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Adventures with the Jack of all Trades Attaching experiments to your computational laboratory Trey Ideker UC San Diego
8

ISMB trainee workshop2016

Feb 20, 2017

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Lucia Peixoto
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Page 1: ISMB trainee workshop2016

Adventures with the

Jack of all TradesAttaching experiments to your

computational laboratory

Trey Ideker UC San Diego

Page 2: ISMB trainee workshop2016
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Benefits of an experimental laboratory

•Puts you in touch with biology like no other method – CS connections are seen naturally•Puts you in control of your experimental design•Puts you in control of your validation•Way harder to get scooped

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Frustrations• Needs massive investment of your time. Debugging lab work

is slow!

• Need to obtain the necessary space and money.

• Need to expand focus = more to worry about.

• Curse of the ‘Jack of all trades’ – Specialized biologist collaborators will always be better than you

• Specialized computer science collaborators will always be better than you

Page 8: ISMB trainee workshop2016

Other ModelsHost lab

1:1 collaborations

Many:many collaborations (consortia)