2015-03-Final Bench to Bedside Talk - Revised - Shortened.pptx
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Nutrient Sensing, Acetyla2on, Mitochondrial Quality Control and Pathology
Michael N. Sack Cardiovascular and Pulmonary Branch Na4onal Heart, Lung and Blood Ins4tute
Talk Outline
• Caloric Load, Sirt3 and the Regula2on of Protein Acetyla2on • Fas2ng and Tylenol Liver Toxicity
• Sirtuin Biology and Mitochondrial Quality Control • The Role of Fas2ng and Sirt3 on NLRP3 Inflammasome Biology
Nutrient excess, obesity and disease burden
Malik et al, Nat. Rev. Endocrinology 2013
Nutrient overload orchestrate growth programing, in part, via protein acetyla2on and glycosyla2on
Wellen and Thompson, Nature Reviews Mol. Cell. Biol. 2012
Lysine Acetyla2on: an emerging post-‐transla2onal modifica2on
Timeline
1968-‐acetyla4on of histones discovered
1997: 1st non-‐histone acetylated protein-‐p53
Before 2006: <90 proteins are known to be acetylated
2006: 195 acetylated proteins (Kim et al. Mol. Cell)
2009: 1750 acetylated proteins (Choudhary et al. Science)
2013: > 2000 acetylated proteins 133 mitochondrial proteins (195 total) 20% of mitochondrial proteins
Nutrient availability dependent mitochondrial protein acetyla2on
I
Kendrick et al, Biochem. J. 2011
High Fat Feeding
Hepa2c Mitochondrial Proteins
Fed/Fas2ng Comparison
Kim et al, Molecular Cell, 2006
Acetyla2on and deacetyla2on are enzyma2cally regulated
ScoX (2012) Essays Biochem.
Sirtuins: NAD+-‐dependent deacetylases
Mammals express seven Sirtuins (Sirt 1-‐7)
Various cellular localiza2ons:
Sirt1 & 2: nuclear and cytosolic Sirt3-‐5: mitochondrial Sirt6 & 7: nuclear
NAD+-‐dependent deacetyla2on ADP Ribosyla2on ac2vity (Sirt4
& 6)
Yang XJ et al, Nat Review Mol. Cell Biol. 2008;9:206-18
Sirt3 func2ons as the nutrient-‐sensi2ve mitochondrial lysine deacetylase
Hirschey et al, Nature (2010)
Bao J et al. Free Radical Biol. and Med. (2010)
Lombard et al. (2007) Mol. Biol. Cell
Recent fasting was more common than recent alcohol use among those who suffered hepatotoxicity after a dose of 4 to 10 g of acetaminophen per day (P=.02). Recent alcohol use was more common in the group who took more than 10 g/d than in those who took 4 to 10 g/d (P=.004). Conclusion: Acetaminophen hepatotoxicity after a dose of 4 to 10 g/d was associated with fasting and less commonly with alcohol use. Patients who developed hepatoxicity after taking acetaminophen doses of greater than 10 g/d for therapeutic purposes were alcohol users. Acetaminophen hepatotoxicity after an overdose appears to be enhanced by fasting in addition to alcohol ingestion.
Acetaminophen toxic metabolites can bind to lysine residues
Whether this plays a role in hepatotoxicity is unknown
NAPQI -‐ N-‐acetyl-‐p-‐benzoquine-‐imine
Hypothesis
The level of mitochondrial protein acetyla2on modulates suscep2bility to acetaminophen
liver injury
This may be mediated in part by modula2ng NAPQI binding to mitochondrial proteins?
10 x WT 10 x KO
SIRT3 KO mice are resistant to acetaminophen-‐induced liver injury
APAP 350mg/kg IP administration N-acetyl-p-aminophenol
SIRT3+/+ SIRT3-/-
*
Iden2fica2on and characteriza2on of novel substrates of SIRT3 in the murine liver
2D gel ko
2D gel wt
2D gel wt
2D gel
membrane
x-filmmembrane
x-filmmembraneblot
blot
stain
stain
cut spots
MS
2D gel ko
2D gel wt
2D gel wt
2D gel
membrane
x-filmmembrane
x-filmmembraneblot
blot
stain
stain
cut spots
MS
2D gel and MS to ID hyper-acetylated mitochondrial proteins
ID poten2al targets
Representa2ve 2-‐D gels employing an an2body directed against acetylated lysine-‐residues
1 2 3 4 5
6
7
8 9
10
11
12 13
14
150 75
25
kDa
pH 3 - 10
SIRT3+/+
SIRT3-/-
150 75
25
ALDH2
SIRT3+/+
SIRT3-/-
Ac- K
ALDH2
Major ALDH2 metabolic pathways
Catalyze the oxidation of aldehydes
Acetaldehyde
Acetate
NAD+
NADH
trans-4-hydroxy-2-nonenal (4-HNE)
Lipid peroxidation produces α,β-unsaturated hydroxyalkenal
Ethanol oxidation
Carboxylates
Mitochondrial ALDH2 is a direct target of the toxic acetaminophen metabolite -‐ NAPQI
Landin JS, et al. Toxicology and Applied Pharmacology 1996;141:299-307
Is this interaction integral to APAP hepatotoxicity?
ALDH2 is a substrate for Sirt3 Deacetyla2on
ALDH2 func2on is preserved in fas2ng Sirt3 KO mice
Hepa2c shRNA knockdown of ALDH2 negates acetaminophen ‘resilience’ in SIRT3 -‐/-‐ mice
Sirt3-‐dependent acetyla2on status modulates NAPQI binding to ALDH2
Iden2fica2on of ALDH2-‐ K377 as the func2onal residue for NAPQI binding
Iden2fica2on of an allosteric role of lysine deacetyla2on in fas2ng suscep2bility to acetaminophen injury
Lu et al. EMBO Reports 2011
Talk Outline
• Caloric Load, Sirt3 and the Regula2on of Protein Acetyla2on • Fas2ng and Tylenol Liver Toxicity
• Sirtuin Biology and Mitochondrial Quality Control • The Role of Fas2ng and Sirt3 on NLRP3 Inflammasome Biology
SuXerwala et al. (2014) Ann N Y Acad Sci
Inflammasome: Mul4protein intracellular complex that sense pathogen / damage associated molecular paXerns (PAMPS/DAMPs) and ac4vate caspase-‐1, which in turn cleaves/ac4vates pro-‐inflammatory cytokines IL-‐1β and IL-‐18.
Defining the Inflammasome Program
NLRP -‐ Nod-‐like receptor family protein ASC -‐ Adaptor apoptosis-‐associated speck-‐like protein containing a CARD and pyrin domain (PYD)
SuXerwala et al. (2014) Ann N Y Acad Sci
NLRP3 Inflammasome: -‐ Mul4ple triggers (‘sterile inflamma2on’) –
asthma, atherosclerosis, DM and aging -‐ Regulated at the transcript and post-‐transla4onal
levels:
Priming: Transcrip4onal induc4on of genes encoding components of the NLRP3 complex. Ac2va2on: Complex ac4va4on by stress-‐signals -‐ ATP, nigericin, faXy acids & cholesterol crystals.
1) Priming: LPS
2) Ac2va2on: ATP
The NLRP3 Inflammasome Program
Mar2non, Immunity 2012
Mitochondrial Disrup2on as a Disease Associated Molecular Pafern (DAMP) in NLRP3 Ac2va2on
Evolu2onary endosymbionts unmethylated CpG mo2fs
(mito rRNA and tRNA) N-‐formyl pep2des
Sirt1 and Sirt3 Deacetylase Enzymes
Sack MN and Finkel T. Cold Spring Harb Perspect Biol 2012
Modulate Mitochondrial Func2on/Quality (Caloric Restric2on/Fas2ng)
Can Mitochondrial Sirtuins Regulate the NLRP3 Inflammasome?
Is this Dependent on the
Modula2on of Mitochondrial Homeostasis?
Fas2ng (caloric restric2on mime2c) suppresses the NLRP3 inflammasome?
F e d
F a s ted
0 .0
0 .5
1 .0
1 .5M o u s e p e rito n e a l m F
IL -1b
IL-1
b r
ele
as
e(r
ela
tiv
e t
o t
he
fe
d s
tate
)
* There is a 40 % decrease in the release of IL-‐1β afer fas4ng
NLRP3 ac2va2on is modulated by Sirt3
* Only the mitochondrial sirtuin Sirt3 appears to regulate the NLRP3 inflammasome in human THP-‐1 macrophages.
And in mouse in vivo:
WT
Sirt3 K
O
WT faste
d
Sirt3 K
O faste
d
0.5
1.0
1.5Mouse peritoneal mΦ
IL-1β
Cyt
okin
e re
leas
e(r
elat
ive
to th
e W
T)
* + + + +-‐ + -‐ +
LPS
WT Sirt3 KO
ATP
CleavedCasp-‐1
A B C
+ + + +-‐ + -‐ +
LPS
WT Sirt3 KO
ATP
CleavedCasp-‐1
A B C
+ + + +-‐ + -‐ +
LPS
WT Sirt3 KO
ATP
CleavedCasp-‐1
A B C
+ + + +-‐ + -‐ +
LPS
WT Sirt3 KO
ATP
CleavedCasp-‐1
A B C
+ + + +-‐ + -‐ +
LPS
WT Sirt3 KO
ATP
CleavedCasp-‐1
A B C
Sirt3
IL-‐1β
NLRP3
ASC
Actin
-‐ + + -‐ + +-‐ -‐ + -‐ -‐ +
LPS
WT Sirt3 KO
ATP
A B C
Sirt3
IL-‐1β
NLRP3
ASC
Actin
-‐ + + -‐ + +-‐ -‐ + -‐ -‐ +
LPS
WT Sirt3 KO
ATP
A B CFasted Fed
Sirt3
IL-‐1β
NLRP3
ASC
Actin
-‐ + + -‐ + +-‐ -‐ + -‐ -‐ +
LPS
WT Sirt3 KO
ATP
A B CFasted Fed
C o n trol
+ Sir t
3
+ H/Y
mu ta
n t0 .0
0 .5
1 .0
1 .5 T H P -1
Cy
tok
ine
re
lea
se
(re
lati
ve
to
th
e c
on
tro
l)
*
The role of Sirt3 in NLRP3 inflammasome regula2on is confirmed in Bone Marrow Derived Macrophages
*
Mitochondrial Homeosta2c Role of Sirt3
Gira
lt A et a
l. Bioche
m J, 201
2
Improve Energe2cs Decrease ROS MPT Resistance
Diminished Apoptosis Enhanced Mitophagy
WT L
P S
WT L
P S + A
T P
S ir t3 K
O L
P S
S ir t3 K
O L
P S + A
T P
0
2
4
6
8
1 0
Cy
tos
olic
mtD
NA
(F
old
ch
an
ge
)
*
U n t L P S + A T P R o te n o n e0
1
2
3
4
5
Mit
os
ox
in
ten
sit
y
S c rshRNAS ir t3shRNA
The counter-‐regulatory control of mitochondrial protein acetyla2on
Sirt3 levels are increased with fas2ng
Hirschey et al, Nature 2010
Gcn5L1 levels are decreased with fas2ng
Webster B et al. J. Cell Science (2013)
Sirt3
Gcn5L1
ScoX I, et al. Biochem J. 2012
Counter-‐regulatory roles of Gcn5L1 and Sirt3 on mitochondrial acetyla2on and func2on
ScoX I, et al. Biochem J. 2012
Mitochondrial Protein Acetyla2on
Webster B, ScoX I. J Cell Sci 2013
Modula2on of Mitophagy
Gcn5L1 and Sirt3 deple2on have counter-‐regulatory effects on the NLRP3 inflammasome
Traba J, et al. Unpublished Data
J774A.1 cells
Mitochondrial phenotype in J774A.1 macrophages
Traba J, et al. Unpublished Data
CLINICAL RESEARCH PROJECT Protocol # 14-‐H-‐0103
NHLBI Protocol: Pilot Study to Evaluate the Effect of Fas5ng on the NLRP3 Inflammasome
00 .1 1
0
1
2
3
4
5IL -1b
L P S (n g /m L )
Cy
tok
ine
re
lea
se
(re
lati
ve
to
th
e f
as
ted
sta
te)
F a s te d
F e d 1 h
F e d 3 h
0 .1 1
0 .8
1 .0
1 .2
1 .4 IL -1b
L P S (n g /m L )
Cy
tok
ine
re
lea
se
(re
lati
ve
to
th
e f
as
ted
sta
te)
F a s te d
F e d 1 h
F e d 3 h
Fas2ng Blunts the NLRP3 inflammasome in Human Subjects
Conclusions
• The NLRP3 inflammasome is blunted by fas2ng
• NLRP3 inflammasome ac2va2on is nutrient-‐level dependent and appears to be modulated, in part, by the Sirt3 -‐Gcn5L1 regulatory program
• Preliminary data suggest that that fas2ng and the mitochondrial acetyla2on regulatory program modifies the role of mitochondria as a DAMP in NLRP3 ac2va2on
• This nutrient-‐sensing program is opera2onal in healthy human subjects
Mito protein
SIRT3
AC
Ac ↓
GCN5L1
Mitochondrial Homeostasis
↑ SIRT3
Ac Fas2ng or
CR
Acknowledgements
NHLBI Laboratory of Mitochondrial Biology Kim Han
Shahin Hassanzadeh Javier Traba Komudi Singh Lingdi Wang Jing Wu Jessica Li
Miriam Kwarteng-‐Siaw
Prior Laboratory Members Zhongping Lu Iain ScoX
Brad Webster
NIAMS Richard Siegel
NHLBI
Marjan Gucek Lance Pohl
Expert Opin. Drug Metab. Toxicol. (2008) 4(11)
NAPQI adducts covalently bind to cysteine residues on mitochondrial proteins contributing to hepatic
toxicity
NAPQI adducts increase The mass of a peptide by 149Da
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