4
                                              • Light and nutrients determine where the productivity is
                                              • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                              • Productivity follows the nutrient availability
                                              • Oligotrophic ocean
                                              • New versus regenerated production
                                              • Cycling of nitrogen in the ocean
                                              • Nitrogen limitation and low oxygen
                                              • The simple Nitrogen cycle
                                              • Different oxidation states of nitrogen
                                              • The Nitrogen cycle- reality
                                              • Annual Stratification sequence
                                              • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                              • Cycling of nitrogen in the ocean
                                              • The Nitrogen cyclehellip when things get tough
                                              • Low oxygen and the ldquospoilersrdquo
                                              • The Nitrogen cyclehellip the spoilers
                                              • The Nitrogen cyclehellip the whole story
                                              • The Marine nitrogen cycle
                                              • The Eutrophic ocean
                                              • Vertical distribution of nutrients
                                              • Hydrocast gear
                                              • Deploying the CTD
                                              • Rigging the bottles
                                              • Water sampling
                                              • Drawing samples from the bottles
                                              • Processing the samples
                                              • Slide Number 31
                                              • Silica the upwelling nutrient
                                              • Slide Number 33
                                              • Vertical distribution of nutrients
                                              • The silica cycle (global view)
                                              • The biological pumphellip
                                              • The conveyor belt circulation
                                              • Slide Number 38
                                              • Silica the upwelling nutrient
                                              • Coastal Upwelling zones in the world ocean
                                              • Open ocean zones of upwelling hellip
                                              • Distribution of siliceous sediments
                                              • Silica cycling in an upwelling zone
                                              • Silica cycling in a coastal upwelling zone
                                              • Slide Number 45
                                              • Slide Number 46
                                              • Fixed this lecture

                                                Vertical distribution of nutrients

                                                Libes 1992

                                                nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                nutrients become fully depleted during stratification

                                                Hydrocast gear

                                                Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                                Deploying the CTD

                                                CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                                CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                                Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                                Rigging the bottles

                                                Water sampling

                                                Drawing samples from the bottles

                                                Processing the samples

                                                Silica the upwelling nutrient

                                                Silicate (H2SiO4) Limits the growth of diatoms

                                                SiO2 (Silica) is an important nutrient only for diatoms

                                                Siliceous plankton make siliceous oozesDiatoms

                                                Shells are composed of silicon (Si)- (glass)

                                                Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                silicoflagellates

                                                Vertical distribution of nutrients

                                                Libes 1992

                                                nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                The silica cycle (global view)

                                                Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                Biological fixation and bio-pump sinking

                                                Siliceous sediments

                                                Upwelling of silica rich water

                                                Enhanced Diatom growth

                                                ( Siliceous based productivity)

                                                River input

                                                The biological pumphellip Not only controls carbon but the nutrients including silica

                                                Silica Siliceous sediments

                                                The conveyor belt circulation

                                                And thermohaline circulation moves through the systemhellip

                                                Horizontal distribution of Silicate

                                                We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                Emerson and Hedges (2008)

                                                Silica the upwelling nutrient

                                                Silicate (H2SiO4) Limits the growth of diatoms

                                                SiO2 (Silica) is an important nutrient only for diatoms

                                                Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                This is because silica from deep water is upwelled there

                                                Coastal Upwelling zones in the world ocean

                                                Mann and Lazire

                                                Open ocean zones of upwelling hellip

                                                Mann and Lazire

                                                Distribution of siliceous sediments

                                                Distribution of siliceous sediments largely aligns with upwelling zones

                                                Silica cycling in an upwelling zone

                                                Dissolved silica is present in deep waters

                                                Silica is fixed in the mixed layer

                                                Silica upwells

                                                1

                                                2

                                                34Diatoms die and the

                                                silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                Silica cycling in a coastal upwelling zone

                                                Dissolved silica is present in deep waters

                                                Silica is fixed in the mixed layer

                                                Silica upwells

                                                1

                                                2

                                                34

                                                Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                This replenishes the SiO2 content of the water and can enhance its silica content

                                                Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                Diatoms - plants

                                                Cell walls are composed of silicon (Si)- essentially glass

                                                Fixed this lecture

                                                bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                goes logically through global and then to local coastal upwelling rather than back and forth

                                                • Nutrients their cycling and upwelling
                                                • Biolimiting constituents (aka nutrients)
                                                • Vertical distribution of nutrients
                                                • Slide Number 4
                                                • Light and nutrients determine where the productivity is
                                                • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                • Productivity follows the nutrient availability
                                                • Oligotrophic ocean
                                                • New versus regenerated production
                                                • Cycling of nitrogen in the ocean
                                                • Nitrogen limitation and low oxygen
                                                • The simple Nitrogen cycle
                                                • Different oxidation states of nitrogen
                                                • The Nitrogen cycle- reality
                                                • Annual Stratification sequence
                                                • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                • Cycling of nitrogen in the ocean
                                                • The Nitrogen cyclehellip when things get tough
                                                • Low oxygen and the ldquospoilersrdquo
                                                • The Nitrogen cyclehellip the spoilers
                                                • The Nitrogen cyclehellip the whole story
                                                • The Marine nitrogen cycle
                                                • The Eutrophic ocean
                                                • Vertical distribution of nutrients
                                                • Hydrocast gear
                                                • Deploying the CTD
                                                • Rigging the bottles
                                                • Water sampling
                                                • Drawing samples from the bottles
                                                • Processing the samples
                                                • Slide Number 31
                                                • Silica the upwelling nutrient
                                                • Slide Number 33
                                                • Vertical distribution of nutrients
                                                • The silica cycle (global view)
                                                • The biological pumphellip
                                                • The conveyor belt circulation
                                                • Slide Number 38
                                                • Silica the upwelling nutrient
                                                • Coastal Upwelling zones in the world ocean
                                                • Open ocean zones of upwelling hellip
                                                • Distribution of siliceous sediments
                                                • Silica cycling in an upwelling zone
                                                • Silica cycling in a coastal upwelling zone
                                                • Slide Number 45
                                                • Slide Number 46
                                                • Fixed this lecture

                                                  Hydrocast gear

                                                  Niskin bottle ldquorosetterdquo with 36 bottles for collecting sub-surface water

                                                  Deploying the CTD

                                                  CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                                  CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                                  Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                                  Rigging the bottles

                                                  Water sampling

                                                  Drawing samples from the bottles

                                                  Processing the samples

                                                  Silica the upwelling nutrient

                                                  Silicate (H2SiO4) Limits the growth of diatoms

                                                  SiO2 (Silica) is an important nutrient only for diatoms

                                                  Siliceous plankton make siliceous oozesDiatoms

                                                  Shells are composed of silicon (Si)- (glass)

                                                  Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                  silicoflagellates

                                                  Vertical distribution of nutrients

                                                  Libes 1992

                                                  nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                  In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                  The silica cycle (global view)

                                                  Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                  Biological fixation and bio-pump sinking

                                                  Siliceous sediments

                                                  Upwelling of silica rich water

                                                  Enhanced Diatom growth

                                                  ( Siliceous based productivity)

                                                  River input

                                                  The biological pumphellip Not only controls carbon but the nutrients including silica

                                                  Silica Siliceous sediments

                                                  The conveyor belt circulation

                                                  And thermohaline circulation moves through the systemhellip

                                                  Horizontal distribution of Silicate

                                                  We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                  Emerson and Hedges (2008)

                                                  Silica the upwelling nutrient

                                                  Silicate (H2SiO4) Limits the growth of diatoms

                                                  SiO2 (Silica) is an important nutrient only for diatoms

                                                  Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                  This is because silica from deep water is upwelled there

                                                  Coastal Upwelling zones in the world ocean

                                                  Mann and Lazire

                                                  Open ocean zones of upwelling hellip

                                                  Mann and Lazire

                                                  Distribution of siliceous sediments

                                                  Distribution of siliceous sediments largely aligns with upwelling zones

                                                  Silica cycling in an upwelling zone

                                                  Dissolved silica is present in deep waters

                                                  Silica is fixed in the mixed layer

                                                  Silica upwells

                                                  1

                                                  2

                                                  34Diatoms die and the

                                                  silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                  This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                  Silica cycling in a coastal upwelling zone

                                                  Dissolved silica is present in deep waters

                                                  Silica is fixed in the mixed layer

                                                  Silica upwells

                                                  1

                                                  2

                                                  34

                                                  Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                  This replenishes the SiO2 content of the water and can enhance its silica content

                                                  Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                  Diatoms - plants

                                                  Cell walls are composed of silicon (Si)- essentially glass

                                                  Fixed this lecture

                                                  bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                  goes logically through global and then to local coastal upwelling rather than back and forth

                                                  • Nutrients their cycling and upwelling
                                                  • Biolimiting constituents (aka nutrients)
                                                  • Vertical distribution of nutrients
                                                  • Slide Number 4
                                                  • Light and nutrients determine where the productivity is
                                                  • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                  • Productivity follows the nutrient availability
                                                  • Oligotrophic ocean
                                                  • New versus regenerated production
                                                  • Cycling of nitrogen in the ocean
                                                  • Nitrogen limitation and low oxygen
                                                  • The simple Nitrogen cycle
                                                  • Different oxidation states of nitrogen
                                                  • The Nitrogen cycle- reality
                                                  • Annual Stratification sequence
                                                  • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                  • Cycling of nitrogen in the ocean
                                                  • The Nitrogen cyclehellip when things get tough
                                                  • Low oxygen and the ldquospoilersrdquo
                                                  • The Nitrogen cyclehellip the spoilers
                                                  • The Nitrogen cyclehellip the whole story
                                                  • The Marine nitrogen cycle
                                                  • The Eutrophic ocean
                                                  • Vertical distribution of nutrients
                                                  • Hydrocast gear
                                                  • Deploying the CTD
                                                  • Rigging the bottles
                                                  • Water sampling
                                                  • Drawing samples from the bottles
                                                  • Processing the samples
                                                  • Slide Number 31
                                                  • Silica the upwelling nutrient
                                                  • Slide Number 33
                                                  • Vertical distribution of nutrients
                                                  • The silica cycle (global view)
                                                  • The biological pumphellip
                                                  • The conveyor belt circulation
                                                  • Slide Number 38
                                                  • Silica the upwelling nutrient
                                                  • Coastal Upwelling zones in the world ocean
                                                  • Open ocean zones of upwelling hellip
                                                  • Distribution of siliceous sediments
                                                  • Silica cycling in an upwelling zone
                                                  • Silica cycling in a coastal upwelling zone
                                                  • Slide Number 45
                                                  • Slide Number 46
                                                  • Fixed this lecture

                                                    Deploying the CTD

                                                    CTD preparation and deployment at nighthttpswwwyoutubecomwatchv=wO_Dh97v4QM

                                                    CTD Rosette System Deployment and Retrievalhttpswwwyoutubecomwatchv=f_SHCc5Ton4

                                                    Underwater view of a CTD casthttpswwwyoutubecomwatchv=LEn2qxSrPm0

                                                    Rigging the bottles

                                                    Water sampling

                                                    Drawing samples from the bottles

                                                    Processing the samples

                                                    Silica the upwelling nutrient

                                                    Silicate (H2SiO4) Limits the growth of diatoms

                                                    SiO2 (Silica) is an important nutrient only for diatoms

                                                    Siliceous plankton make siliceous oozesDiatoms

                                                    Shells are composed of silicon (Si)- (glass)

                                                    Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                    silicoflagellates

                                                    Vertical distribution of nutrients

                                                    Libes 1992

                                                    nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                    In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                    The silica cycle (global view)

                                                    Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                    Biological fixation and bio-pump sinking

                                                    Siliceous sediments

                                                    Upwelling of silica rich water

                                                    Enhanced Diatom growth

                                                    ( Siliceous based productivity)

                                                    River input

                                                    The biological pumphellip Not only controls carbon but the nutrients including silica

                                                    Silica Siliceous sediments

                                                    The conveyor belt circulation

                                                    And thermohaline circulation moves through the systemhellip

                                                    Horizontal distribution of Silicate

                                                    We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                    Emerson and Hedges (2008)

                                                    Silica the upwelling nutrient

                                                    Silicate (H2SiO4) Limits the growth of diatoms

                                                    SiO2 (Silica) is an important nutrient only for diatoms

                                                    Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                    This is because silica from deep water is upwelled there

                                                    Coastal Upwelling zones in the world ocean

                                                    Mann and Lazire

                                                    Open ocean zones of upwelling hellip

                                                    Mann and Lazire

                                                    Distribution of siliceous sediments

                                                    Distribution of siliceous sediments largely aligns with upwelling zones

                                                    Silica cycling in an upwelling zone

                                                    Dissolved silica is present in deep waters

                                                    Silica is fixed in the mixed layer

                                                    Silica upwells

                                                    1

                                                    2

                                                    34Diatoms die and the

                                                    silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                    This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                    Silica cycling in a coastal upwelling zone

                                                    Dissolved silica is present in deep waters

                                                    Silica is fixed in the mixed layer

                                                    Silica upwells

                                                    1

                                                    2

                                                    34

                                                    Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                    This replenishes the SiO2 content of the water and can enhance its silica content

                                                    Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                    Diatoms - plants

                                                    Cell walls are composed of silicon (Si)- essentially glass

                                                    Fixed this lecture

                                                    bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                    goes logically through global and then to local coastal upwelling rather than back and forth

                                                    • Nutrients their cycling and upwelling
                                                    • Biolimiting constituents (aka nutrients)
                                                    • Vertical distribution of nutrients
                                                    • Slide Number 4
                                                    • Light and nutrients determine where the productivity is
                                                    • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                    • Productivity follows the nutrient availability
                                                    • Oligotrophic ocean
                                                    • New versus regenerated production
                                                    • Cycling of nitrogen in the ocean
                                                    • Nitrogen limitation and low oxygen
                                                    • The simple Nitrogen cycle
                                                    • Different oxidation states of nitrogen
                                                    • The Nitrogen cycle- reality
                                                    • Annual Stratification sequence
                                                    • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                    • Cycling of nitrogen in the ocean
                                                    • The Nitrogen cyclehellip when things get tough
                                                    • Low oxygen and the ldquospoilersrdquo
                                                    • The Nitrogen cyclehellip the spoilers
                                                    • The Nitrogen cyclehellip the whole story
                                                    • The Marine nitrogen cycle
                                                    • The Eutrophic ocean
                                                    • Vertical distribution of nutrients
                                                    • Hydrocast gear
                                                    • Deploying the CTD
                                                    • Rigging the bottles
                                                    • Water sampling
                                                    • Drawing samples from the bottles
                                                    • Processing the samples
                                                    • Slide Number 31
                                                    • Silica the upwelling nutrient
                                                    • Slide Number 33
                                                    • Vertical distribution of nutrients
                                                    • The silica cycle (global view)
                                                    • The biological pumphellip
                                                    • The conveyor belt circulation
                                                    • Slide Number 38
                                                    • Silica the upwelling nutrient
                                                    • Coastal Upwelling zones in the world ocean
                                                    • Open ocean zones of upwelling hellip
                                                    • Distribution of siliceous sediments
                                                    • Silica cycling in an upwelling zone
                                                    • Silica cycling in a coastal upwelling zone
                                                    • Slide Number 45
                                                    • Slide Number 46
                                                    • Fixed this lecture

                                                      Rigging the bottles

                                                      Water sampling

                                                      Drawing samples from the bottles

                                                      Processing the samples

                                                      Silica the upwelling nutrient

                                                      Silicate (H2SiO4) Limits the growth of diatoms

                                                      SiO2 (Silica) is an important nutrient only for diatoms

                                                      Siliceous plankton make siliceous oozesDiatoms

                                                      Shells are composed of silicon (Si)- (glass)

                                                      Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                      silicoflagellates

                                                      Vertical distribution of nutrients

                                                      Libes 1992

                                                      nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                      In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                      The silica cycle (global view)

                                                      Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                      Biological fixation and bio-pump sinking

                                                      Siliceous sediments

                                                      Upwelling of silica rich water

                                                      Enhanced Diatom growth

                                                      ( Siliceous based productivity)

                                                      River input

                                                      The biological pumphellip Not only controls carbon but the nutrients including silica

                                                      Silica Siliceous sediments

                                                      The conveyor belt circulation

                                                      And thermohaline circulation moves through the systemhellip

                                                      Horizontal distribution of Silicate

                                                      We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                      Emerson and Hedges (2008)

                                                      Silica the upwelling nutrient

                                                      Silicate (H2SiO4) Limits the growth of diatoms

                                                      SiO2 (Silica) is an important nutrient only for diatoms

                                                      Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                      This is because silica from deep water is upwelled there

                                                      Coastal Upwelling zones in the world ocean

                                                      Mann and Lazire

                                                      Open ocean zones of upwelling hellip

                                                      Mann and Lazire

                                                      Distribution of siliceous sediments

                                                      Distribution of siliceous sediments largely aligns with upwelling zones

                                                      Silica cycling in an upwelling zone

                                                      Dissolved silica is present in deep waters

                                                      Silica is fixed in the mixed layer

                                                      Silica upwells

                                                      1

                                                      2

                                                      34Diatoms die and the

                                                      silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                      This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                      Silica cycling in a coastal upwelling zone

                                                      Dissolved silica is present in deep waters

                                                      Silica is fixed in the mixed layer

                                                      Silica upwells

                                                      1

                                                      2

                                                      34

                                                      Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                      This replenishes the SiO2 content of the water and can enhance its silica content

                                                      Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                      Diatoms - plants

                                                      Cell walls are composed of silicon (Si)- essentially glass

                                                      Fixed this lecture

                                                      bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                      goes logically through global and then to local coastal upwelling rather than back and forth

                                                      • Nutrients their cycling and upwelling
                                                      • Biolimiting constituents (aka nutrients)
                                                      • Vertical distribution of nutrients
                                                      • Slide Number 4
                                                      • Light and nutrients determine where the productivity is
                                                      • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                      • Productivity follows the nutrient availability
                                                      • Oligotrophic ocean
                                                      • New versus regenerated production
                                                      • Cycling of nitrogen in the ocean
                                                      • Nitrogen limitation and low oxygen
                                                      • The simple Nitrogen cycle
                                                      • Different oxidation states of nitrogen
                                                      • The Nitrogen cycle- reality
                                                      • Annual Stratification sequence
                                                      • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                      • Cycling of nitrogen in the ocean
                                                      • The Nitrogen cyclehellip when things get tough
                                                      • Low oxygen and the ldquospoilersrdquo
                                                      • The Nitrogen cyclehellip the spoilers
                                                      • The Nitrogen cyclehellip the whole story
                                                      • The Marine nitrogen cycle
                                                      • The Eutrophic ocean
                                                      • Vertical distribution of nutrients
                                                      • Hydrocast gear
                                                      • Deploying the CTD
                                                      • Rigging the bottles
                                                      • Water sampling
                                                      • Drawing samples from the bottles
                                                      • Processing the samples
                                                      • Slide Number 31
                                                      • Silica the upwelling nutrient
                                                      • Slide Number 33
                                                      • Vertical distribution of nutrients
                                                      • The silica cycle (global view)
                                                      • The biological pumphellip
                                                      • The conveyor belt circulation
                                                      • Slide Number 38
                                                      • Silica the upwelling nutrient
                                                      • Coastal Upwelling zones in the world ocean
                                                      • Open ocean zones of upwelling hellip
                                                      • Distribution of siliceous sediments
                                                      • Silica cycling in an upwelling zone
                                                      • Silica cycling in a coastal upwelling zone
                                                      • Slide Number 45
                                                      • Slide Number 46
                                                      • Fixed this lecture

                                                        Water sampling

                                                        Drawing samples from the bottles

                                                        Processing the samples

                                                        Silica the upwelling nutrient

                                                        Silicate (H2SiO4) Limits the growth of diatoms

                                                        SiO2 (Silica) is an important nutrient only for diatoms

                                                        Siliceous plankton make siliceous oozesDiatoms

                                                        Shells are composed of silicon (Si)- (glass)

                                                        Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                        silicoflagellates

                                                        Vertical distribution of nutrients

                                                        Libes 1992

                                                        nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                        In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                        The silica cycle (global view)

                                                        Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                        Biological fixation and bio-pump sinking

                                                        Siliceous sediments

                                                        Upwelling of silica rich water

                                                        Enhanced Diatom growth

                                                        ( Siliceous based productivity)

                                                        River input

                                                        The biological pumphellip Not only controls carbon but the nutrients including silica

                                                        Silica Siliceous sediments

                                                        The conveyor belt circulation

                                                        And thermohaline circulation moves through the systemhellip

                                                        Horizontal distribution of Silicate

                                                        We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                        Emerson and Hedges (2008)

                                                        Silica the upwelling nutrient

                                                        Silicate (H2SiO4) Limits the growth of diatoms

                                                        SiO2 (Silica) is an important nutrient only for diatoms

                                                        Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                        This is because silica from deep water is upwelled there

                                                        Coastal Upwelling zones in the world ocean

                                                        Mann and Lazire

                                                        Open ocean zones of upwelling hellip

                                                        Mann and Lazire

                                                        Distribution of siliceous sediments

                                                        Distribution of siliceous sediments largely aligns with upwelling zones

                                                        Silica cycling in an upwelling zone

                                                        Dissolved silica is present in deep waters

                                                        Silica is fixed in the mixed layer

                                                        Silica upwells

                                                        1

                                                        2

                                                        34Diatoms die and the

                                                        silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                        This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                        Silica cycling in a coastal upwelling zone

                                                        Dissolved silica is present in deep waters

                                                        Silica is fixed in the mixed layer

                                                        Silica upwells

                                                        1

                                                        2

                                                        34

                                                        Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                        This replenishes the SiO2 content of the water and can enhance its silica content

                                                        Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                        Diatoms - plants

                                                        Cell walls are composed of silicon (Si)- essentially glass

                                                        Fixed this lecture

                                                        bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                        goes logically through global and then to local coastal upwelling rather than back and forth

                                                        • Nutrients their cycling and upwelling
                                                        • Biolimiting constituents (aka nutrients)
                                                        • Vertical distribution of nutrients
                                                        • Slide Number 4
                                                        • Light and nutrients determine where the productivity is
                                                        • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                        • Productivity follows the nutrient availability
                                                        • Oligotrophic ocean
                                                        • New versus regenerated production
                                                        • Cycling of nitrogen in the ocean
                                                        • Nitrogen limitation and low oxygen
                                                        • The simple Nitrogen cycle
                                                        • Different oxidation states of nitrogen
                                                        • The Nitrogen cycle- reality
                                                        • Annual Stratification sequence
                                                        • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                        • Cycling of nitrogen in the ocean
                                                        • The Nitrogen cyclehellip when things get tough
                                                        • Low oxygen and the ldquospoilersrdquo
                                                        • The Nitrogen cyclehellip the spoilers
                                                        • The Nitrogen cyclehellip the whole story
                                                        • The Marine nitrogen cycle
                                                        • The Eutrophic ocean
                                                        • Vertical distribution of nutrients
                                                        • Hydrocast gear
                                                        • Deploying the CTD
                                                        • Rigging the bottles
                                                        • Water sampling
                                                        • Drawing samples from the bottles
                                                        • Processing the samples
                                                        • Slide Number 31
                                                        • Silica the upwelling nutrient
                                                        • Slide Number 33
                                                        • Vertical distribution of nutrients
                                                        • The silica cycle (global view)
                                                        • The biological pumphellip
                                                        • The conveyor belt circulation
                                                        • Slide Number 38
                                                        • Silica the upwelling nutrient
                                                        • Coastal Upwelling zones in the world ocean
                                                        • Open ocean zones of upwelling hellip
                                                        • Distribution of siliceous sediments
                                                        • Silica cycling in an upwelling zone
                                                        • Silica cycling in a coastal upwelling zone
                                                        • Slide Number 45
                                                        • Slide Number 46
                                                        • Fixed this lecture

                                                          Drawing samples from the bottles

                                                          Processing the samples

                                                          Silica the upwelling nutrient

                                                          Silicate (H2SiO4) Limits the growth of diatoms

                                                          SiO2 (Silica) is an important nutrient only for diatoms

                                                          Siliceous plankton make siliceous oozesDiatoms

                                                          Shells are composed of silicon (Si)- (glass)

                                                          Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                          silicoflagellates

                                                          Vertical distribution of nutrients

                                                          Libes 1992

                                                          nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                          In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                          The silica cycle (global view)

                                                          Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                          Biological fixation and bio-pump sinking

                                                          Siliceous sediments

                                                          Upwelling of silica rich water

                                                          Enhanced Diatom growth

                                                          ( Siliceous based productivity)

                                                          River input

                                                          The biological pumphellip Not only controls carbon but the nutrients including silica

                                                          Silica Siliceous sediments

                                                          The conveyor belt circulation

                                                          And thermohaline circulation moves through the systemhellip

                                                          Horizontal distribution of Silicate

                                                          We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                          Emerson and Hedges (2008)

                                                          Silica the upwelling nutrient

                                                          Silicate (H2SiO4) Limits the growth of diatoms

                                                          SiO2 (Silica) is an important nutrient only for diatoms

                                                          Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                          This is because silica from deep water is upwelled there

                                                          Coastal Upwelling zones in the world ocean

                                                          Mann and Lazire

                                                          Open ocean zones of upwelling hellip

                                                          Mann and Lazire

                                                          Distribution of siliceous sediments

                                                          Distribution of siliceous sediments largely aligns with upwelling zones

                                                          Silica cycling in an upwelling zone

                                                          Dissolved silica is present in deep waters

                                                          Silica is fixed in the mixed layer

                                                          Silica upwells

                                                          1

                                                          2

                                                          34Diatoms die and the

                                                          silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                          This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                          Silica cycling in a coastal upwelling zone

                                                          Dissolved silica is present in deep waters

                                                          Silica is fixed in the mixed layer

                                                          Silica upwells

                                                          1

                                                          2

                                                          34

                                                          Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                          This replenishes the SiO2 content of the water and can enhance its silica content

                                                          Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                          Diatoms - plants

                                                          Cell walls are composed of silicon (Si)- essentially glass

                                                          Fixed this lecture

                                                          bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                          goes logically through global and then to local coastal upwelling rather than back and forth

                                                          • Nutrients their cycling and upwelling
                                                          • Biolimiting constituents (aka nutrients)
                                                          • Vertical distribution of nutrients
                                                          • Slide Number 4
                                                          • Light and nutrients determine where the productivity is
                                                          • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                          • Productivity follows the nutrient availability
                                                          • Oligotrophic ocean
                                                          • New versus regenerated production
                                                          • Cycling of nitrogen in the ocean
                                                          • Nitrogen limitation and low oxygen
                                                          • The simple Nitrogen cycle
                                                          • Different oxidation states of nitrogen
                                                          • The Nitrogen cycle- reality
                                                          • Annual Stratification sequence
                                                          • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                          • Cycling of nitrogen in the ocean
                                                          • The Nitrogen cyclehellip when things get tough
                                                          • Low oxygen and the ldquospoilersrdquo
                                                          • The Nitrogen cyclehellip the spoilers
                                                          • The Nitrogen cyclehellip the whole story
                                                          • The Marine nitrogen cycle
                                                          • The Eutrophic ocean
                                                          • Vertical distribution of nutrients
                                                          • Hydrocast gear
                                                          • Deploying the CTD
                                                          • Rigging the bottles
                                                          • Water sampling
                                                          • Drawing samples from the bottles
                                                          • Processing the samples
                                                          • Slide Number 31
                                                          • Silica the upwelling nutrient
                                                          • Slide Number 33
                                                          • Vertical distribution of nutrients
                                                          • The silica cycle (global view)
                                                          • The biological pumphellip
                                                          • The conveyor belt circulation
                                                          • Slide Number 38
                                                          • Silica the upwelling nutrient
                                                          • Coastal Upwelling zones in the world ocean
                                                          • Open ocean zones of upwelling hellip
                                                          • Distribution of siliceous sediments
                                                          • Silica cycling in an upwelling zone
                                                          • Silica cycling in a coastal upwelling zone
                                                          • Slide Number 45
                                                          • Slide Number 46
                                                          • Fixed this lecture

                                                            Processing the samples

                                                            Silica the upwelling nutrient

                                                            Silicate (H2SiO4) Limits the growth of diatoms

                                                            SiO2 (Silica) is an important nutrient only for diatoms

                                                            Siliceous plankton make siliceous oozesDiatoms

                                                            Shells are composed of silicon (Si)- (glass)

                                                            Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                            silicoflagellates

                                                            Vertical distribution of nutrients

                                                            Libes 1992

                                                            nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                            In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                            The silica cycle (global view)

                                                            Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                            Biological fixation and bio-pump sinking

                                                            Siliceous sediments

                                                            Upwelling of silica rich water

                                                            Enhanced Diatom growth

                                                            ( Siliceous based productivity)

                                                            River input

                                                            The biological pumphellip Not only controls carbon but the nutrients including silica

                                                            Silica Siliceous sediments

                                                            The conveyor belt circulation

                                                            And thermohaline circulation moves through the systemhellip

                                                            Horizontal distribution of Silicate

                                                            We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                            Emerson and Hedges (2008)

                                                            Silica the upwelling nutrient

                                                            Silicate (H2SiO4) Limits the growth of diatoms

                                                            SiO2 (Silica) is an important nutrient only for diatoms

                                                            Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                            This is because silica from deep water is upwelled there

                                                            Coastal Upwelling zones in the world ocean

                                                            Mann and Lazire

                                                            Open ocean zones of upwelling hellip

                                                            Mann and Lazire

                                                            Distribution of siliceous sediments

                                                            Distribution of siliceous sediments largely aligns with upwelling zones

                                                            Silica cycling in an upwelling zone

                                                            Dissolved silica is present in deep waters

                                                            Silica is fixed in the mixed layer

                                                            Silica upwells

                                                            1

                                                            2

                                                            34Diatoms die and the

                                                            silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                            This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                            Silica cycling in a coastal upwelling zone

                                                            Dissolved silica is present in deep waters

                                                            Silica is fixed in the mixed layer

                                                            Silica upwells

                                                            1

                                                            2

                                                            34

                                                            Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                            This replenishes the SiO2 content of the water and can enhance its silica content

                                                            Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                            Diatoms - plants

                                                            Cell walls are composed of silicon (Si)- essentially glass

                                                            Fixed this lecture

                                                            bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                            goes logically through global and then to local coastal upwelling rather than back and forth

                                                            • Nutrients their cycling and upwelling
                                                            • Biolimiting constituents (aka nutrients)
                                                            • Vertical distribution of nutrients
                                                            • Slide Number 4
                                                            • Light and nutrients determine where the productivity is
                                                            • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                            • Productivity follows the nutrient availability
                                                            • Oligotrophic ocean
                                                            • New versus regenerated production
                                                            • Cycling of nitrogen in the ocean
                                                            • Nitrogen limitation and low oxygen
                                                            • The simple Nitrogen cycle
                                                            • Different oxidation states of nitrogen
                                                            • The Nitrogen cycle- reality
                                                            • Annual Stratification sequence
                                                            • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                            • Cycling of nitrogen in the ocean
                                                            • The Nitrogen cyclehellip when things get tough
                                                            • Low oxygen and the ldquospoilersrdquo
                                                            • The Nitrogen cyclehellip the spoilers
                                                            • The Nitrogen cyclehellip the whole story
                                                            • The Marine nitrogen cycle
                                                            • The Eutrophic ocean
                                                            • Vertical distribution of nutrients
                                                            • Hydrocast gear
                                                            • Deploying the CTD
                                                            • Rigging the bottles
                                                            • Water sampling
                                                            • Drawing samples from the bottles
                                                            • Processing the samples
                                                            • Slide Number 31
                                                            • Silica the upwelling nutrient
                                                            • Slide Number 33
                                                            • Vertical distribution of nutrients
                                                            • The silica cycle (global view)
                                                            • The biological pumphellip
                                                            • The conveyor belt circulation
                                                            • Slide Number 38
                                                            • Silica the upwelling nutrient
                                                            • Coastal Upwelling zones in the world ocean
                                                            • Open ocean zones of upwelling hellip
                                                            • Distribution of siliceous sediments
                                                            • Silica cycling in an upwelling zone
                                                            • Silica cycling in a coastal upwelling zone
                                                            • Slide Number 45
                                                            • Slide Number 46
                                                            • Fixed this lecture

                                                              Silica the upwelling nutrient

                                                              Silicate (H2SiO4) Limits the growth of diatoms

                                                              SiO2 (Silica) is an important nutrient only for diatoms

                                                              Siliceous plankton make siliceous oozesDiatoms

                                                              Shells are composed of silicon (Si)- (glass)

                                                              Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                              silicoflagellates

                                                              Vertical distribution of nutrients

                                                              Libes 1992

                                                              nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                              In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                              The silica cycle (global view)

                                                              Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                              Biological fixation and bio-pump sinking

                                                              Siliceous sediments

                                                              Upwelling of silica rich water

                                                              Enhanced Diatom growth

                                                              ( Siliceous based productivity)

                                                              River input

                                                              The biological pumphellip Not only controls carbon but the nutrients including silica

                                                              Silica Siliceous sediments

                                                              The conveyor belt circulation

                                                              And thermohaline circulation moves through the systemhellip

                                                              Horizontal distribution of Silicate

                                                              We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                              Emerson and Hedges (2008)

                                                              Silica the upwelling nutrient

                                                              Silicate (H2SiO4) Limits the growth of diatoms

                                                              SiO2 (Silica) is an important nutrient only for diatoms

                                                              Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                              This is because silica from deep water is upwelled there

                                                              Coastal Upwelling zones in the world ocean

                                                              Mann and Lazire

                                                              Open ocean zones of upwelling hellip

                                                              Mann and Lazire

                                                              Distribution of siliceous sediments

                                                              Distribution of siliceous sediments largely aligns with upwelling zones

                                                              Silica cycling in an upwelling zone

                                                              Dissolved silica is present in deep waters

                                                              Silica is fixed in the mixed layer

                                                              Silica upwells

                                                              1

                                                              2

                                                              34Diatoms die and the

                                                              silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                              This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                              Silica cycling in a coastal upwelling zone

                                                              Dissolved silica is present in deep waters

                                                              Silica is fixed in the mixed layer

                                                              Silica upwells

                                                              1

                                                              2

                                                              34

                                                              Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                              This replenishes the SiO2 content of the water and can enhance its silica content

                                                              Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                              Diatoms - plants

                                                              Cell walls are composed of silicon (Si)- essentially glass

                                                              Fixed this lecture

                                                              bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                              goes logically through global and then to local coastal upwelling rather than back and forth

                                                              • Nutrients their cycling and upwelling
                                                              • Biolimiting constituents (aka nutrients)
                                                              • Vertical distribution of nutrients
                                                              • Slide Number 4
                                                              • Light and nutrients determine where the productivity is
                                                              • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                              • Productivity follows the nutrient availability
                                                              • Oligotrophic ocean
                                                              • New versus regenerated production
                                                              • Cycling of nitrogen in the ocean
                                                              • Nitrogen limitation and low oxygen
                                                              • The simple Nitrogen cycle
                                                              • Different oxidation states of nitrogen
                                                              • The Nitrogen cycle- reality
                                                              • Annual Stratification sequence
                                                              • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                              • Cycling of nitrogen in the ocean
                                                              • The Nitrogen cyclehellip when things get tough
                                                              • Low oxygen and the ldquospoilersrdquo
                                                              • The Nitrogen cyclehellip the spoilers
                                                              • The Nitrogen cyclehellip the whole story
                                                              • The Marine nitrogen cycle
                                                              • The Eutrophic ocean
                                                              • Vertical distribution of nutrients
                                                              • Hydrocast gear
                                                              • Deploying the CTD
                                                              • Rigging the bottles
                                                              • Water sampling
                                                              • Drawing samples from the bottles
                                                              • Processing the samples
                                                              • Slide Number 31
                                                              • Silica the upwelling nutrient
                                                              • Slide Number 33
                                                              • Vertical distribution of nutrients
                                                              • The silica cycle (global view)
                                                              • The biological pumphellip
                                                              • The conveyor belt circulation
                                                              • Slide Number 38
                                                              • Silica the upwelling nutrient
                                                              • Coastal Upwelling zones in the world ocean
                                                              • Open ocean zones of upwelling hellip
                                                              • Distribution of siliceous sediments
                                                              • Silica cycling in an upwelling zone
                                                              • Silica cycling in a coastal upwelling zone
                                                              • Slide Number 45
                                                              • Slide Number 46
                                                              • Fixed this lecture

                                                                Siliceous plankton make siliceous oozesDiatoms

                                                                Shells are composed of silicon (Si)- (glass)

                                                                Form silica deposits on ocean floor (siliceous ooze)radiolaria

                                                                silicoflagellates

                                                                Vertical distribution of nutrients

                                                                Libes 1992

                                                                nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                                In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                                The silica cycle (global view)

                                                                Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                                Biological fixation and bio-pump sinking

                                                                Siliceous sediments

                                                                Upwelling of silica rich water

                                                                Enhanced Diatom growth

                                                                ( Siliceous based productivity)

                                                                River input

                                                                The biological pumphellip Not only controls carbon but the nutrients including silica

                                                                Silica Siliceous sediments

                                                                The conveyor belt circulation

                                                                And thermohaline circulation moves through the systemhellip

                                                                Horizontal distribution of Silicate

                                                                We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                                Emerson and Hedges (2008)

                                                                Silica the upwelling nutrient

                                                                Silicate (H2SiO4) Limits the growth of diatoms

                                                                SiO2 (Silica) is an important nutrient only for diatoms

                                                                Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                                This is because silica from deep water is upwelled there

                                                                Coastal Upwelling zones in the world ocean

                                                                Mann and Lazire

                                                                Open ocean zones of upwelling hellip

                                                                Mann and Lazire

                                                                Distribution of siliceous sediments

                                                                Distribution of siliceous sediments largely aligns with upwelling zones

                                                                Silica cycling in an upwelling zone

                                                                Dissolved silica is present in deep waters

                                                                Silica is fixed in the mixed layer

                                                                Silica upwells

                                                                1

                                                                2

                                                                34Diatoms die and the

                                                                silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                Silica cycling in a coastal upwelling zone

                                                                Dissolved silica is present in deep waters

                                                                Silica is fixed in the mixed layer

                                                                Silica upwells

                                                                1

                                                                2

                                                                34

                                                                Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                This replenishes the SiO2 content of the water and can enhance its silica content

                                                                Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                Diatoms - plants

                                                                Cell walls are composed of silicon (Si)- essentially glass

                                                                Fixed this lecture

                                                                bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                goes logically through global and then to local coastal upwelling rather than back and forth

                                                                • Nutrients their cycling and upwelling
                                                                • Biolimiting constituents (aka nutrients)
                                                                • Vertical distribution of nutrients
                                                                • Slide Number 4
                                                                • Light and nutrients determine where the productivity is
                                                                • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                • Productivity follows the nutrient availability
                                                                • Oligotrophic ocean
                                                                • New versus regenerated production
                                                                • Cycling of nitrogen in the ocean
                                                                • Nitrogen limitation and low oxygen
                                                                • The simple Nitrogen cycle
                                                                • Different oxidation states of nitrogen
                                                                • The Nitrogen cycle- reality
                                                                • Annual Stratification sequence
                                                                • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                • Cycling of nitrogen in the ocean
                                                                • The Nitrogen cyclehellip when things get tough
                                                                • Low oxygen and the ldquospoilersrdquo
                                                                • The Nitrogen cyclehellip the spoilers
                                                                • The Nitrogen cyclehellip the whole story
                                                                • The Marine nitrogen cycle
                                                                • The Eutrophic ocean
                                                                • Vertical distribution of nutrients
                                                                • Hydrocast gear
                                                                • Deploying the CTD
                                                                • Rigging the bottles
                                                                • Water sampling
                                                                • Drawing samples from the bottles
                                                                • Processing the samples
                                                                • Slide Number 31
                                                                • Silica the upwelling nutrient
                                                                • Slide Number 33
                                                                • Vertical distribution of nutrients
                                                                • The silica cycle (global view)
                                                                • The biological pumphellip
                                                                • The conveyor belt circulation
                                                                • Slide Number 38
                                                                • Silica the upwelling nutrient
                                                                • Coastal Upwelling zones in the world ocean
                                                                • Open ocean zones of upwelling hellip
                                                                • Distribution of siliceous sediments
                                                                • Silica cycling in an upwelling zone
                                                                • Silica cycling in a coastal upwelling zone
                                                                • Slide Number 45
                                                                • Slide Number 46
                                                                • Fixed this lecture

                                                                  Vertical distribution of nutrients

                                                                  Libes 1992

                                                                  nitrate 10-6 molliterPhosphate 10-6 molliter silicate 10-6 molliter

                                                                  In upwelling zonesduring upwelling phosphorous and nitrate are generally not fully depleted

                                                                  The silica cycle (global view)

                                                                  Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                                  Biological fixation and bio-pump sinking

                                                                  Siliceous sediments

                                                                  Upwelling of silica rich water

                                                                  Enhanced Diatom growth

                                                                  ( Siliceous based productivity)

                                                                  River input

                                                                  The biological pumphellip Not only controls carbon but the nutrients including silica

                                                                  Silica Siliceous sediments

                                                                  The conveyor belt circulation

                                                                  And thermohaline circulation moves through the systemhellip

                                                                  Horizontal distribution of Silicate

                                                                  We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                                  Emerson and Hedges (2008)

                                                                  Silica the upwelling nutrient

                                                                  Silicate (H2SiO4) Limits the growth of diatoms

                                                                  SiO2 (Silica) is an important nutrient only for diatoms

                                                                  Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                                  This is because silica from deep water is upwelled there

                                                                  Coastal Upwelling zones in the world ocean

                                                                  Mann and Lazire

                                                                  Open ocean zones of upwelling hellip

                                                                  Mann and Lazire

                                                                  Distribution of siliceous sediments

                                                                  Distribution of siliceous sediments largely aligns with upwelling zones

                                                                  Silica cycling in an upwelling zone

                                                                  Dissolved silica is present in deep waters

                                                                  Silica is fixed in the mixed layer

                                                                  Silica upwells

                                                                  1

                                                                  2

                                                                  34Diatoms die and the

                                                                  silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                  This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                  Silica cycling in a coastal upwelling zone

                                                                  Dissolved silica is present in deep waters

                                                                  Silica is fixed in the mixed layer

                                                                  Silica upwells

                                                                  1

                                                                  2

                                                                  34

                                                                  Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                  This replenishes the SiO2 content of the water and can enhance its silica content

                                                                  Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                  Diatoms - plants

                                                                  Cell walls are composed of silicon (Si)- essentially glass

                                                                  Fixed this lecture

                                                                  bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                  goes logically through global and then to local coastal upwelling rather than back and forth

                                                                  • Nutrients their cycling and upwelling
                                                                  • Biolimiting constituents (aka nutrients)
                                                                  • Vertical distribution of nutrients
                                                                  • Slide Number 4
                                                                  • Light and nutrients determine where the productivity is
                                                                  • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                  • Productivity follows the nutrient availability
                                                                  • Oligotrophic ocean
                                                                  • New versus regenerated production
                                                                  • Cycling of nitrogen in the ocean
                                                                  • Nitrogen limitation and low oxygen
                                                                  • The simple Nitrogen cycle
                                                                  • Different oxidation states of nitrogen
                                                                  • The Nitrogen cycle- reality
                                                                  • Annual Stratification sequence
                                                                  • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                  • Cycling of nitrogen in the ocean
                                                                  • The Nitrogen cyclehellip when things get tough
                                                                  • Low oxygen and the ldquospoilersrdquo
                                                                  • The Nitrogen cyclehellip the spoilers
                                                                  • The Nitrogen cyclehellip the whole story
                                                                  • The Marine nitrogen cycle
                                                                  • The Eutrophic ocean
                                                                  • Vertical distribution of nutrients
                                                                  • Hydrocast gear
                                                                  • Deploying the CTD
                                                                  • Rigging the bottles
                                                                  • Water sampling
                                                                  • Drawing samples from the bottles
                                                                  • Processing the samples
                                                                  • Slide Number 31
                                                                  • Silica the upwelling nutrient
                                                                  • Slide Number 33
                                                                  • Vertical distribution of nutrients
                                                                  • The silica cycle (global view)
                                                                  • The biological pumphellip
                                                                  • The conveyor belt circulation
                                                                  • Slide Number 38
                                                                  • Silica the upwelling nutrient
                                                                  • Coastal Upwelling zones in the world ocean
                                                                  • Open ocean zones of upwelling hellip
                                                                  • Distribution of siliceous sediments
                                                                  • Silica cycling in an upwelling zone
                                                                  • Silica cycling in a coastal upwelling zone
                                                                  • Slide Number 45
                                                                  • Slide Number 46
                                                                  • Fixed this lecture

                                                                    The silica cycle (global view)

                                                                    Silica is undersaturated and dissolveshellip it only forms deposits under major productivity areas

                                                                    Biological fixation and bio-pump sinking

                                                                    Siliceous sediments

                                                                    Upwelling of silica rich water

                                                                    Enhanced Diatom growth

                                                                    ( Siliceous based productivity)

                                                                    River input

                                                                    The biological pumphellip Not only controls carbon but the nutrients including silica

                                                                    Silica Siliceous sediments

                                                                    The conveyor belt circulation

                                                                    And thermohaline circulation moves through the systemhellip

                                                                    Horizontal distribution of Silicate

                                                                    We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                                    Emerson and Hedges (2008)

                                                                    Silica the upwelling nutrient

                                                                    Silicate (H2SiO4) Limits the growth of diatoms

                                                                    SiO2 (Silica) is an important nutrient only for diatoms

                                                                    Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                                    This is because silica from deep water is upwelled there

                                                                    Coastal Upwelling zones in the world ocean

                                                                    Mann and Lazire

                                                                    Open ocean zones of upwelling hellip

                                                                    Mann and Lazire

                                                                    Distribution of siliceous sediments

                                                                    Distribution of siliceous sediments largely aligns with upwelling zones

                                                                    Silica cycling in an upwelling zone

                                                                    Dissolved silica is present in deep waters

                                                                    Silica is fixed in the mixed layer

                                                                    Silica upwells

                                                                    1

                                                                    2

                                                                    34Diatoms die and the

                                                                    silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                    This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                    Silica cycling in a coastal upwelling zone

                                                                    Dissolved silica is present in deep waters

                                                                    Silica is fixed in the mixed layer

                                                                    Silica upwells

                                                                    1

                                                                    2

                                                                    34

                                                                    Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                    This replenishes the SiO2 content of the water and can enhance its silica content

                                                                    Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                    Diatoms - plants

                                                                    Cell walls are composed of silicon (Si)- essentially glass

                                                                    Fixed this lecture

                                                                    bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                    goes logically through global and then to local coastal upwelling rather than back and forth

                                                                    • Nutrients their cycling and upwelling
                                                                    • Biolimiting constituents (aka nutrients)
                                                                    • Vertical distribution of nutrients
                                                                    • Slide Number 4
                                                                    • Light and nutrients determine where the productivity is
                                                                    • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                    • Productivity follows the nutrient availability
                                                                    • Oligotrophic ocean
                                                                    • New versus regenerated production
                                                                    • Cycling of nitrogen in the ocean
                                                                    • Nitrogen limitation and low oxygen
                                                                    • The simple Nitrogen cycle
                                                                    • Different oxidation states of nitrogen
                                                                    • The Nitrogen cycle- reality
                                                                    • Annual Stratification sequence
                                                                    • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                    • Cycling of nitrogen in the ocean
                                                                    • The Nitrogen cyclehellip when things get tough
                                                                    • Low oxygen and the ldquospoilersrdquo
                                                                    • The Nitrogen cyclehellip the spoilers
                                                                    • The Nitrogen cyclehellip the whole story
                                                                    • The Marine nitrogen cycle
                                                                    • The Eutrophic ocean
                                                                    • Vertical distribution of nutrients
                                                                    • Hydrocast gear
                                                                    • Deploying the CTD
                                                                    • Rigging the bottles
                                                                    • Water sampling
                                                                    • Drawing samples from the bottles
                                                                    • Processing the samples
                                                                    • Slide Number 31
                                                                    • Silica the upwelling nutrient
                                                                    • Slide Number 33
                                                                    • Vertical distribution of nutrients
                                                                    • The silica cycle (global view)
                                                                    • The biological pumphellip
                                                                    • The conveyor belt circulation
                                                                    • Slide Number 38
                                                                    • Silica the upwelling nutrient
                                                                    • Coastal Upwelling zones in the world ocean
                                                                    • Open ocean zones of upwelling hellip
                                                                    • Distribution of siliceous sediments
                                                                    • Silica cycling in an upwelling zone
                                                                    • Silica cycling in a coastal upwelling zone
                                                                    • Slide Number 45
                                                                    • Slide Number 46
                                                                    • Fixed this lecture

                                                                      The biological pumphellip Not only controls carbon but the nutrients including silica

                                                                      Silica Siliceous sediments

                                                                      The conveyor belt circulation

                                                                      And thermohaline circulation moves through the systemhellip

                                                                      Horizontal distribution of Silicate

                                                                      We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                                      Emerson and Hedges (2008)

                                                                      Silica the upwelling nutrient

                                                                      Silicate (H2SiO4) Limits the growth of diatoms

                                                                      SiO2 (Silica) is an important nutrient only for diatoms

                                                                      Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                                      This is because silica from deep water is upwelled there

                                                                      Coastal Upwelling zones in the world ocean

                                                                      Mann and Lazire

                                                                      Open ocean zones of upwelling hellip

                                                                      Mann and Lazire

                                                                      Distribution of siliceous sediments

                                                                      Distribution of siliceous sediments largely aligns with upwelling zones

                                                                      Silica cycling in an upwelling zone

                                                                      Dissolved silica is present in deep waters

                                                                      Silica is fixed in the mixed layer

                                                                      Silica upwells

                                                                      1

                                                                      2

                                                                      34Diatoms die and the

                                                                      silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                      This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                      Silica cycling in a coastal upwelling zone

                                                                      Dissolved silica is present in deep waters

                                                                      Silica is fixed in the mixed layer

                                                                      Silica upwells

                                                                      1

                                                                      2

                                                                      34

                                                                      Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                      This replenishes the SiO2 content of the water and can enhance its silica content

                                                                      Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                      Diatoms - plants

                                                                      Cell walls are composed of silicon (Si)- essentially glass

                                                                      Fixed this lecture

                                                                      bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                      goes logically through global and then to local coastal upwelling rather than back and forth

                                                                      • Nutrients their cycling and upwelling
                                                                      • Biolimiting constituents (aka nutrients)
                                                                      • Vertical distribution of nutrients
                                                                      • Slide Number 4
                                                                      • Light and nutrients determine where the productivity is
                                                                      • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                      • Productivity follows the nutrient availability
                                                                      • Oligotrophic ocean
                                                                      • New versus regenerated production
                                                                      • Cycling of nitrogen in the ocean
                                                                      • Nitrogen limitation and low oxygen
                                                                      • The simple Nitrogen cycle
                                                                      • Different oxidation states of nitrogen
                                                                      • The Nitrogen cycle- reality
                                                                      • Annual Stratification sequence
                                                                      • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                      • Cycling of nitrogen in the ocean
                                                                      • The Nitrogen cyclehellip when things get tough
                                                                      • Low oxygen and the ldquospoilersrdquo
                                                                      • The Nitrogen cyclehellip the spoilers
                                                                      • The Nitrogen cyclehellip the whole story
                                                                      • The Marine nitrogen cycle
                                                                      • The Eutrophic ocean
                                                                      • Vertical distribution of nutrients
                                                                      • Hydrocast gear
                                                                      • Deploying the CTD
                                                                      • Rigging the bottles
                                                                      • Water sampling
                                                                      • Drawing samples from the bottles
                                                                      • Processing the samples
                                                                      • Slide Number 31
                                                                      • Silica the upwelling nutrient
                                                                      • Slide Number 33
                                                                      • Vertical distribution of nutrients
                                                                      • The silica cycle (global view)
                                                                      • The biological pumphellip
                                                                      • The conveyor belt circulation
                                                                      • Slide Number 38
                                                                      • Silica the upwelling nutrient
                                                                      • Coastal Upwelling zones in the world ocean
                                                                      • Open ocean zones of upwelling hellip
                                                                      • Distribution of siliceous sediments
                                                                      • Silica cycling in an upwelling zone
                                                                      • Silica cycling in a coastal upwelling zone
                                                                      • Slide Number 45
                                                                      • Slide Number 46
                                                                      • Fixed this lecture

                                                                        The conveyor belt circulation

                                                                        And thermohaline circulation moves through the systemhellip

                                                                        Horizontal distribution of Silicate

                                                                        We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                                        Emerson and Hedges (2008)

                                                                        Silica the upwelling nutrient

                                                                        Silicate (H2SiO4) Limits the growth of diatoms

                                                                        SiO2 (Silica) is an important nutrient only for diatoms

                                                                        Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                                        This is because silica from deep water is upwelled there

                                                                        Coastal Upwelling zones in the world ocean

                                                                        Mann and Lazire

                                                                        Open ocean zones of upwelling hellip

                                                                        Mann and Lazire

                                                                        Distribution of siliceous sediments

                                                                        Distribution of siliceous sediments largely aligns with upwelling zones

                                                                        Silica cycling in an upwelling zone

                                                                        Dissolved silica is present in deep waters

                                                                        Silica is fixed in the mixed layer

                                                                        Silica upwells

                                                                        1

                                                                        2

                                                                        34Diatoms die and the

                                                                        silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                        This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                        Silica cycling in a coastal upwelling zone

                                                                        Dissolved silica is present in deep waters

                                                                        Silica is fixed in the mixed layer

                                                                        Silica upwells

                                                                        1

                                                                        2

                                                                        34

                                                                        Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                        5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                        This replenishes the SiO2 content of the water and can enhance its silica content

                                                                        Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                        Diatoms - plants

                                                                        Cell walls are composed of silicon (Si)- essentially glass

                                                                        Fixed this lecture

                                                                        bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                        goes logically through global and then to local coastal upwelling rather than back and forth

                                                                        • Nutrients their cycling and upwelling
                                                                        • Biolimiting constituents (aka nutrients)
                                                                        • Vertical distribution of nutrients
                                                                        • Slide Number 4
                                                                        • Light and nutrients determine where the productivity is
                                                                        • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                        • Productivity follows the nutrient availability
                                                                        • Oligotrophic ocean
                                                                        • New versus regenerated production
                                                                        • Cycling of nitrogen in the ocean
                                                                        • Nitrogen limitation and low oxygen
                                                                        • The simple Nitrogen cycle
                                                                        • Different oxidation states of nitrogen
                                                                        • The Nitrogen cycle- reality
                                                                        • Annual Stratification sequence
                                                                        • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                        • Cycling of nitrogen in the ocean
                                                                        • The Nitrogen cyclehellip when things get tough
                                                                        • Low oxygen and the ldquospoilersrdquo
                                                                        • The Nitrogen cyclehellip the spoilers
                                                                        • The Nitrogen cyclehellip the whole story
                                                                        • The Marine nitrogen cycle
                                                                        • The Eutrophic ocean
                                                                        • Vertical distribution of nutrients
                                                                        • Hydrocast gear
                                                                        • Deploying the CTD
                                                                        • Rigging the bottles
                                                                        • Water sampling
                                                                        • Drawing samples from the bottles
                                                                        • Processing the samples
                                                                        • Slide Number 31
                                                                        • Silica the upwelling nutrient
                                                                        • Slide Number 33
                                                                        • Vertical distribution of nutrients
                                                                        • The silica cycle (global view)
                                                                        • The biological pumphellip
                                                                        • The conveyor belt circulation
                                                                        • Slide Number 38
                                                                        • Silica the upwelling nutrient
                                                                        • Coastal Upwelling zones in the world ocean
                                                                        • Open ocean zones of upwelling hellip
                                                                        • Distribution of siliceous sediments
                                                                        • Silica cycling in an upwelling zone
                                                                        • Silica cycling in a coastal upwelling zone
                                                                        • Slide Number 45
                                                                        • Slide Number 46
                                                                        • Fixed this lecture

                                                                          Horizontal distribution of Silicate

                                                                          We see a dramatic difference in distribution between the Atlantic and the Pacific

                                                                          Emerson and Hedges (2008)

                                                                          Silica the upwelling nutrient

                                                                          Silicate (H2SiO4) Limits the growth of diatoms

                                                                          SiO2 (Silica) is an important nutrient only for diatoms

                                                                          Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                                          This is because silica from deep water is upwelled there

                                                                          Coastal Upwelling zones in the world ocean

                                                                          Mann and Lazire

                                                                          Open ocean zones of upwelling hellip

                                                                          Mann and Lazire

                                                                          Distribution of siliceous sediments

                                                                          Distribution of siliceous sediments largely aligns with upwelling zones

                                                                          Silica cycling in an upwelling zone

                                                                          Dissolved silica is present in deep waters

                                                                          Silica is fixed in the mixed layer

                                                                          Silica upwells

                                                                          1

                                                                          2

                                                                          34Diatoms die and the

                                                                          silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                          This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                          Silica cycling in a coastal upwelling zone

                                                                          Dissolved silica is present in deep waters

                                                                          Silica is fixed in the mixed layer

                                                                          Silica upwells

                                                                          1

                                                                          2

                                                                          34

                                                                          Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                          5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                          This replenishes the SiO2 content of the water and can enhance its silica content

                                                                          Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                          Diatoms - plants

                                                                          Cell walls are composed of silicon (Si)- essentially glass

                                                                          Fixed this lecture

                                                                          bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                          goes logically through global and then to local coastal upwelling rather than back and forth

                                                                          • Nutrients their cycling and upwelling
                                                                          • Biolimiting constituents (aka nutrients)
                                                                          • Vertical distribution of nutrients
                                                                          • Slide Number 4
                                                                          • Light and nutrients determine where the productivity is
                                                                          • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                          • Productivity follows the nutrient availability
                                                                          • Oligotrophic ocean
                                                                          • New versus regenerated production
                                                                          • Cycling of nitrogen in the ocean
                                                                          • Nitrogen limitation and low oxygen
                                                                          • The simple Nitrogen cycle
                                                                          • Different oxidation states of nitrogen
                                                                          • The Nitrogen cycle- reality
                                                                          • Annual Stratification sequence
                                                                          • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                          • Cycling of nitrogen in the ocean
                                                                          • The Nitrogen cyclehellip when things get tough
                                                                          • Low oxygen and the ldquospoilersrdquo
                                                                          • The Nitrogen cyclehellip the spoilers
                                                                          • The Nitrogen cyclehellip the whole story
                                                                          • The Marine nitrogen cycle
                                                                          • The Eutrophic ocean
                                                                          • Vertical distribution of nutrients
                                                                          • Hydrocast gear
                                                                          • Deploying the CTD
                                                                          • Rigging the bottles
                                                                          • Water sampling
                                                                          • Drawing samples from the bottles
                                                                          • Processing the samples
                                                                          • Slide Number 31
                                                                          • Silica the upwelling nutrient
                                                                          • Slide Number 33
                                                                          • Vertical distribution of nutrients
                                                                          • The silica cycle (global view)
                                                                          • The biological pumphellip
                                                                          • The conveyor belt circulation
                                                                          • Slide Number 38
                                                                          • Silica the upwelling nutrient
                                                                          • Coastal Upwelling zones in the world ocean
                                                                          • Open ocean zones of upwelling hellip
                                                                          • Distribution of siliceous sediments
                                                                          • Silica cycling in an upwelling zone
                                                                          • Silica cycling in a coastal upwelling zone
                                                                          • Slide Number 45
                                                                          • Slide Number 46
                                                                          • Fixed this lecture

                                                                            Silica the upwelling nutrient

                                                                            Silicate (H2SiO4) Limits the growth of diatoms

                                                                            SiO2 (Silica) is an important nutrient only for diatoms

                                                                            Upwelling zones are areas with high diatom productivity because silica is plentiful

                                                                            This is because silica from deep water is upwelled there

                                                                            Coastal Upwelling zones in the world ocean

                                                                            Mann and Lazire

                                                                            Open ocean zones of upwelling hellip

                                                                            Mann and Lazire

                                                                            Distribution of siliceous sediments

                                                                            Distribution of siliceous sediments largely aligns with upwelling zones

                                                                            Silica cycling in an upwelling zone

                                                                            Dissolved silica is present in deep waters

                                                                            Silica is fixed in the mixed layer

                                                                            Silica upwells

                                                                            1

                                                                            2

                                                                            34Diatoms die and the

                                                                            silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                            This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                            Silica cycling in a coastal upwelling zone

                                                                            Dissolved silica is present in deep waters

                                                                            Silica is fixed in the mixed layer

                                                                            Silica upwells

                                                                            1

                                                                            2

                                                                            34

                                                                            Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                            5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                            This replenishes the SiO2 content of the water and can enhance its silica content

                                                                            Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                            Diatoms - plants

                                                                            Cell walls are composed of silicon (Si)- essentially glass

                                                                            Fixed this lecture

                                                                            bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                            goes logically through global and then to local coastal upwelling rather than back and forth

                                                                            • Nutrients their cycling and upwelling
                                                                            • Biolimiting constituents (aka nutrients)
                                                                            • Vertical distribution of nutrients
                                                                            • Slide Number 4
                                                                            • Light and nutrients determine where the productivity is
                                                                            • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                            • Productivity follows the nutrient availability
                                                                            • Oligotrophic ocean
                                                                            • New versus regenerated production
                                                                            • Cycling of nitrogen in the ocean
                                                                            • Nitrogen limitation and low oxygen
                                                                            • The simple Nitrogen cycle
                                                                            • Different oxidation states of nitrogen
                                                                            • The Nitrogen cycle- reality
                                                                            • Annual Stratification sequence
                                                                            • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                            • Cycling of nitrogen in the ocean
                                                                            • The Nitrogen cyclehellip when things get tough
                                                                            • Low oxygen and the ldquospoilersrdquo
                                                                            • The Nitrogen cyclehellip the spoilers
                                                                            • The Nitrogen cyclehellip the whole story
                                                                            • The Marine nitrogen cycle
                                                                            • The Eutrophic ocean
                                                                            • Vertical distribution of nutrients
                                                                            • Hydrocast gear
                                                                            • Deploying the CTD
                                                                            • Rigging the bottles
                                                                            • Water sampling
                                                                            • Drawing samples from the bottles
                                                                            • Processing the samples
                                                                            • Slide Number 31
                                                                            • Silica the upwelling nutrient
                                                                            • Slide Number 33
                                                                            • Vertical distribution of nutrients
                                                                            • The silica cycle (global view)
                                                                            • The biological pumphellip
                                                                            • The conveyor belt circulation
                                                                            • Slide Number 38
                                                                            • Silica the upwelling nutrient
                                                                            • Coastal Upwelling zones in the world ocean
                                                                            • Open ocean zones of upwelling hellip
                                                                            • Distribution of siliceous sediments
                                                                            • Silica cycling in an upwelling zone
                                                                            • Silica cycling in a coastal upwelling zone
                                                                            • Slide Number 45
                                                                            • Slide Number 46
                                                                            • Fixed this lecture

                                                                              Coastal Upwelling zones in the world ocean

                                                                              Mann and Lazire

                                                                              Open ocean zones of upwelling hellip

                                                                              Mann and Lazire

                                                                              Distribution of siliceous sediments

                                                                              Distribution of siliceous sediments largely aligns with upwelling zones

                                                                              Silica cycling in an upwelling zone

                                                                              Dissolved silica is present in deep waters

                                                                              Silica is fixed in the mixed layer

                                                                              Silica upwells

                                                                              1

                                                                              2

                                                                              34Diatoms die and the

                                                                              silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                              This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                              Silica cycling in a coastal upwelling zone

                                                                              Dissolved silica is present in deep waters

                                                                              Silica is fixed in the mixed layer

                                                                              Silica upwells

                                                                              1

                                                                              2

                                                                              34

                                                                              Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                              5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                              This replenishes the SiO2 content of the water and can enhance its silica content

                                                                              Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                              Diatoms - plants

                                                                              Cell walls are composed of silicon (Si)- essentially glass

                                                                              Fixed this lecture

                                                                              bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                              goes logically through global and then to local coastal upwelling rather than back and forth

                                                                              • Nutrients their cycling and upwelling
                                                                              • Biolimiting constituents (aka nutrients)
                                                                              • Vertical distribution of nutrients
                                                                              • Slide Number 4
                                                                              • Light and nutrients determine where the productivity is
                                                                              • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                              • Productivity follows the nutrient availability
                                                                              • Oligotrophic ocean
                                                                              • New versus regenerated production
                                                                              • Cycling of nitrogen in the ocean
                                                                              • Nitrogen limitation and low oxygen
                                                                              • The simple Nitrogen cycle
                                                                              • Different oxidation states of nitrogen
                                                                              • The Nitrogen cycle- reality
                                                                              • Annual Stratification sequence
                                                                              • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                              • Cycling of nitrogen in the ocean
                                                                              • The Nitrogen cyclehellip when things get tough
                                                                              • Low oxygen and the ldquospoilersrdquo
                                                                              • The Nitrogen cyclehellip the spoilers
                                                                              • The Nitrogen cyclehellip the whole story
                                                                              • The Marine nitrogen cycle
                                                                              • The Eutrophic ocean
                                                                              • Vertical distribution of nutrients
                                                                              • Hydrocast gear
                                                                              • Deploying the CTD
                                                                              • Rigging the bottles
                                                                              • Water sampling
                                                                              • Drawing samples from the bottles
                                                                              • Processing the samples
                                                                              • Slide Number 31
                                                                              • Silica the upwelling nutrient
                                                                              • Slide Number 33
                                                                              • Vertical distribution of nutrients
                                                                              • The silica cycle (global view)
                                                                              • The biological pumphellip
                                                                              • The conveyor belt circulation
                                                                              • Slide Number 38
                                                                              • Silica the upwelling nutrient
                                                                              • Coastal Upwelling zones in the world ocean
                                                                              • Open ocean zones of upwelling hellip
                                                                              • Distribution of siliceous sediments
                                                                              • Silica cycling in an upwelling zone
                                                                              • Silica cycling in a coastal upwelling zone
                                                                              • Slide Number 45
                                                                              • Slide Number 46
                                                                              • Fixed this lecture

                                                                                Open ocean zones of upwelling hellip

                                                                                Mann and Lazire

                                                                                Distribution of siliceous sediments

                                                                                Distribution of siliceous sediments largely aligns with upwelling zones

                                                                                Silica cycling in an upwelling zone

                                                                                Dissolved silica is present in deep waters

                                                                                Silica is fixed in the mixed layer

                                                                                Silica upwells

                                                                                1

                                                                                2

                                                                                34Diatoms die and the

                                                                                silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                                This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                                Silica cycling in a coastal upwelling zone

                                                                                Dissolved silica is present in deep waters

                                                                                Silica is fixed in the mixed layer

                                                                                Silica upwells

                                                                                1

                                                                                2

                                                                                34

                                                                                Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                                5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                                This replenishes the SiO2 content of the water and can enhance its silica content

                                                                                Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                                Diatoms - plants

                                                                                Cell walls are composed of silicon (Si)- essentially glass

                                                                                Fixed this lecture

                                                                                bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                                goes logically through global and then to local coastal upwelling rather than back and forth

                                                                                • Nutrients their cycling and upwelling
                                                                                • Biolimiting constituents (aka nutrients)
                                                                                • Vertical distribution of nutrients
                                                                                • Slide Number 4
                                                                                • Light and nutrients determine where the productivity is
                                                                                • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                                • Productivity follows the nutrient availability
                                                                                • Oligotrophic ocean
                                                                                • New versus regenerated production
                                                                                • Cycling of nitrogen in the ocean
                                                                                • Nitrogen limitation and low oxygen
                                                                                • The simple Nitrogen cycle
                                                                                • Different oxidation states of nitrogen
                                                                                • The Nitrogen cycle- reality
                                                                                • Annual Stratification sequence
                                                                                • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                                • Cycling of nitrogen in the ocean
                                                                                • The Nitrogen cyclehellip when things get tough
                                                                                • Low oxygen and the ldquospoilersrdquo
                                                                                • The Nitrogen cyclehellip the spoilers
                                                                                • The Nitrogen cyclehellip the whole story
                                                                                • The Marine nitrogen cycle
                                                                                • The Eutrophic ocean
                                                                                • Vertical distribution of nutrients
                                                                                • Hydrocast gear
                                                                                • Deploying the CTD
                                                                                • Rigging the bottles
                                                                                • Water sampling
                                                                                • Drawing samples from the bottles
                                                                                • Processing the samples
                                                                                • Slide Number 31
                                                                                • Silica the upwelling nutrient
                                                                                • Slide Number 33
                                                                                • Vertical distribution of nutrients
                                                                                • The silica cycle (global view)
                                                                                • The biological pumphellip
                                                                                • The conveyor belt circulation
                                                                                • Slide Number 38
                                                                                • Silica the upwelling nutrient
                                                                                • Coastal Upwelling zones in the world ocean
                                                                                • Open ocean zones of upwelling hellip
                                                                                • Distribution of siliceous sediments
                                                                                • Silica cycling in an upwelling zone
                                                                                • Silica cycling in a coastal upwelling zone
                                                                                • Slide Number 45
                                                                                • Slide Number 46
                                                                                • Fixed this lecture

                                                                                  Distribution of siliceous sediments

                                                                                  Distribution of siliceous sediments largely aligns with upwelling zones

                                                                                  Silica cycling in an upwelling zone

                                                                                  Dissolved silica is present in deep waters

                                                                                  Silica is fixed in the mixed layer

                                                                                  Silica upwells

                                                                                  1

                                                                                  2

                                                                                  34Diatoms die and the

                                                                                  silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                                  This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                                  Silica cycling in a coastal upwelling zone

                                                                                  Dissolved silica is present in deep waters

                                                                                  Silica is fixed in the mixed layer

                                                                                  Silica upwells

                                                                                  1

                                                                                  2

                                                                                  34

                                                                                  Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                                  5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                                  This replenishes the SiO2 content of the water and can enhance its silica content

                                                                                  Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                                  Diatoms - plants

                                                                                  Cell walls are composed of silicon (Si)- essentially glass

                                                                                  Fixed this lecture

                                                                                  bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                                  goes logically through global and then to local coastal upwelling rather than back and forth

                                                                                  • Nutrients their cycling and upwelling
                                                                                  • Biolimiting constituents (aka nutrients)
                                                                                  • Vertical distribution of nutrients
                                                                                  • Slide Number 4
                                                                                  • Light and nutrients determine where the productivity is
                                                                                  • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                                  • Productivity follows the nutrient availability
                                                                                  • Oligotrophic ocean
                                                                                  • New versus regenerated production
                                                                                  • Cycling of nitrogen in the ocean
                                                                                  • Nitrogen limitation and low oxygen
                                                                                  • The simple Nitrogen cycle
                                                                                  • Different oxidation states of nitrogen
                                                                                  • The Nitrogen cycle- reality
                                                                                  • Annual Stratification sequence
                                                                                  • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                                  • Cycling of nitrogen in the ocean
                                                                                  • The Nitrogen cyclehellip when things get tough
                                                                                  • Low oxygen and the ldquospoilersrdquo
                                                                                  • The Nitrogen cyclehellip the spoilers
                                                                                  • The Nitrogen cyclehellip the whole story
                                                                                  • The Marine nitrogen cycle
                                                                                  • The Eutrophic ocean
                                                                                  • Vertical distribution of nutrients
                                                                                  • Hydrocast gear
                                                                                  • Deploying the CTD
                                                                                  • Rigging the bottles
                                                                                  • Water sampling
                                                                                  • Drawing samples from the bottles
                                                                                  • Processing the samples
                                                                                  • Slide Number 31
                                                                                  • Silica the upwelling nutrient
                                                                                  • Slide Number 33
                                                                                  • Vertical distribution of nutrients
                                                                                  • The silica cycle (global view)
                                                                                  • The biological pumphellip
                                                                                  • The conveyor belt circulation
                                                                                  • Slide Number 38
                                                                                  • Silica the upwelling nutrient
                                                                                  • Coastal Upwelling zones in the world ocean
                                                                                  • Open ocean zones of upwelling hellip
                                                                                  • Distribution of siliceous sediments
                                                                                  • Silica cycling in an upwelling zone
                                                                                  • Silica cycling in a coastal upwelling zone
                                                                                  • Slide Number 45
                                                                                  • Slide Number 46
                                                                                  • Fixed this lecture

                                                                                    Silica cycling in an upwelling zone

                                                                                    Dissolved silica is present in deep waters

                                                                                    Silica is fixed in the mixed layer

                                                                                    Silica upwells

                                                                                    1

                                                                                    2

                                                                                    34Diatoms die and the

                                                                                    silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                                    This replenishes the SiO2 content of the water locally and can enhance its silica content

                                                                                    Silica cycling in a coastal upwelling zone

                                                                                    Dissolved silica is present in deep waters

                                                                                    Silica is fixed in the mixed layer

                                                                                    Silica upwells

                                                                                    1

                                                                                    2

                                                                                    34

                                                                                    Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                                    5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                                    This replenishes the SiO2 content of the water and can enhance its silica content

                                                                                    Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                                    Diatoms - plants

                                                                                    Cell walls are composed of silicon (Si)- essentially glass

                                                                                    Fixed this lecture

                                                                                    bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                                    goes logically through global and then to local coastal upwelling rather than back and forth

                                                                                    • Nutrients their cycling and upwelling
                                                                                    • Biolimiting constituents (aka nutrients)
                                                                                    • Vertical distribution of nutrients
                                                                                    • Slide Number 4
                                                                                    • Light and nutrients determine where the productivity is
                                                                                    • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                                    • Productivity follows the nutrient availability
                                                                                    • Oligotrophic ocean
                                                                                    • New versus regenerated production
                                                                                    • Cycling of nitrogen in the ocean
                                                                                    • Nitrogen limitation and low oxygen
                                                                                    • The simple Nitrogen cycle
                                                                                    • Different oxidation states of nitrogen
                                                                                    • The Nitrogen cycle- reality
                                                                                    • Annual Stratification sequence
                                                                                    • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                                    • Cycling of nitrogen in the ocean
                                                                                    • The Nitrogen cyclehellip when things get tough
                                                                                    • Low oxygen and the ldquospoilersrdquo
                                                                                    • The Nitrogen cyclehellip the spoilers
                                                                                    • The Nitrogen cyclehellip the whole story
                                                                                    • The Marine nitrogen cycle
                                                                                    • The Eutrophic ocean
                                                                                    • Vertical distribution of nutrients
                                                                                    • Hydrocast gear
                                                                                    • Deploying the CTD
                                                                                    • Rigging the bottles
                                                                                    • Water sampling
                                                                                    • Drawing samples from the bottles
                                                                                    • Processing the samples
                                                                                    • Slide Number 31
                                                                                    • Silica the upwelling nutrient
                                                                                    • Slide Number 33
                                                                                    • Vertical distribution of nutrients
                                                                                    • The silica cycle (global view)
                                                                                    • The biological pumphellip
                                                                                    • The conveyor belt circulation
                                                                                    • Slide Number 38
                                                                                    • Silica the upwelling nutrient
                                                                                    • Coastal Upwelling zones in the world ocean
                                                                                    • Open ocean zones of upwelling hellip
                                                                                    • Distribution of siliceous sediments
                                                                                    • Silica cycling in an upwelling zone
                                                                                    • Silica cycling in a coastal upwelling zone
                                                                                    • Slide Number 45
                                                                                    • Slide Number 46
                                                                                    • Fixed this lecture

                                                                                      Silica cycling in a coastal upwelling zone

                                                                                      Dissolved silica is present in deep waters

                                                                                      Silica is fixed in the mixed layer

                                                                                      Silica upwells

                                                                                      1

                                                                                      2

                                                                                      34

                                                                                      Diatoms die and the silica tests sink to the sediments while dissolving and may begin to release SiO2

                                                                                      5 Silica dissolves in the sediments releasing SiO2 to the overlying water

                                                                                      This replenishes the SiO2 content of the water and can enhance its silica content

                                                                                      Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                                      Diatoms - plants

                                                                                      Cell walls are composed of silicon (Si)- essentially glass

                                                                                      Fixed this lecture

                                                                                      bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                                      goes logically through global and then to local coastal upwelling rather than back and forth

                                                                                      • Nutrients their cycling and upwelling
                                                                                      • Biolimiting constituents (aka nutrients)
                                                                                      • Vertical distribution of nutrients
                                                                                      • Slide Number 4
                                                                                      • Light and nutrients determine where the productivity is
                                                                                      • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                                      • Productivity follows the nutrient availability
                                                                                      • Oligotrophic ocean
                                                                                      • New versus regenerated production
                                                                                      • Cycling of nitrogen in the ocean
                                                                                      • Nitrogen limitation and low oxygen
                                                                                      • The simple Nitrogen cycle
                                                                                      • Different oxidation states of nitrogen
                                                                                      • The Nitrogen cycle- reality
                                                                                      • Annual Stratification sequence
                                                                                      • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                                      • Cycling of nitrogen in the ocean
                                                                                      • The Nitrogen cyclehellip when things get tough
                                                                                      • Low oxygen and the ldquospoilersrdquo
                                                                                      • The Nitrogen cyclehellip the spoilers
                                                                                      • The Nitrogen cyclehellip the whole story
                                                                                      • The Marine nitrogen cycle
                                                                                      • The Eutrophic ocean
                                                                                      • Vertical distribution of nutrients
                                                                                      • Hydrocast gear
                                                                                      • Deploying the CTD
                                                                                      • Rigging the bottles
                                                                                      • Water sampling
                                                                                      • Drawing samples from the bottles
                                                                                      • Processing the samples
                                                                                      • Slide Number 31
                                                                                      • Silica the upwelling nutrient
                                                                                      • Slide Number 33
                                                                                      • Vertical distribution of nutrients
                                                                                      • The silica cycle (global view)
                                                                                      • The biological pumphellip
                                                                                      • The conveyor belt circulation
                                                                                      • Slide Number 38
                                                                                      • Silica the upwelling nutrient
                                                                                      • Coastal Upwelling zones in the world ocean
                                                                                      • Open ocean zones of upwelling hellip
                                                                                      • Distribution of siliceous sediments
                                                                                      • Silica cycling in an upwelling zone
                                                                                      • Silica cycling in a coastal upwelling zone
                                                                                      • Slide Number 45
                                                                                      • Slide Number 46
                                                                                      • Fixed this lecture

                                                                                        Siliceous phyto planktonDiatoms radiolarians silicoflagellates

                                                                                        Diatoms - plants

                                                                                        Cell walls are composed of silicon (Si)- essentially glass

                                                                                        Fixed this lecture

                                                                                        bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                                        goes logically through global and then to local coastal upwelling rather than back and forth

                                                                                        • Nutrients their cycling and upwelling
                                                                                        • Biolimiting constituents (aka nutrients)
                                                                                        • Vertical distribution of nutrients
                                                                                        • Slide Number 4
                                                                                        • Light and nutrients determine where the productivity is
                                                                                        • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                                        • Productivity follows the nutrient availability
                                                                                        • Oligotrophic ocean
                                                                                        • New versus regenerated production
                                                                                        • Cycling of nitrogen in the ocean
                                                                                        • Nitrogen limitation and low oxygen
                                                                                        • The simple Nitrogen cycle
                                                                                        • Different oxidation states of nitrogen
                                                                                        • The Nitrogen cycle- reality
                                                                                        • Annual Stratification sequence
                                                                                        • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                                        • Cycling of nitrogen in the ocean
                                                                                        • The Nitrogen cyclehellip when things get tough
                                                                                        • Low oxygen and the ldquospoilersrdquo
                                                                                        • The Nitrogen cyclehellip the spoilers
                                                                                        • The Nitrogen cyclehellip the whole story
                                                                                        • The Marine nitrogen cycle
                                                                                        • The Eutrophic ocean
                                                                                        • Vertical distribution of nutrients
                                                                                        • Hydrocast gear
                                                                                        • Deploying the CTD
                                                                                        • Rigging the bottles
                                                                                        • Water sampling
                                                                                        • Drawing samples from the bottles
                                                                                        • Processing the samples
                                                                                        • Slide Number 31
                                                                                        • Silica the upwelling nutrient
                                                                                        • Slide Number 33
                                                                                        • Vertical distribution of nutrients
                                                                                        • The silica cycle (global view)
                                                                                        • The biological pumphellip
                                                                                        • The conveyor belt circulation
                                                                                        • Slide Number 38
                                                                                        • Silica the upwelling nutrient
                                                                                        • Coastal Upwelling zones in the world ocean
                                                                                        • Open ocean zones of upwelling hellip
                                                                                        • Distribution of siliceous sediments
                                                                                        • Silica cycling in an upwelling zone
                                                                                        • Silica cycling in a coastal upwelling zone
                                                                                        • Slide Number 45
                                                                                        • Slide Number 46
                                                                                        • Fixed this lecture

                                                                                          Fixed this lecture

                                                                                          bull Fix this lecturebull The video is broken find a new onebull The Silica portion needs revision so that it

                                                                                          goes logically through global and then to local coastal upwelling rather than back and forth

                                                                                          • Nutrients their cycling and upwelling
                                                                                          • Biolimiting constituents (aka nutrients)
                                                                                          • Vertical distribution of nutrients
                                                                                          • Slide Number 4
                                                                                          • Light and nutrients determine where the productivity is
                                                                                          • Seasonal evolution of mixed layer (physics) sets up the annual cycle of the biologyhellip
                                                                                          • Productivity follows the nutrient availability
                                                                                          • Oligotrophic ocean
                                                                                          • New versus regenerated production
                                                                                          • Cycling of nitrogen in the ocean
                                                                                          • Nitrogen limitation and low oxygen
                                                                                          • The simple Nitrogen cycle
                                                                                          • Different oxidation states of nitrogen
                                                                                          • The Nitrogen cycle- reality
                                                                                          • Annual Stratification sequence
                                                                                          • The Nitrogen cyclehellip when nutrients are low the saviors come along
                                                                                          • Cycling of nitrogen in the ocean
                                                                                          • The Nitrogen cyclehellip when things get tough
                                                                                          • Low oxygen and the ldquospoilersrdquo
                                                                                          • The Nitrogen cyclehellip the spoilers
                                                                                          • The Nitrogen cyclehellip the whole story
                                                                                          • The Marine nitrogen cycle
                                                                                          • The Eutrophic ocean
                                                                                          • Vertical distribution of nutrients
                                                                                          • Hydrocast gear
                                                                                          • Deploying the CTD
                                                                                          • Rigging the bottles
                                                                                          • Water sampling
                                                                                          • Drawing samples from the bottles
                                                                                          • Processing the samples
                                                                                          • Slide Number 31
                                                                                          • Silica the upwelling nutrient
                                                                                          • Slide Number 33
                                                                                          • Vertical distribution of nutrients
                                                                                          • The silica cycle (global view)
                                                                                          • The biological pumphellip
                                                                                          • The conveyor belt circulation
                                                                                          • Slide Number 38
                                                                                          • Silica the upwelling nutrient
                                                                                          • Coastal Upwelling zones in the world ocean
                                                                                          • Open ocean zones of upwelling hellip
                                                                                          • Distribution of siliceous sediments
                                                                                          • Silica cycling in an upwelling zone
                                                                                          • Silica cycling in a coastal upwelling zone
                                                                                          • Slide Number 45
                                                                                          • Slide Number 46
                                                                                          • Fixed this lecture

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