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Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem
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Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

Apr 01, 2015

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Page 1: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

BeispielbildThe EDIT Platform for Cybertaxonomy

Anton Güntsch Freie Universität Berlin

Botanic Garden and Botanical Museum Berlin-Dahlem

Page 2: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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The EDIT Platform for Cybertaxonomy

Güntsch: The EDIT Platform for Cybertaxonomy

Development started by the NoE EDIT (European Distributed Institute of Taxonomy)

Create a collection of tools and services which together cover all aspects of the taxonomic workflow. The workflow is grouped into the following areas (taxonomic editing; publishing of edited data; data storage and exchange; collections and specimens; descriptions; fieldwork; literature; and geography).

Page 3: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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The Common Data Model (CDM)

Güntsch: The EDIT Platform for Cybertaxonomy

Agreed

Standards-aware

Comprehensive

Highly granular

Page 4: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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The Common Data Model (CDM)

Güntsch: The EDIT Platform for Cybertaxonomy

The CDM covers

Names

Literature references

Classifications (multiple!)

Media

Specimens

Descriptive data

Geographic data

Species-related content of any kind (economic uses, conservation status, …)

Page 5: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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Platform architecture: levels and roles

Güntsch: The EDIT Platform for Cybertaxonomy

CDM Store in Database System (mySQL, MS-SQL Server, …)

Functions

EDIT CDM Programming Library

Data Access

API Web Services

User InterfaceUser Software

USER

APPLICATION DEVELOPER

SYSTEM ADMINISTRATOR

EDIT CDM OPEN SOURCE

DEVELOPER COMMUNITY

Page 6: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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The EDIT “Cybergate”

Güntsch: The EDIT Platform for Cybertaxonomy

Page 7: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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Installation scenarios

Güntsch: The EDIT Platform for Cybertaxonomy

Page 8: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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The Taxonomic Editor

Güntsch: The EDIT Platform for Cybertaxonomy

Page 9: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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Portals: Flora of Cyprus

Güntsch: The EDIT Platform for Cybertaxonomy

Page 10: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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Portals: PalmWeb

Güntsch: The EDIT Platform for Cybertaxonomy

Page 11: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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Portals: Cichorieae

Güntsch: The EDIT Platform for Cybertaxonomy

Page 12: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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Other applications

Güntsch: The EDIT Platform for Cybertaxonomy

ViBRANT Index

Central data store for Euro+Med and Fauna Europaea

Integrated Collection Information System (Campanula, German Research Foundation Project)

Page 13: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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ViBRANT Index (1)

Güntsch: The EDIT Platform for Cybertaxonomy

Page 14: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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ViBRANT Index (2)

Güntsch: The EDIT Platform for Cybertaxonomy

Page 15: Beispielbild The EDIT Platform for Cybertaxonomy Anton Güntsch Freie Universität Berlin Botanic Garden and Botanical Museum Berlin-Dahlem.

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Anton GüntschFreie Universität Berlin

Botanic Garden & Bot. Museum Berlin-DahlemDept. Biodiversity Informatics & Laboratories

Königin-Luise-Straße 6-8D-14195 Berlin-Dahlem

[email protected]

www.bgbm.org/biodivinf

Güntsch: The EDIT Platform for Cybertaxonomy