Chapter 1-1 Chem 61 What is it? Why is it a two semester course? Why is it important to careers in health care? Organic chemistry is essential to the understanding of the intricate details of life The interactions and reactions of organic molecules are what define living systems. One needs to understand bonding, structure, properties, reactions, and synthesis to understand natural systems. CHAPTER 1 INTRODUCTION Organic Chemistry: the study of carbon compounds... organic compounds contain the elements C, H, N, O, S, Cl, Br, etc. Organic compounds were originally thought to come only from living organisms...thus the term organic (until about 1830) Inorganic compounds were all those which came from non-living sources Scientists thought a vital force was necessary to produce organic compounds and that they could not be synthesized in the lab. In 1828 Fredreich Woeller synthesized urea, an organic compound excreted as waste, from ammonium cyanate, and vitalism slowly died out. Organic compounds range from methane , CH 4 (natural gas) to DNA, the genetic coding material, and taxol, a plant derived substance which is a potential anticancer agent. Organic chemistry is fundamental to many scientific disciplines...biochemistry, polymer chemistry, microbiology, botany, pharmacy, medicine...since living systems are composed primarily of organic compounds and water. What is Organic Chemistry? Organic Chemistry
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Chapter 1-1 Chem 61
What is it? Why is it a two semester course? Why is it important to careers in health care?
Organic chemistry is essential to the understanding of the intricate details of life The interactions and reactions of organic molecules are what define living systems.
One needs to understand bonding, structure, properties, reactions, and synthesis to understand natural systems.
CHAPTER 1
INTRODUCTION
Organic Chemistry: the study of carbon compounds...
organic compounds contain the elements C, H, N, O, S, Cl, Br, etc.
Organic compounds were originally thought to come only from living organisms...thus the term organic (until about 1830)
Inorganic compounds were all those which came from non-living sources
Scientists thought a vital force was necessary to produce organic compounds and that they could not be synthesized in the lab.
In 1828 Fredreich Woeller synthesized urea, an organic compound excreted as waste, from ammonium cyanate, and vitalism slowly died out.
Organic compounds range from methane , CH4 (natural gas) to DNA, the genetic coding material, and taxol, a plant derived substance which is a potential anticancer agent.
Organic chemistry is fundamental to many scientific disciplines...biochemistry, polymer chemistry, microbiology, botany, pharmacy, medicine...since living systems are composed primarily of organic compounds and water.
What is Organic Chemistry?
Organic Chemistry
Chem 61Chapter 1-2 Electronic Structure of Carbon
STRUCTURAL THEORY AND BONDING
Carbon is intermediate in electronegativity, therefore it neither completelydonates or completely accepts electrons. As a result it forms covalent bonds to itself and other atoms. It can bond to itself to form chains andrings...catenation. This allows the formation of a staggering number of organiccompounds. 95% of all known compounds are organic.
ATOMIC STRUCTURE
It is important to understand molecular structure to understand reactivity oforganic compounds. Molecular structure depends on atomic structure.
Atomic structure of carbon C: 1s22s22p2
that is, carbon has 2 electrons in the lowest energy level, the 1s orbital 2 electrons in the next energy level, the 2s orbital 2 electrons in the third energy level, the 2p orbital
1s, 2s, 2p orbitals
1s is spherical with the same phase throughout
2s is spherical with a node node is where ψ2 = 0
2p... three orbitals of equal energy (degenerate)
2px 2py 2pz
node
1s
2s
Chapter 1-3 Chem 61Rules for Electronic Configuration
Pauli Exclusion Principle: Maximum of two electrons per orbital.
Electrons have a spin of +1/2 or -1/2 which gives rise to a small magnetic field since electrons are charged.
Repulsion between the electrons is reduced if they have opposite spins and thus opposite magnetic moments.
If two electrons occupy the same orbital they must have opposite spins or be paired.
Aufbau Principle: orbitals are filled from lower to higher energy
4s __3p __ __ __3s __2p __ __ __ order of filling of atomic orbitals2s __1s __
THUS: Li 1s22s1
Hund's Rule: orbitals of equal energy (degenerate) receive one electron until there is one electron in each orbital: then pairing of electrons begins.
THUS: C 1s22s22px12py1
Chapter 1-4 Chem 61Atomic Radius and Electronegativity
ATOMIC RADIUS
Atomic Radius: distance between the nucleus and the outermost electrons (valence electrons) or one half the bondlength of a diatomic molecule
H—H bond length is 0.74Å, atomic radius is 0.37Å Atomic radius increases with increasing number of electron shells within an atom and decreases with the increase in the number of protons within an atom
Thus atomic radius decreases from left to right within the same row of the periodic table (increasing number of protons in the nucleus) and increases from top to bottom within a group of the periodic table (increasing number of electronic shells)
ELECTRONEGATIVITY Electronegativity: a measure of an atom's attraction for outer bonding electrons
Electronegativity increases with increasing charge on the nucleus and with decreasing distance between the nucleus and the electrons
Thus electronegativity increases from left to right within a row of the periodic table and from bottom to top within a group in the periodic table
C HH
HH
Chapter 1- 5
C::OH
H
Chem 61Chemical Bonding
4H + :C:
CHEMICAL BONDING
G.N. Lewis put forth the first explanation of the nature of the chemical bond.
Ionic Bond..one or more electrons is completely transferred from one atom to another creating ions: a cation (positively charged) and an anion (negatively charged).
the ions are held together by electrostatic attractions
ionic bonds generally occur between atoms of highly different electronegativies. e.g.
C O N H
Covalent Bond...one or more electrons is shared by atoms...atomic orbitals merge into shared or molecular orbitals covalent bonds are usually formed between atoms of similar electronegativities
since carbon is intermediate in electronegativity it usually forms covalent bonds
Generally...atoms not having the noble gas configuration tend to form bonds such that each atom may obtain the stable noble gas electronic configuration [OCTET RULE]
Nao – e– Na+ + e–
Clo + e– Cl –
Nao + Clo Na+Cl –
Atoms of the elements of organic compounds can form a fixed number of bonds.
single bond double bond triple bond
H:C:::C:H
..
..
..
Chapter 1- 6 Chem 61Chemical Bonding
.
COVALENT BONDS
Bond lengths: the distance between two covalently bonded nuclei Bond angle: the angle formed between two covalent bonds
Bond dissociation energy: the energy required for homolytic cleavage of a bond;
Cl Cl
H3C H H3C + H
Cl + Cl
Heterolytic cleavage: cleavage of a bond to give a cation and an anion; one atom which is part of the covalent bond retains both electrons from the bond
∆H (change in enthalpy) for homolytic cleavage of many covalent bonds has been determined
covalent bonds between atoms of similar electronegativities are said to be nonpolar bonds since each atom shares the electrons of the bond approximately equally
H—H CH3—CH3
if atoms of different electronegativities form a covalent bond, the more electronegative atom will have a stronger attraction for the electrons and polarize the bond giving a polar covalent bond in which one atom is partially negatively (δ–)charged and one atom is partially positively charged (δ+)
H3C—Cl H—Cl H2C=O H3C—OH CH3—NH2
If any entire molecule has an overall dipole, then the molecule is said to be polar.
CCl4...nonpolar, polar covalent bonds cancel each other because of tetrahedral symmetry
HCCl3...polar
H2O, NH3...very polar
δ+ δ− δ+ δ− δ+ δ−
δ_
δ+ δ+
δ_
δ+
δ+
δ_
δ_
δ_
dipoles cancel
dipoles add dipoles addδ+δ_
Chapter 1-8 Chem 61Polar Covalent Bonds
O H :N
N H :O
ATTRACTIONS BETWEEN MOLECULES
ion-ion forces: the attraction between oppositely charged ions and repulsion between like charges very strong...not often encountered in organic compounds
van der Waals forces: all dipole-dipole forces are both repulsive and attractive... the distance at which the repulsive forces are minimized and the attractive forces are maximized is called the van der Waals radius
Induced dipole-dipole interactions or London forces: small temporary dipoles occur and induce dipoles in another molecule due to small uneven distribution of electron density.
Dipole-dipole interactions: permanent dipoles in molecules attract or repel
Hydrogen bonding: a specific type of dipole-dipole interaction; very strong
occur only between a hydrogen atom bonded to an electronegative atom O, N, S and a lone pair on O, N, S
N H :N
Intermolecular hydrogen bonds increase the boiling points of compounds and increase their solubility in water.
Hydrogen bonds also can influence the shapes of biomolecules by internal hydrogen bonding as well as hydrogen bonding between molecules.
O H :O
7 kcal /mole
2 kcal/mole
3 kcal/mole
5 kcal/mole
Chapter 1-9 Chem 61Formulas and Formal Charge
CHEMICAL FORMULAS
empirical formula: gives the types and ratios of atoms in a molecule
molecular formula: gives the type and actual number of atoms
structural formula: gives the type, number and attachment of atoms...the actual structure
for example: hexane: C6H14 C3H7 CH3CH2CH2CH2CH2CH3
molecular formula empirical formula structural formula
LEWIS STRUCTURES
1. draw the molecular skeleton2. count the number of available valence electrons (be sure to account for any overall charge on the species)3. draw covalent bonds between all the atoms giving as many as possible an octet (duet for hydrogen)4. assign charges in the molecule
FORMAL CHARGE
formal charge on an atom = # valence electrons - # shared pairs of electrons - # unshared electrons
HNO3 Lewis structure: N...5-4-0 = +1O1...6-2-4 = 0O2...6-1-6 = -1O3...6-2-4 = 0H...1-1 = O
Lewis Structures: as described above using dots for electrons
Line-bond formulas: a line is used to represent two electrons forming a bond (a shared pair)
Condensed formulas: bonds are not always shown and atoms of the same type bonded to another atom are grouped together
Lewis condensed
CH2=CH2H
H......
..H
HC::C
line-bond Lewis condensed
CC
CCC
CH
H
H H H
H
HHH H
H
H
H:C:::C:H
condensedLewisline-bond
H2C=O..
H
H....C::O
Polygon formulas: polygon formulas are often used to represent cyclic compounds for simplicity;
each carbon is assumed to have enough additional hydrogens to give each carbon four bonds
line-bond
decalincyclopentanecyclobutanecyclopropane
benzenecyclohexane
..
......
..
..
Chem 61Chapter 1-11 Acids and Bases
ACIDS AND BASES
Bronsted-Lowry: acid: a proton donor base: a proton acceptor
Strong acid: completely ionized or dissociated in water e.g., HCl, H2SO4, HNO3, HBr
Weak acid: only partially dissociated in water:
carboxylic acids are weak acid
conjugate acidconjugate basebaseacid
CH3CO2-
+ H3O+CH3CO2H + H2O
amines are weak bases
conjugate acid conjugate baseacidbase
CH3NH3+ + HO – CH3NH2 + H2O
Generally: strong acids have weak conjugate bases and weak acids have strong conjugate bases
that is, as acid strength increases, the basicity of the conjugate base decreases Thus the ability of the conjugate base to stabilize a negative charge determines the strength of an acid
Conjugate Acids
increasing acid strength
H2O HCN CH3CO2H H3PO4 HCl
15.75 6.37 4.75 2.12 -7pKa
Conjugate BasesHO – NC – CH3CO2
– H2PO4 – C l –
decreasing base strength
Chem 61Chapter 1-12 Acids and Bases
Factors affecting Acidity:
the electronegativity and the size of the atom which carries the negative charge influence its ability to stabilize the negative charge
electronegativity
size of the atom
increasing electronegativity of atom, increasing acid strength
(CH3)3C—H (CH3)2N—H CH3O—H F—H
increasing size of halogen, increasing acid strength
H—F H—Cl H—Br H—I
pKa 3.45 -7 -9 -9.5
pKa 50 35 15.5 3.45
ACIDITY CONSTANTS, Ka's
for acetic acid
CH3CO2H + H2O CH3CO2– + H3O+
Ka =[CH3CO2
–] [H+][CH3CO2H]
since stronger acids are more ionized, the larger Ka, the stronger the acid
pKa = -logKa, the lower the pKa, the stronger the acid
also, the higher the pKa, the weaker the acid or the stronger the base
the stronger the acid, the more stable the anion produced by ionization of the acid.
Chem 61Chapter 1-13 Lewis Acids and Bases
LEWIS ACIDS AND BASES
Lewis acid: electron pair acceptor: any species with an electron deficient atom
Lewis base: electron pair donor; any species with an unshared pair of electrons
BBr3, AlCl3, H3C+
..
.. ..H3N:, CH3CH2OH, H2C=O:
Chem 61Chapter 1-14 Quantum Mechanics
QUANTUM MECHANICS...Molecular Orbitals
In 1923 Louis De Broglie postulated that electrons have properties of three dimensional waves
Later a wave equation was developed. Solutions (Ψ) to this wave equation give the various electronic states known as atomic orbitals.
Ψ = probability of finding an electron in a certain space = electron probability densityplots of Ψ give the familiar s,p,d...orbitals
WAVE PROPERTIES
The amplitude of a wave may be above the resting state (positive) or below (negative)...no charge implied
A node is a point at which the amplitude is zero
Waves reinforce creating a wave of higher amplitude if they they are in phase.
+
–
+
–
+
–
Waves interfere if they are out of phase and create a wave which is of lower amplitude. Complete interference results in the cancelling of one wave by another.
+
–
+
–
+
–
2
2
Chem 61Chapter 1-15 Quantum Mechanics
1s, 2s, 2p orbitals
1s is spherical with the same phase throughout
2s is spherical with a node node is where ψ2 = 0
2p... three orbitals of equal energy (degenerate)
4s __3p __ __ __3s __2p __ __ __ order of filling of atomic orbitals2s __1s __
2pz2py2px
+
+-
node
node
Chem 61Chapter 1-16 Molecular Orbitals
MOLECULAR ORBITALS
Molecular orbitals = Linear combination of atomic orbitals
2 Atomic Orbitals must produce 2 Molecular Orbitals (the number of molecular orbitals equals the number of atomic orbitals which were combined to form them)
the hydrogen molecule
the energy of the hydrogen molecule with two electrons in the sigma orbital is 104 kcal/mole more stable than the separate hydrogen atoms; ∆E = 52 kcal/mole
if one electron is in the sigma and one in the sigma*, the molecule is of higher energy than the two separate atoms because the s* is slightly >∆E higher than the s orbitals while the s is ∆E lower
Bonding orbital...high electron density between nuclei
Antibonding orbital..node between nuclei (zero electron density)
σ bond is cylindrically symmetrical
Aufbau principle...fill lowest energy orbitals first
Hund's Rule...place one electron in each degenerate orbital first, then pair up
Pauli Exclusion Principle...two electrons in the same orbital must have opposite spins
H1s H1s
σ
σ*
bonding
antibonding
.
. .H2
∆E
>∆E
.Ψ1
Ψ2
Ψ1 − Ψ2
Ψ1 + Ψ2
4-sp3's
Chapter 1-17 Chem 61Molecular Orbitals of Carbon
MOLECULAR ORBITALS ON CARBON
Overlap between atomic orbitals in complex molecules often results in electron repulsions which destabilize the molecule. Hybrid orbitals allow for better overlap and a more accurate prediction of molecular structure.
Methane CH4 has a central carbon with four equivalent bonds to hydrogen
bond angles = 109.5°bond lengths = 1.09Å
sp3 Hybridization
carbon has electronic configuration 1s22s22p2
2p
2s
1s1s
2s
2p
sp3
1s
96 kcal hybridize
- +
2s3-3p's
C
H H
H H
+ 109.5° apart+
sp3 orbitals point toward the corners of a tetrahedron, 109.5° apart
any carbon bonded to four other atoms is sp3 hybridized, e.g. CH4, H3CCH3,
C—C bond length = 1.54Å
C-H σ bonds require 104 kcal/mol to be broken
-
methane
bond angles = 109.5°; tetrahedral
Chapter 1-18 Chem 61sp2 Molecular Orbitals of Carbon
sp2 Hybridization
sp2 hybridized carbons are trigonal planar with atoms 120° apart
sigma σpi π
C CHH
H H
H
HH
H
C
H
HC
H
H
C
H
HC
H
H
C
H
HC
H
H
C
H
HC
H
H
sigma σ*pi π*
ethylene C=C double bond: one sigma, one piE
hybridize96 kcal
1s
2p2p
2s
1s 1s
2s
2psp2
ethylene: trigonal planar
sigma* orbitalpi* orbital
pi orbital
sigma orbital
sp22p
120°
bond angles = 120°; C=C bond length = 1.34Å
pi (π) bonds are formed by the side by side overlap of two p-orbitals (approx. 68
kcal/mol)
pi bonds are above and below the plane where the sigma bond is located
pi bonds make the molecule rigid between the two atoms preventing rotation
ethylene: trigonal planar
2-2p's on each carboncombine to form pi-orbitals
2p
2s
1s1s
2s
2psp
1s
96 kcal hybridize
H H
H H
C C HH
C C HH
Chapter 1-19 Chem 61sp2 Molecular Orbitals of Carbon
sp Hybridization
sp hybridized carbons are linear with atoms 180° apart
1-2p 2-sp's
180° apart; the remaining two 2porbitals are 90° to the sp andeach other
+
-
+
2s
2p
C—C σ*C—C π*C—C π
E
C—C σ
Acetylene: linear; bond angles 180° C=C bond length = 1.20Åacetylene has two perpendicular pi bonds and one sigma bond
acetylene π-orbitals
acetylene σ-orbital2-sp's
CH3 OH
CH3 CO
OCH3
CH3 CO
OHCH3 C
O
HCH3 C
O
CH3
CH3 OCH3 CH3 NH2 CH3 Br
CH3CH3 CH2 CH2 HC CH
N
HHH
N
HCH3H
Chapter 1-20 Chem 61Functional Groups
FUNCTIONAL GROUPs
alkenesalkanes
alkyl halidesamines
O
HH
O
CH2CH3
HO
CH2CH3
CH2CH3
hybridize
one sp3 orbital already filledwith an unshared pair of electronsbonding can occur to three other atoms
N: 1s22s22p3
methyl amineammonia
....
1s
Oxygen: sp3
2s
2p sp3
1s
ethanol
esterscarboxylic acidsketonesaldehydes
ethersalcohols
Hybrid orbitals of oxygen and nitrogen
Nitrogen: sp3
alkynes
2s
2p sp3
1s
hybridize
sp3
acetone
..
sp2
..
diethyl ether
..O
CCH3
CH3....
water
1s
..
two sp3 orbitals already filled with an unshared pair of electronsbonding can occur to two other atoms
O: 1s22s22p4
....
– O C O –O
– O C O –O –
– O C OO –
2/3– O C O –2/3O –2/3
Chapter 1-21 Chem 61Resonance Structures
RESONANCE STRUCTURES
Chapter 6; Bruice, Pages 260 - 282:
Some molecules cannot be accurately represented by one simple line-bond formula:
they are "hybrids" of two or more structures
1. Resonance structures exist only on paper...the actual structures are hybrids of all the resonance structures
2. Resonance structures differ only in the position of electron pairs....not atoms
3. All structures should be proper Lewis structures (exceptions)
4. All resonance structures should have the same number of unpaired electrons
Nonequivalent Resonance Structures
1. Structures with a maximum number of octets is preferred.
2. Charges should be located on atoms with compatible electronegativity.
3. Minimize charge separation.
4. Charge separation may be enforced by the octet rule (atoms may be charged if they have an octet.)
CH2 CH2 CH3 CH3
C CCH3 CH3H3C–H2C CH2–CH3
CH3 CCH3
CH3
CH3 CH3 C C CH3
H
H
CH3
HCH3 C C C
H
H
H
HCH3
H
H
CHAPTER 2
Hydrocarbons: compounds containing only hydrogen and carbon: alkanes, alkynes, alkenes
alkanes contain only C—H and C—C single bonds CnH2n+2; alkenes CnH2n contain C— C double bonds and alkynes CnH2n-2 contain C—C triple bonds
Alkanes do not react with hydrogen, but alkenes and alkynes can react with hydrogen under certain conditions
2H2, catalyst
H2, catalyst
alkene
Chapter 2-1 Chem 61Hydrocarbons
alkane
alkyne
ISOMERISM
Structural Isomers: compounds with the same molecular formula that differ in the order in which the atoms are bonded to one another
Branched hydrocarbons are named from the parent with a substituent as a prefix hydrocarbon
branches are named by dropping ane from the parent and adding -yl
thus methane: methyl ethane: ethyl propane: propyl , etc.
Chapter 2-2 Chem 61Nomenclature
tert-butyl isobutyl sec-butylisopropyl
special trivial names for branches
– 23 –
CH3 C C CH3
H
H
CH3
H
CH3 C
H
H3C
C
H
H
C C
CH3
CH3
H
H
CH3
Chapter 2-3 Chem 61Nomenclature
methyl
butane is the parent
the branch is CH3; therefore methane
4
BASIC RULES OF NOMENCLATURE
1. Find the longest continuous chain (not necessarily drawn as a straight line) and name the parent
2. Number the parent chain starting at the end nearest the branch
3. Identify the branch and its position
4. Attach the number and the name of the branch to the parent name.
3
C H
OC
O
2 1
2-methylbutane
3,3,5-trimethylhexane
Other Functional Substitutents
increasingpriority -ol
-amine-ene-yne
prefixsubstituents
-one
-al
-oic acid
—OH—NR2—C=C——C≡C—R—,C6H5—, Cl—, Br—, —NO2
—CO2H
– 24 –
CH3 C C C
CH2CH3
CHO
H H
H CH3H
CH3 C C C
CH2CH2CH3
CH3
H O
H H
H C C C
H
COOH
H H
Br H H
CH3 C C C
CH3
H
H H
HO H H
CH3 C C C C CH3
H H
CH3H H CH3
4-methyl-3-heptanone2-ethyl-3-methylpentanal
2-pentanol
Chapter 2-4 Chem 61Nomenclature
2,5-dimethyl-2-hexene
4-bromobutanoic acid
alkenes
alcohols
carboxylic acids
aldehydes and ketones
– 25 –
Chapter 2-5 Chem 61Alkanes
ALKANES
Physical Properties
nonpolar compounds
C1 to C4 are gases; C5 to C17 are liquids; >C17 are solids
Boiling points increase about 30°C for each additional CH2 unit
branching lowers the boiling point due to disruption of van der Waals attractions
insoluble in water; soluble in organic solvents like diethyl ether, benzene
Chemical Properties
very unreactive compounds
Halogenation
CH3CH2Cl + HCl + other productslight
CH3CH3 + Cl2
Oxidation of Alkanes
Combustion
5CO2 + 6H2Ospark
CH3CH2CH2CH2CH3 + 8O2
oxidation: a reaction that either removes a hydrogen atom from a carbon or adds an electronegative element to the molecule (O, N, S, halogen).
CO2
CCl4
CH3CO2HCH3C≡NCH3CCl3
CH3CH3
HC≡CHCH3CH=OCH3CH=NHCH3CHCl2
CH2=CH2CH3CH2OH CH3CH2NH2CH3CH2Cl
high oxidation levellow oxidation level
– 26 –
Chapter 2-6 Chem 61Oxidation and Reduction
"Complete"/"incomplete" oxidation (combustion) of propane
3 O=C=O + 4 H2O "complete" combustion
6 CO + 8 H2O "incomplete" combustion
3 C + 4 H2O "incomplete" combustion2O2
7O2
5O2CH3CH2CH3
2 CH3CH2CH3
CH3CH2CH3
Heat of Combustion: energy released when a compound is completely oxidized to CO2 and water; depends mostly on number of CH2 units: approximately 157 kcal/ methylene unit
Reduction of Alkenes, Alkynes
reduction: a reaction that either adds H atoms or removes an electronegative atom from the molecule
heat
CH3CH3Pd, Ni, PtH2
no reaction (NR)
CH3CH3
CH2=CH2
Pd, Ni,or Pt; H2CH3CH3
CH2=CH2
HC≡CH
Pd, Ni,or Pt; H2
Pd, Ni,or Pt; H2
Pd, Ni,or Pt; H2
0 60 120 180 240 300 360
0 kcal
Eeclipsed
staggered
Ethane
0 60 120 180 240 300 360
E
gauche anti
eclipsed methyls
eclipsed
CC
H
H
HH
HH H
H
H H
H
H
HH
H
H
H
H
HCH3
H H
H
CH3
H CH3H
H
H
CH3
HH
H CH3
H
CH3
H HH
H3C
H
CH3
H HCH3
H
H
CH3
HH
CH3 H
H
CH3
CONFORMATIONS OF OPEN CHAIN COMPOUNDS
Molecular Mechanics
Steric Energy: (isolated molecule in gas phase at 0° K): relative energy of a conformation or stereoisomer calculated using classical mechanics (atoms and bonds treated as balls and springs)
Stretch (bond length): energy associated with stretching or compressing bonds from their optimal length
Bend (bond angle): energy associated with deforming bond angles from their optimal angle
Stretch-Bend: energy required to stretch two bonds involved in a severely compressed bond angle
dipole-dipole: energy associated with interaction of bond dipoles
out of plane: energy required to distort a trigonal center out of planarity
torsional strain: destabilization from eclipsing of bonds on adjacent atoms
van der waals strain: destabilization from two atoms being too close together
Ethane
Chapter 2-7 Chem 61Conformations of Acyclic Hydrocarbons
Newman projection
staggered eclipsed
dimensional
∆H = 3 kcal/mole
Butane
3.8 kcal
4.5 kcal
0.9 kcal
anti eclipsed1 gauche eclipsed2 gauche eclipsed3
staggered
Chapter 2-8 Chem 61Conformations of Cyclic Hydrocarbons
H
H
H
H
H
H
H
H
H
HH
H
H
H
H
H
H
H
-∆H (kcal/mole)
499.8655.9 793.5 944.5
-∆H per CH2
166.6 164.0158.7 157.4
strain energy per CH2
9.2 6.6 1.3 0
total strain energy
27.626.46.50
cyclopropanecyclobutane cyclopentanecyclohexane
cyclopropane: bond angles 60°; tetrahedral 109.5°
cyclobutane and cyclopentane
sp3 orbitals are 109.5° apartcyclopropane bond angles 60°maximum overlap cannot be achieved
envelope cyclopentanepuckered cyclobutane
puckering allows bond angles to be at or close to the tetrahedral angle and minimizes torsional strain (electron—electron repulsions in eclipsed bonds) between adjacent C—H bonds
CYCLIC COMPOUNDS
Strain energy
H
H
H
HHH
H
H
H
HH
H
H
H
H
HHH H
H
H
HH
H H
HH
HH
HH
H
H
HH
H
H
H
H
HH
H
H
H
HH
H
H
axial bonds
half chairchair
chair
boat
Chapter 2-9 Chem 61Conformations of Cyclohexane
twist boat
cyclohexane
equatorial bonds
chair cyclohexane
E
chair
half chairboat
twist boat
10.8 kcal5.57.1
0 60 120 180 240 300 360
H
H
H
H
CH
H
HH
H
HCH3
HH
H
HH
H C
CCH3
H
H
H
HH
H C
CH
HCH3
H
HH
H
H
CH3
H
CH
H
CH3CH3
H
HC(CH3)3
HH
H
Substituted Cyclohexanes
substitutents on cyclohexanes preferntially occupy equatorial positions due to 1,3 diaxial interactions in axially substituted cyclohexanes
Chapter 2-10 Chem 61Conformations of Cyclohexane
more stable by 1.8 kcal/mole
anti
gauche
axial substitution similar to gauche butane equatorial substitution similar to anti butane
1. if the atoms are different, highest atomic number gets highest priority
2. if two isotopes of the same element, the one with the higher mass gets higher priority
3. if the atoms are the same, the atomic numbers of the next atoms are used to assign priority
4. atoms attached by double or triple bonds are given single bond equivalencies
C CCl
H
CH3
CH3CH2C C
F
I
Cl
Br
R C
O
R' R C
(O)
R'
O (C)
R C
O
OH R C
(O)
OH
O (C)
R C CR' R C (C)
(C)
C (C)R'
(C)
R C C—R' R C H
(C)
C R'H
(C)
H H
Chapter 3-2 Chem 61Absolute Configuration
Stereoisomers: compounds with the same structures differing only in their arrangement of atoms in space.
not cis or trans
=
=
=
000
000
000
000
I
000
000
000
000 Br
0000
0000
0000
0000
Br
000
000
000
000
I
H
0000
0000
0000
Cl
H
000
000
000
000 Cl
0000
0000
0000
0000
I
0000
0000
0000
0000
Br 0000
0000
0000
Br
0000
0000
0000
0000
I
H
000
000
000
000
Cl
H
0000
0000
0000
Cl
Chapter 3-3 Chem 61Stereochemistry: Chirality
H
C*
CH2CH3
CH3Cl
H
C*
CH2CH3
ClCH3
OH
C*
CH2CH2CH3
CH2CH3CH3
Br
C*
CH3
H
HCCCH3
OH
CH3
C
CH2CH3
OHH
CH3
CH2CH3
OHHHH OH
H
CH3
OHHH OH
CHIRALITY
An object or molecule which cannot be superimposed on its mirror image is said to be chiral
If an object or molecule can be superimposed on its mirror image, it is achiral.
Enantiomers: isomers which are nonsuperimposable mirror images.
Stereogenic carbon atom: a carbon with four different groups bonded to it (designated *).
Fischer Projections
by convention: horizontal bonds come out of the paper vertical bonds go back into the paper
enantiomers
mirror plane
Chapter 3-4 Chem 61Stereochemistry: Chirality
OPTICAL ROTATION
enantiomers have almost all the same physical and chemical properties
properties which differ are:
1. interaction with other chiral substances
2. interactions with polarized light
Polarimeter
lamp
ordinarylight
polarizer
polarized light
solution ofsample
rotated light
if plane polarized light is passed through a solution of a single enantiomer, the light is rotated either to the right or the left; the opposite enantiomer will rotate the light in the opposite direction
optically active: a compound which rotates plane polarized light optical isomers: enantiomers
dextrorotatory: rotates plane polarized light to the right, also (+) or dlevorotatory: rotates plane polarized light to the left, also (–) or l
racemic mixture: a 1:1 (50:50) mixture of two enantiomers
does not rotate plane polarized light; therefore optically inactive
Preparation of Enantiomerically Enriched Compounds
Generating chiral compounds from achiral compounds
Enzymes
yeast
Asymmetric Reagents
>95% one enantiomer
>98% R
t-BuOOH
(+)-diethyl tartrateTi(i-OPr)4
Resolution of a Racemic Mixture
racemic
(R) R*COOH + (S) R*NH2
(S) R*COOH (S) R*COO–(S) R*NH3
+
(R) R*COO–(S) R*NH3+
+ +
diastereomeric salts (separable)
separated salt converted back to acid
(R) R*COOH
(S) R*COOH
Chem 61Chapter 4-1 Acids and Bases
ACIDS AND BASES
Bronsted-Lowry: acid: a proton donor base: a proton acceptor
Strong acid: completely ionized or dissociated in water e.g., HCl, H2SO4, HNO3, HBr
Weak acid: only partially dissociated in water:
carboxylic acids are weak acid
conjugate acidconjugate basebaseacid
CH3CO2-
+ H3O+CH3CO2H + H2O
amines are weak bases
conjugate acid conjugate baseacidbase
CH3NH3+ + HO – CH3NH2 + H2O
Generally: strong acids have weak conjugate bases and weak acids have strong conjugate bases
that is, as acid strength increases, the basicity of the conjugate base decreases Thus the ability of the conjugate base to stabilize a negative charge determines the strength of an acid
Conjugate Acids
increasing acid strength
H2O HCN CH3CO2H H3PO4 HCl
15.75 6.37 4.75 2.12 -7pKa
Conjugate BasesHO – NC – CH3CO2
– H2PO4 – C l –
decreasing base strength
Chem 61Chapter 4-2 Acids and Bases
Factors affecting Acidity:
the electronegativity and the size of the atom which carries the negative charge influence its ability to stabilize the negative charge
electronegativity
size of the atom
increasing electronegativity of atom, increasing acid strength
(CH3)3C—H (CH3)2N—H CH3O—H F—H
increasing size of halogen, increasing acid strength
H—F H—Cl H—Br H—I
pKa 3.45 -7 -9 -9.5
pKa 50 35 15.5 3.45
ACIDITY CONSTANTS, Ka's
for acetic acid
CH3CO2H + H2O CH3CO2– + H3O+
Ka =[CH3CO2
–] [H+][CH3CO2H]
since stronger acids are more ionized, the larger Ka, the stronger the acid
pKa = -logKa, the lower the pKa, the stronger the acid
also, the higher the pKa, the weaker the acid or the stronger the base
the stronger the acid, the more stable the anion produced by ionization of the acid.
Chem 61Chapter 4-3 Lewis Acids and Bases
LEWIS ACIDS AND BASES
Lewis acid: electron pair acceptor: any species with an electron deficient atom
Lewis base: electron pair donor; any species with an unshared pair of electrons
BBr3, AlCl3, H3C+
..
.. ..H3N:, CH3CH2OH, H2C=O:
Chapter 5-1 Chem 61Alkenes: Structure and Isomerism
Alkene Structure
sp2 hybridized carbons are trigonal planar with atoms 120° apart
sigma σpi π
C CHH
H H
H
HH
H
C
H
HC
H
H
C
H
HC
H
H
C
H
HC
H
H
C
H
HC
H
H
ALKENES
sigma σ*pi π*
ethylene C=C double bond: one sigma, one piE
hybridize96 kcal
1s
2p2p
2s
1s 1s
2s
2psp2
ethylene: trigonal planar
sigma* orbitalpi* orbital
pi orbital
sigma orbital
sp22p
120°
bond angles = 120°; C=C bond length = 1.34Å
pi (π) bonds are formed by the side by side overlap of two p-orbitals (approx. 68 kcal/mol)
pi bonds are above and below the plane where the sigma bond is located
pi bonds make the molecule rigid between the two atoms preventing rotation
Cahn-Ingold-Prelog Sequence rules
1. if the atoms are different, highest atomic number gets highest priority
2. if two isotopes of the same element, the one with the higher mass gets higher priority
3. if the atoms are the same, the atomic numbers of the next atoms are used to assign priority
4. atoms attached by double or triple bonds are given single bond equivalencies
not cis or trans
Chapter 5-2 Chem 61Alkenes: Structure and Isomerism
Geometric Isomerism in alkenes
68 kcal/mole to cleave a carbon-carbon pi bond thus no "free" rotation
cis-1,2-dichloroethene
cis-2-butene
trans-2-pentene
Stereoisomers: compounds with the same structures differing only in their arrangement of atoms in space.
trans-2-butene
Z zusammen (together)E entgegen (across)
C CCH3
H
H
CH3
C CH
CH3
H
CH3
C CCH3
H
H
CH3CH2
C CH
Cl
H
Cl
C CCl
H
CH3
CH3CH2C C
F
I
Cl
Br
C CHH
H H
H
HH
H
C
H
HC
H
H
C
H
HC
H
H
C
H
HC
H
H
C
H
HC
H
H
C
H
HC
H
H
Alkenes: Reactivity
The reactivity of alkenes is due to their ability to donate a pair of electrons: their Lewis basicity.
pi* orbitalpi orbital
sigma orbital
sp22p
120°
Consider Ethylene:
The site of reactivity is the pi-bond due to the exposed nature of the pi electrons
sigma* orbital
H2C CH2
Br H
The pi electrons act as a Lewis base (electron pair donor).These electrons react with electron deficient species (Lewis acids)
Electrophile: an electron deficient ion or molecule
Nucleophile: an electron rich ion or molecule.
Reaction Mechanisms of Electrophilic Addition Reactions
reaction mechanism: a detailed description of how a chemical reaction occurs.
A roadmap of a reaction....curved arrows show which bonds are formed or broken. A mechanism includes the transition states involved in making and breaking bonds and reactive intermediates that are formed along the pathway from reactants to products.
H+ Br+
Chapter 5-3 Chem 61
HH
H
H
Alkenes: Electrophilic Addition Reactions
BH3 +CH3
I– CH3NH2 H2O
H
H–BrCH2—CH2–H
HH
CH2=CH2
Br–
HH
H
Br
H
+
Br
2p
Br–
Chapter 6-1 Chem 61Thermodynamics
Thermodynamics
describes the properties of a system at equilibrium
∆G = – RT ln Keq where Keq = [reactants]
reactants products
transition stateEnergy Diagram
E
progress of reaction
reactants
reactants
products
products
– ∆G
+ ∆G
∆G ‡
exergonic
endergonic
[products]
R = 1.986 X 10-3 kcal K-1 mol-1 (gas costant)T = temperature in degrees Kelvin
∆Go = ∆Ho – T∆So
free energy = enthalpy – T x entropy
enthalpy = heat of reactionentropy = state of disorder
Chapter 6-2 Chem 61Kinetics
Kinetics
describes the rate of progression of a reaction
depends on the energy of activation (the stability of the transition state):
the lower the transition state energy, the faster the reaction will be.
reactants products
transition state
E
progress of reaction
∆G ‡
first order reaction
rate = k[A] rate is proportional to the concentration of one reactant
second order reaction
rate = k[A] [B] rate is proportional to the concentration of two reactants
reactants products
transition state
E
progress of reaction
∆G ‡slower
faster
reactants products
transition statetransition state
intermediateE
A two step reaction
Rate limiting step:
is the slowest step (step with the highest energy of activation)
∆G‡ ∆G‡
C C
C C C C
E
C C
EA
CH3 C CH2
CH3
CH3 C CH3
CH3
CH3 C CH3
CH3
X
Electrophilic Addition: Addition of H–X
Electrophilic Addition Reactions
Nucleophilic addition does not occur with alkenes unless an electron-attracting group is attached to one of the carbon atoms to cause a polarity difference.
+ Nu:
A–
However, in the electrophilic addition reaction, the reagent is E+A– (E+ = electrophile, A– = some anion)
Chapter 6-3 Chem 61
+E+ A–+
Note the alkene acts as a Lewis base (or nucleophile) toward the Lewis acid (or electrophile)
The intermediate, a carbocation, reacts with A– to yield a product in which E and A have added to the C=C double bond.
Addition of HX (E+ = H– A– = F–, Cl–, Br–, I–)
No Reaction
++ H—X
Reactivity: H—I > H—Br > H—Cl > H—F
X–
The reaction is said to be regioselective since an unsymmetrical alkene gives a predominance of one of two possible electrophilic addition products. The term regiospecific is used if one product is formed exclusively.
In these reactions, the halogen (A–) is found attached to the most substituted carbon atom of the alkene (Markovnikoff's Rule):
CH3 C CH2
CH3
CH3 C CH3
CH3
CH3 C CH3
CH3
X
R C CHR
RR C CHR
R
R C CHR
R
X
R CH C—R
RR C CHR
R
HR C CHR
R
X
CH CH2 CH CH3 CH CH3
Cl OCOCH3
Chapter 6-4
++ H—X
Chem 61Electrophilic Addition: Addition of H–X
(CH3)2CH CH CH2 (CH3)2CH CH CH3
(CH3)2CH CH CH3 (CH3)2C CH2 CH3
Cl Cl
X –
3° carbocationmore favored
X –
+ H—X+
X –++ H—X
Thus regioselectivity is explained by the lower Eact leading to the 3° carbocation intermediate.
If a nucleophilic solvent is employed in the electrophilic addition reaction solvent may compete with A – for the intermediate carbocation.
2° carbocationless favored
HCl
Note the C=C's of the aromatic ring do not undergo this type of reaction.
Since a carbocation intermediate is involved, rearrangement may sometimes occur.
+CH3COOH(solvent)
HCl
40%+
+
60%
Chapter 6-5 Chem 61Carbocation Stability
CH2+
CHCH3
C(CH3)2
CH
C
Name
methyl
primary 1°
secondary 2°
tertiary 3°
vinyl
allyl
secondary allyl
tertiary allyl
phenyl
benzyl
secondary benzyl
tertiary benzyl
diphenylmethyl
triphenylmethyl
Structure
CH3+
CH3CH2+
(CH3)2CH+
(CH3)3C+
CH2=CH+
CH2=CH—CH2+
CH2=CH—CH+(CH3)
CH2=CH—C+(CH3)2
+
+
+
+
+
Hydride Affinity
(kcal/mol)
314
274
247
230
287
256
237
225
298
233
226
220
215
210
Carbocation stabilityCarbocations are highly reactive intermediates ; they cannot be observed directly in the reaction mixture since they react as soon as they are formed.
Any structural feature that will disperse a positive charge will stabilize the carbocation.
This stabilization has been quantitated by so-called hydride H:– affinity measurements (gas phase).
The lower the value of the hydride affinity, the more stable the carbocation.
Chapter 6-6 Chem 61Carbocation Stability
CCH3
CH3 C
H
H
CH
HC
CH
H
H
CH2 CH2CH CH2 CHCH2
Thus the order of carbocation stability is triphenyl methyl > diphenylmethyl > 3° ≈ benzyl ≈ allyl > 2° > 1° >> methyl
Carbocation centers can be stabilized by overlap with adjacent pi orbitals (resonance) or adjacent sigma orbitals (hyperconjugation).
σ
p
H sigma donation
adjacent sigma bond donates some electron density to the empty p orbital on the carbocation center
more adjacent sigma orbitals result in a more stable carbocation thus 3° > 2° > 1° > methyl
..
equivalent resonance structures
+ +
empty p orbital ovelaps with adjacent pi orbital to disperse the positive charge
pip
Since the pi orbital is closer in energy to the empty p than the sigma orbital, the pi overlap stabilizes the cation more efficiently.
+
+
Chapter 6-7 Chem 61Electrophilic Addition: Addition of H2O
Addition of Water (E+ = H+; A– = HOH)
R2C CHR R2C CH2 R
R2CR2C CH2 R
CH2 R
:OH
H
R2C CH2 R
O:+HH
R2C CH2 R
:O H
..
use H2SO4, H2O
Step 1
Step 2
Step 3:OH2
R2C CHR
R2C CH2 R
R2C CH2 R
OH
H
Eact
+
H+
R2C CH2 R
O H
+
+..
+
TS1
TS2
TS3
Addition of water to alkenes is a reversible reaction and whether the alkene orthe alcohol predominates at equilibriuim depends on the reaction conditions.
Low temperatures and high concentrations of water favor the alcohol.
Higher temperatures and removal of water favor the alkene.
:OH2
..
+ H3O+
+
bridged carbocation
CH3 C
O
O O C
O
CH3Hg –O C
O
CH3O C
O
CH3+Hg
C CH2
CH3
CH3
O C
O
CH3+Hg C CH2CH3
CH3
O C
O
CH3Hg
C CH2CH3
CH3
O C
O
CH3+Hg
C CH2
CH3CH3 O C
O
CH3Hg
+OH2
C CH2
CH3CH3C CH2HgOCOCH3
CH3
HgOCOCH3
HO
CH3
+OH2
C CH3 + Hg°
CH3CH3
HO
+
mercury acetate E+
carbocation
++
Chapter 6-8
C CH2
CH3
CH3
C CH3
CH3CH3
RO
Chem 61Electrophilic Addition: Oxymercuration
Since no rearrangement is observed in reactions with +HgOCOCH3 thebridged carbocation is believed to be the true intermediate. Attack by H2O on the more electron deficient carbon opens the bridged cation (backsideattack).
NaBH4 reduction of the C—Hg bond yields the alcohol in a separate step.
or
Addition of Mercury acetate and Water ( E+ = +HgOCOCH3; A– = OH2)
To avoid carbocation rearrangements under the conditions used in addition of H2O (H2SO4/H2O) a better system for the addition of water to a C=C has been devised.
H2O
NaBH4
If alcohol is used as the solvent in this process ethers are obtained as the products.
1. Hg(OCOCH3)2, ROH
2. NaBH4
H2O:
C CH H
R H
H B HH
C CH H
R H
H B HH
C C
H HR H
H B HH
4 BH3 (borane)
2 B2H6 (diborane)+ 3 NaBF4
Addition of BH3 to C=C, C≡C is termed hydroboration.
R—CH=CH2 + BH3
Note B is the electrophile and H acts as A-. The addition of H– and B occur
from the same face of the alkene (syn addition). Further reaction of
R—CH2–CH2—BH2 with more alkene yields first the dialkyl borane and then
Treatment of a trialkylborane with CH3CO2D yields a monodeuterated alkane
CH3CH2DCH3CO2D
(CH3CH2)3B
CH3
H
B
CH3
HH
OH
CH3
HH
OH
CH3
HH
Bromination of a trialkylborane yields the alkyl bromide.
C6H5CH2CH2BrBr2
HO–
(C6H5CH2CH2)3B
Stereochemical Results of Hydroboration
Hydroboration is regioselective and stereospecific
cis-addition
BH3 H2O2
HO– +
enantiomers
Thus H and OH add cis to the C=C.
C C C C
Br
C C
Br
Br
C CH H
CH3CH3
CC C
H
HCH3
CH3
X
XC
H
H
CH3
CH3
X
X
C CH CH3
HCH3C C
H
CH3H
CH3
X
X
X
X
HH
X
X
HH
Stereochemistry of Halogenation
Alkenes containing alkyl substituents react with Br2 via a bridged bromonium ion intermediate. Nucleophilic opening of the bridged ion by backside attackof Br – at carbon gives overall anti (trans) addition of E+(Br+) and A– (Br–) tothe double bond. Chlorination reactions proceed by a similar pathway.
Some examples:
Br—
+
Chapter 6-12 Chem 61Electrophilic Addition: Stereochemistry of Halogen Addition
ii) Heat of Hydrogenation Studies The heat of hydrogenation of an alkene is the energy difference between the starting alkene and the product alkane. It is calculated by measuring theamount of heat released in a hydrogenation reaction.
CH3CH2CH2CH3 + heat
E
progressprogressprogress
∆Hh∆Hh
∆Hh
E-CH3CH=CHCH3Z-CH3CH=CHCH3CH3CH2CH=CH2
Alkene Heat of Hydrogenation, ∆Hh (kcal/mol)
CH3CH2CH=CH2 -30.3CH3CH=CHCH3, Z -28.6CH3CH=CHCH3, E -27.6
Thus the stability of the three alkenes is
CH3CH=CHCH3, E > CH3CH=CHCH3, Z > CH3CH2CH=CH2
These comparisons indicate
i) increasing alkyl substitution stabilizes an alkene ii) conjugated dienes are more stable than non-conjugated dienes,iii) trans alkenes are more stable than cis alkenes (steric repulsions in cis)
CH3 C CH2
CH3
CH3 C CH3
CH3
CH3 C CH3
CH3
X
CH3 C CH2
CH3
CH3 C CH2
CH3
CH3 C CH2
CH3
H
R C CHR
RR C CHR
R
R C CHR
R
H
termination
.Br2
3° carbocationmore favored
.
.
ROOR+ H—Br
+
RO–ORperoxide
heat or light
2 RO .
Br Br
propagation
+ Br
RO . RO–H + Br .
Br
Br
Chem 61Radical Addition Reactions
Br
.
Addition of HBr in the presence of a radical initiator such as peroxides effectsso called anti Markovnikov addition of HBr
++ H—XX –
Reversal of regioselectivity (position of bromine and H addition) results from the inital addition of Br radical rather than H+.
initiation
CH3 C CH2
CH3
Br
propagation
Chapter 6-15
+ Br
+ H—Br
. . H–Br
+ Br
+ Br
CH3 C CH2
CH3
Br
.
Br.
RO–OR2 RO .
combination of any two radicals
Free Radical: any atom or group of atoms that contains one or more unpaired
electrons.
A free radical is symbolized as a single dot representing the unpaired electron: Cl.,
Br ., H3C., etc.
Free radicals are usually encountered as high energy short-lived, non-isolable
intermediates in certain reactions.
Stability of Carbon Free Radicals (Which H atom is abstracted?)
Stability of carbon free radicals follows the same pattern as carbocations:
CH2=CH—CH2. , C6H5CH2
. > (CH3)3C
. > (CH3)2CH
. > CH3CH2
. >
CH3.
allyl benzyl tertiary secondary primary methyl
b)
+ Br –
Note that the carbon in a) has lost an electron pair to the bromine atom, thus thecarbon has an sp2 configuration and a single "+" charge resulting from the empty p orbital.
In b) the carbon atom has lost one electron; the carbon is also in the sp2
configuration with the unpaired electron in the p orbital.
CH3 C Br
CH3
CH3
CH3 C Br
CH3
CH3
CH3 C
CH3
CH3
CH3
C.CH3
CH3
Free Radical Substitution Reactions
Free Radical: any atom or group of atoms that contains one or more unpaired
electrons
A free radical is symbolized as a single dot representing the unpaired electron:
Cl., Br., H3C., etc.
Free radicals are usually encountered as high energy short-lived, non-isolable
intermediates in certain reactions. (Recall that carbocations were seen to be
intermediates in certain reactions in Chapter 5).
a)
CH3C
CH3
CH3
CH3
C CH3CH3
single barbed arrows indicate the movement of one electron
free radical intermediate
carbocation intermediate
Br.
Chapter 7-1 Chem 61Radical Reactions of Alkanes
equal probability of electron being in either lobe
(CH3)3C.(CH3)3C+
.
double barbed arrows indicate the movement of two electrons
Chapter 7-2 Chem 61Radical Reactions of Alkanes
Cl Cl
Free Radical Substitution Reactions
Chlorination of methane in the presence of light is the classic example
a) Initiation of the radical chain reaction
CH3Cl + CH2Cl2 + CHCl3 + CCl4 + HCllightCH4 + Cl2
Reaction mechanism involves three general steps: Initiation, propagation, and termination
H C H
H
light
heat or2Cl
. requires 58 kcal/mole
b) Propagation (self-perpetuating the chain reaction)
two chlorine radicals
i)
a methyl radical
H—Cl + CH3. requires 1 kcal/mole
Cl.
chlorine radical can now react with more CH4and propogate the chain
CH3—Cl + Cl.CH3
. + Cl—Clii)
Note: Cl has substituted for a H and therefore free radical substitution
iii) As the concentration of CH3—Cl increases in the reaction mixture Cl. starts to
react with both CH4 and CH3Cl.
Cl—CH2—Cl + Cl. .CH2—Cl + Cl—Cl
H—Cl + .CH2—Cl (chloromethyl radical)Cl. + CH3—Cl
Hence CH2Cl2, CHCl3, and CCl4 are formed
c) Termination of the Chain Reaction
Any reaction of Cl. or of the carbon free radical intermediates (CH3.,
.CH2Cl, .CHCl2, .CCl3) that disrupts the propagation of the chain will
terminate the reaction.
Cl—CH2—CH2—Cl.CH2Cl +
.CH2Cl
CH3—CH3CH3. + CH3
.Cl
. + .CH2Cl CH2Cl2
CH3—ClCl. + CH3
.
Chapter 7-3 Chem 61Reactivity of the Halogens
Reactivity of the Halogens
Bond Dissociation Energy
F2
37
Cl2
58
Br2
46
I2
36 kcal/mole
Thus the energy of activation for formation of F. and I. is lower than Cl. and Br.
however, the order of reactivity of X. with alkanes is: F2 >> Cl2 > Br2 >> I2 (I2does not normally react; F2 reacts explosively) Thus the rate determining step is
not:
2X.X—X
H—X + .CH3X. + CH4
H—Cl + .CH3Cl. + CH4
Br . + CH4 H—Br +
.CH3
Rather, hydrogen atom abstraction is the rate determining step.
Since chlorination is faster than bromination, Eact for
must be lower than the Eact for
[CH3. + HCl +Cl2]
CH3Cl + Cl.
Cl. + CH4
Eact
Progress
E
Eact
CH3Br + Br .
[CH3. + HBr + Br2]
Br. + CH4
CH3 C
CH3
CH3
CH CH3 CH3 C
CH3
CH3
CH CH3 CH3 C
CH3
CH3
CH CH3
OH
CH3 C
CH3
CH3
CH CH3 CH3 C
CH3
CH3
CH CH3
Cl
H
CCH2Cl
CH3
CH3CH2
Br
CCH2Cl
CH3
CH3CH2
Cl
CCH2Cl
CH3
CH3CH2
Cl
CCH2Cl
CH3
CH3CH2
OCH3
CCH2Cl
CH3
CH3CH2OCH3
CCH2Cl
CH3
CH3CH2
Stability of Carbon Free Radicals (Which H atom is abstracted?)
Stability of carbon free radicals follows the same pattern as carbocations:
CH2=CH—CH2. , C6H5CH2
. > (CH3)3C
. > (CH3)2CH. > CH3CH2
. > CH3.
allyl benzyl tertiary secondary primary methyl
Unlike carbocations, free radicals do not rearrange to a more stable free radical.
Chapter 7-4 Chem 61Reactivity of the Halogens
2°
3°2°
Cl2.
H2O
++
Since both carbocations and free radicals involve planar sp2 carbon atoms, racemization will be observed in the products resulting from both intermediates.
(50:50)
(50:50)
RSS
R RS
+
+
CH3OH
Cl2
c) allylb) 3° d) allyl e) 2°
CH3 CH2 CH3 CH3 CH3 CH3
CH3 CH3
Br
Br
Selectivity of Hydrogen Atom Abstraction
The more stable free radical should determine the nature of the product
Br.
CH3 CH CH3
Cl
CH3 CH CH3
Br
.. .
..
a) 1°
Thus intermediates c) and d) should be more stable and should lead to
andas products.
Chlorination is much less specific than bromination
Chapter 7-5 Chem 61Selectivity of Halogenation
100%
45%55%
CH3CH2CH3
CH2CH3CHCH3
CHCH3
CH2CH2Cl
Cl
Br
Br2
Cl2 + CH3CH2CH2ClCH3CH2CH3
The difference in selectivity of H atom abstraction by Cl. and Br
. is explained by
the Hammond postulate. The transition state in the chlorination reaction is less
influenced by the stability of the intermediate free radical; thus both (CH3)2CH.
and CH3CH2CH2. result.
In bromination the more stable free radical intermediate is highly favored; thus
(CH3)2CH. is formed exclusively.
Other examples of this are:
Br2, light
Cl2, light
100%
(56:44)
+
NBr
O
O
NH
O
O Br
C6H5 C O O C C6H5
O O
C6H5 C O.
H O O
O
H H O.
CH3
CCH3
C≡N.
N N C CH3
CH3
C≡N.
CH3
C.
CH3
C≡N.
Bromination with N-Bromosuccinimide (NBS)
CCl4
light or peroxide
NBS acts as a Br2 source; the reaction is initiated by either light or a peroxide (ROOR). NBS is used to introduce a Br atom at allylic or benzylic positions.
+ +
Chapter 7-6 Chem 61Halogenations
a) dibenzoyl peroxide
b) hydrogen peroxide
c) alkyl hypochlorites
d) azobisisobutyrylnitrile
2
2
R—O—Cl RO. + Cl
.∆
+ N≡N2
Other Sources of Free Radicals
Although light (hν) and heat (∆) are used for halogenation reactions other reagents are often useful for initiating free radical reactions. Some of these reagents include:
Clues to Whether a Reaction Involves Free Radicals
a) Reaction requires high temperatures (>200°)b) Reaction requires light energy (hν)c) Reaction requires an initiator (a-d above) or oxygen.
(L) Leaving Group: any group that can be displaced from a carbon atom (in thiscase I—)
(Nu) Nucleophile: the species that attacks the carbon atom bearing L anddonates the electron pair to form the nucleophile—C bond (in this case —SH)
(R—I) Substrate: the molecule, containing the leaving group that is acted on bythe nucleophile (here: 2-iodopropane)
Solvent: the medium used to dissolve the substrate and the nucleophile (in this case methanol, CH3OH); solvent can sometimes be the nucleophile (solvolysis)
Curved arrows are used to indicate the movement of electrons during anucleophilic substitution reaction. By convention electron movement is writtenfrom negative to positive.
Reaction Mechanisms of Nucleophilic Substitution Reactions
reaction mechanism: a detailed description of how a chemical reaction occurs. A roadmap of a reaction....curved arrows show which bonds are formed or broken. Amechanism includes the transition states involved in making and breaking bondsand reactive intermediates that are formed along the pathway from reactants toproducts.
CASE 1:SN2 Substitution Nucleophilic 2nd order (bimolecular):
Nucleophile approaches substrate from the backside of L
Point of highest energy along the reaction coordinate is the transition state: theO—C bond is partially formed and the C—Br bond is partially broken
The Nu is bonded to the carbon on the opposite side of that occupied by theleaving group L: Net inversion of the carbon atom is observed in all SN2reactions
Reaction Rate: the time required for all substrate molecules to be converted toproduct
The rate of an SN2 reaction is proportional to the concentrations of the substrate and the nucleophile, thus the reaction is second order
Rate = k[substrate][nucleophile]
k is the proportionality constant called the rate constant
Rate and Eact
Under the same reaction conditions, the reaction with the lower Eact has a fasterrate
Reaction 2 below is faster
Rxn 2Rxn 1
EactEact
E
Increasing alkyl group substitution at the carbon atom bonded to the leaving grouphinders approach of the nucleophile. The Eact increases due to steric hindrance of nucleophile approach and thus the SN2 rate decreases
Increasing alkyl group substitution at the carbon atom bonded to the leaving grouphinders approach of the nucleophile. The Eact increases due to steric hindrance of nucleophile approach and thus the SN2 rate decreases
Relationship between Substrate Structure and SN2 Rate
Alkyl halide Relative rate of SN2
CH3—X 30
CH3CH2—X 1
CH3CH2CH2—X 0.4
(CH3)2CH—X 0.025
(CH3)3C—X ~0
Relative SN2 rate
93
1
0.0076
CH3—I + Cl–
CH3CH2—I + Cl–
(CH3)2CH—I + Cl–
CH3—Cl + I–
CH3CH2—Cl + I–
(CH3)2CH—Cl + I–
SUMMARY
SN2 reactions occur by the attack of a nucleophile on substrates containing the leaving group attached to a methyl, primary carbon, or secondary carbon.
SN2 reactions do not occur with tertiary alkyl halides
SN2 exhibit a single transition state (concerted reaction, i.e. not stepwise, no intermediates)
Inversion of configuration at the carbon results from backside attack of the nucleophile
The rate of SN2 reaction depends on the concentration of the nucleophile and the substrate
Step 1 involves ionization of the alkyl halide to the halide ion and the tertiary carbocation.
The step with the highest Eact is the slowest step (rate determining step) in the pathway.
Ionization is aided by polar solvents (H2O, ROH) which solvate and thus stabilize the carbocation and the leaving group anion.
The transition state is pictured as (CH3)3Cδ+------δ+OCH3
(CH3)3C O+ CH3
H
(CH3)3C O CH3
Step 1: ionization (loss of halide ion)
CASE 2: SN1: Substitution Nucleophilic First Order (Unimolecular)
Substrates containing the leaving group attached to a tertiary carbon atom reactwith weakly basic nucleophiles by an alternative nucleophilic substitution reaction mechanism
The process involves three steps:
(CH3)3C—OCH3 + HBr
3
H
Br–
+ HBrO+ H O
H
CH3
CH3
(CH3)3C
The transition state is pictured as (CH3)3Cδ+ ------Br δ–.
fast
..
..CH3O—H
2
(CH3)3C + Br –
The transition state is pictured as
Step 3 involves acid-base reaction between either Br– or more likely solvent CH3OH in a very rapid reaction
CCH3
CH3CH3
C
CH3CH2
CH3 CH2CH2CH3
Br
C
CH3CH2
CH3 CH2CH2CH3
OH
C
CH3CH2
CH3CH2CH2CH3
OH
Stereochemistry of SN1 reaction
the intermediate carbocation contains an sp2 hybridized carbon atom which is planar
+
Thus attack of CH3OH on the carbocation can occur equally from the top and bottom. If the carbon atom containing the leaving group were asymmetric,racemization of the product would be observed
If RO– is bulky (CH3)3CO– vs. CH3O–; a higher percentage of the less substituted alkene results
+
+
(CH3)3CO –
CH3O –
50%50%
20%80%
H
c d
b a
L
C Cc
d
b
a
Ph C C
Br
H
Ph
H
CH3Ph C C
Br
HPh
H
CH3
C C
Ph
H
Ph
CH3
Stereochemistry of E2
Generally, in E2 reactions the proton and the leaving group must be in an anti orientation.This allows for the best overlap of the developing pi orbitals.
RO–
In order to predict the stereochemistry of the alkene resulting from an E2 reaction:
a) rotate the C atoms so that the H to be removed by RO– and the leaving group are in the anti conformationb) the stereochemistry of the alkene resulting from the E2 reaction is as shown
Chapter 8-11
+ ROH + L–
H
Cl
D
HD
H
Chem 61Elimination Reactions
RO–
In cyclohexane systems the H— and the leaving group must be trans and diaxial
Z
rotate
RO–
SUMMARY
E1 reactions result from carbocation intermediates and are competivive with SN1 reactions.
E1 reactions may be accompanied by carbocation rearrangements.
E1 reactions generally yield the most substituted (most stable) alkene.
E1 reactions are not stereoespecific and yield a mixture of E,Z alkenes.
Relative rates: 3° > 2°.
E2 reactions result from a concerted reaction and are competitive with SN2 reactions.
E2 reactions generally produce the more stable alkene (except with bulky bases or leaving groups).
E2 reactions are stereospecific and give anti elimination of H and L.
Relative rates: 3° > 2° > 1°.
Chapter 8-12 Chem 61Substitution vs. Elimination Reactions
Factors Governing Substitution and Elimination Reactions
Structure of Alkyl Halide
Leaving group attached to methyl or primary carbon: SN2 reaction observed unless Nu: is a strong base and elevated temperature employed; then observe E2.
Leaving group attached to tertiary carbon: E2 reaction observed unless Nu: is weak base; then SN1 observed.
Solvent nucleophilicity increases with increasing electron releasing capacity ofmolecule. If the solvent has low nucleophilic properties; i.e. H2SO4, H3PO4 then E1reaction results CH3CH2OH > H2O > CH3CO2H > CF3CH2OH > CF3CO2H increasing solvent nucleophilicity
Leaving group attached to secondary carbon: if the nucleophile is less basic than HO – (e.g. – CN, – N3, – SR) then the reaction will follow SN2 path
If the Nu: is HO – or more basic (e.g. RO–, R2N–, RC≡C–), then the reaction will follow E2 path
If the Nu: is a weak nucleophile (e.g. H2O, ROH, RCO2H) the reaction will follow SN1path with some E1
The leaving group is attached to an allylic or benzylic carbon: SN1
Increasing the concentration of the nucleophile has no effect on SN1, E1 but increases SN2,E2 rates.
Temperature
Increase in temperature increases the rates of all reaction types but has a larger effect on E2 reactions.
Chapter 8-13 Chem 61Nucleophilicity
NUCLEOPHILICITY
Nucleophilic Constants of Various Nucleophiles
pKa of conjugate acid
-1.7 (CH3OH2)
-1.3
3.45
4.8
5.7
9.25
4.74
9.9
-7.7
15.7
15.7
5.8
7.9
10.7
9.3
-10.7
8.69
8.5
n(CH3I)a
0.0
1.5
2.7
4.3
4.4
5.3
5.5
5.8
5.8
5.8
6.3
6.5
6.6
6.6
6.7
6.7
7.4
7.8
8.7
9.9
10.7
11.5
Nucleophile
CH3OH
NO3–
F–
CH3CO2–
Cl–≠
(CH2)2S
NH3
N3–
PhO –
Br –
CH3O–
HO–
NH2OH
NH2NH2
(CH3CH2)3N NC–
I –
HOO–
(CH3CH2)3P
PhS–
PhSe–
Ph3Sn–
an(CH3I) = log(knucleophile/kCH3OH) in CH3OH 25°Cn = nucleophilic constant
General comments
1. Note that nucleophilicity toward CH3I does not correlate directly with basicity. (N3
–, PhO–, Br- are equivalent nucleophilicity but differ greatly in basicity. Also N3
– and CH3CO2– are nearly identical in basicity but N3
– is 30 times [1.5 log units] more nucleophilic).
2. Among neutral nucleophiles while (CH3CH2)3N is more basic than (CH3CH2)3P (pKa 10.7 vs. 8.69) the phosphine is 100 times (n = 8.7 vs 6.7) more nucleophilic.
3. Correlation of nucleophilicity with basicity is better if the attacking atom is the same. Thus CH3O– > PhO– > CH3CO2
–> NO3–
4. Nucleophilicity usually decreases going across a row in the periodic table. (HO– > F– ; PhS–> Cl–). This order is determined by electronegativity.
5. Nucleophilicity usually increases going down the periodic table (I– > Br– > Cl– > F–; and PhSe– > PhS– > PhO–) Related to weaker solvation and greater polarizability of the heavier atoms.
Substitution Reactions: Reaction with Hydrogen Halides (HX)
Alcohols do not undergo nucleophilic substitution by X– since HO– is apoor leaving group.
Alcohols do undergo substitution by X – in acidic solution.
Here the alcohol is protonated and H2O, a neutral species, is the leaving group.
+ H2OX – R—XH+
..
....
increasing reactivity of ROH toward HX
All alcohols react readily with HBr and HI; 3°, allylic and benzylic react rapidly with HCl2° and 1° alcohols require the addition of ZnCl2 for rapid reaction with HCl
Mechanism of Alcohol Substitutions
Methyl and primary alcohols follow the SN2 mechanism
H+
SN2+ H2O
CH3CH2CH2 OH CH3CH2CH2+O
H
CH3CH2CH2 BrCH3CH2CH2 O+H
H
Reactivity of Hydrogen Halides
The reactivity of hydrogen halides in alcohol substitution reactions is as follows:
HF < HCl < HBr < HIpKa 3.45 -7 -9 -9.5
The reactivity is explained since the acidity of HX increases and the nucleophilicity of X– increases going from HF to HCl to HBr to HI.
Reactivity of Alcohols Toward HX
methyl primary secondary tertiary allylic and benzylic
H
Br –
Step 1 protonation of the alcohol
CH3CH2CH2 OH
Step 2 SN2 dsiplacement of Water
CH3CH2CH2
+
O
H
Chapter 9-3
H
CH3CH2CH2 Br
Chem 61Alcohols
E
progress of reaction
E
Chapter 9-4 Chem 61
CH3 C CH2CH3
OH
CH3
CH3 C CH2CH3
+OH2
CH3
CH3 C CH2CH3
CH3
CH3 C CH2CH3
I
CH3
Step 2 loss of water to for the carbocation
– H2O
H+
CH3 C CH2CH3
+OH2
CH3
CH3 C CH2CH3
CH3
+
SN1
X –
Secondary and tertiary alcohols follow the SN1 mechanism
Step 1 protonation of the alcohol
+
Step 3 attack of halide ion on the carbocation
Rearrangement can occur
R–OH
R–O+H
R+
R–XH
Alcohols
Other Reagents for the Conversion of Alcohols to Alkyl Halides
R—Br + HOPBr2R—OH + PBr3
CCH3
CH3CH2
H
OH
CCH3
CH3CH2
H
OSOClC
CH3
CH3CH2
H
Cl
O
SClCl
CCH3
CH3CH2
H
O+S
O –
ClCl
H
H
CCH3
CH3CH2
H
OS
O
Cl
R—Cl + HCl + SO2R—OH + SOCl2
+
CH3CH2CH2 C
O
OH
CH3CH2CH2 C
O
OCH2CH2CH3
Chapter 9-5 Chem 61Conversion of Alcohols to Alkyl Halides
R3N:
Cl –
+ SO2
Esters of Alcohols
Reaction of alcohols with carboxylic acids in the presence of acid produces esters of carboxylic acids
ester
alcohol carboxylic acid
H+
heat
+ CH3CH2CH2OH
C
C
C
H
ONO2
ONO2
ONO2
H
H
H
H
C
C
C
H
O
H
H
H
H
H
H
P
O
O
OH
P
O
OH
OHCH3O S OCH3
O
O
CH3O S CH3
O
O
Inorganic esters
mineral acids such as H2SO4, HNO3 and H3PO4 form esters with alcohols to produce important compounds
dimethyl sulfate,a sulfate ester
CH3 S
O
O
Cl
OH O CH3S
O
O
a diphosphate esternitroglycerin, a nitrate ester
P-toluenesulfonates (tosylates) and methanesulfonates (mesylates) are excellent leaving groups in nucleophilic substitution reactions. They are readily prepared form an alcohol and the corresponding sulfonyl chloride.
Chapter 9-6 Chem 61Reactions of Alcohols
(CH3CH2)3N+HCl –+
a methanesulfonate (mesylate)
OTs OCH2CH2CH3
Reaction of sulfonates with nucleophiles
CH3CH2CH2O– Na+
cyclohexyl tosylate
(CH3CH2)3NCH3OH + ClSO2CH3
p-toluenesulfonylchloride(tosyl chloride)
+
CH3 C
H
CH3
C
CH3
CH3
OH CH3 C
H
CH3
C
CH3
CH3
O+H2
CH3 C
H
CH3
C +
CH3
CH3
CH3
C
CH3
C
CH3
CH3
CH2 CHCH2CH3
OH
CH CHCH2CH3
CH3
CH
OH
CH3
CH3
CH3
CH3 C
CH3
CH3
C
CH3
H
OH CH3 C
CH3
CH3
C
CH3
H
O+H2
CH3 C
CH3
CH3
C CH3
H
CH3
CH3
C
C
CH3
C
CH3
CH3
CH3
C CH3
H
CH3
Elimination (Dehydration) of Alcohols
Alcohols undergo elimination much like alkyl halides
Tertiary alcohols readily undergo dehydration by an E1 pathwaySecondary alcohols also follow an E1 path, but primary alcohols probably eliminate by an E2 mechanism
ease ofdehydration
conc. H2SO4
180° C
conc. H2SO4
100° C
conc. H2SO4
60° C(CH3)2C=CH2 +H2O
CH3CH=CH2 +H2O
CH3CH=CH2 +H2O
(CH3)3COH
(CH3)2CHOH
CH3CH2CH2OH
Mechanism:
– H+
– H2OH+
ROH2+
E
ROH
R+
progress of reaction
The most stable alkene predominates in dehydration reactions.Rearrangements can occur.
Examples:
alkene
Chapter 9-7 Chem 61Dehydration of Alcohols
H+
H2SO4
heat
H+– H2O
– H++1,2 shift+
Chapter 9-8 Chem 61Dehydration of Alcohols
O
O
CH2 CH2
ETHERS, EPOXIDES AND SULFIDES�
Ethers are derivatives of water where both hydrogens have been replaced by an alkyl group.
Ethers are less polar than alcohols and water and are not capable of hydrogen bonding to themselves because of the lack of an —OH group.
The boiling points of ethers are also much lower than alcohols of comparable molecular weight.
ethylene oxidetetrahydrofuran
CH3CH2OCH2CH3
diethyl ether
Preparation of Ethers
Williamson Ether Synthesis (SN2 Reaction of an Alkoxide with an Alkyl Halide)
SN2R1—O—R2 + X–R1O– + R2—X
Best results are obtained if the alkyl halide is methyl or primary (2° and 3° give mostly elimination)
Chapter 9-9 Chem 61Reactions of Ethers and Epoxides
OCH2CH(CH3)2 OH
H
O
C CCH3
CH3
H
H
– O
C CCH3
H3C
H
H
OCH3
HO
C CCH3
H3C
H
H
OCH3
Substitution Reactions of Ethers
Ethers are relatively unreactive compounds, but they do undergo substitution reaction when heated with hydrogen halides, particularly HI and HBr.
This is a very similar reaction to the reaction of alcohols with HX
HBrCH3CH2CH2—Br CH3CH2CH2—Br + CH3CH2CH2—OH
Br –
+CH3CH2CH2—O—CH2CH2CH3
H—BrCH3CH2CH2—O—CH2CH2CH3
+ I—CH2CH(CH3)2
HI
Reactions of Epoxides
Epoxides are strained much like cyclopropanes because their bond angles (60°) are far removed from the normal tetrahedral angle (109.5°).
The orbitals have poor overlap and the bonds are weakened. The C—O bond is also polarized and consequently, epoxides are highly reactive compounds.
Base Catalyzed Cleavage of Epoxides
Alkoxides:
unreactive with HI
nucleophile attacks at the least hindered carbon in an SN2 reaction
HOCH3
CH3O –
CH3O –
CH3OH
....
O
C CH
H
H
H
BrMgO
C CH
H
H
H
CH3
HO
C CH
H
H
HCH3
O
C CCH3
CH3
H
H
H
H
O
C CCH3
CH3
H
H
OH
CC H
H
CH3
CH3
CH3O
CH3
C CCH3
CH3O
OH
H
H
Grignard Reagents
Chapter 9-10 Chem 61Reactions of Epoxides
+O
H
H
H
OH
HH
OH
CH3MgBr
CH3–MgBr+
H+
Acid Catalyzed Cleavage
H+
CH3OH
+
CH3O—H....
+
– H+
δ+
Nucleophile attacks at the most hindered carbon since the carbon is partially positive and the C—O bond is partially broken
trans diaxial openingin cyclohexanesH2O
Chapter 9-11 Chem 61Crown Ethers and Thiols
O
K+
O
O
O
O
Na+
O
O
O
O
OO
SHBr
Crown Ethers
Crown ethers are macrocyclic ethers with repeating –OCH2CH2— units. Depending on the ring size, they effectively chelate alkali metal ions such as K+, Na+ or Li+
12-crown-518-crown-6
I SCH2CH2CH3
Thiols and Sulfides
The sulfur analog of an alcohol is a thiol, or mercaptan. Thiols are stronger acids than alcohols (pKa = 8, ROH = 16).
Thiols form weaker hydrogen bonds than alcohols due to the lower electronegativity of sulfur.
Thiols and thioethers (sulfides) are prepared by substitution reaction in the same way that alcohols and ethers are prepared.
HS–
CH3CH2CH2S–
Disulfides are formed by the oxidation of thiols and are an important structural feature in some proteins.
I2 or
K3Fe(CN)6
a disulfideRS—SRRSH
R1
Cδ+
Oδ−
R1 R1
C
O –
R1NuR1
C+
O –
R1
R2 Mg-X
R1
C
O– MgX+
R1R2R1
C+
O –
R1 R1
Cδ+
Oδ−
R1
HC
O
H
CH3 Mg-X
H C
OH
H
CH3
Grignard Reactions
Grignard reagents are organometallic reagents derived from an alkyl halide and magnesium
Since the carbon carries a partial negative charge, the carbon is a strong base and a good nucleophile.
Because carbonyl pi bonds are polarized, they can undergo a reaction called nucleophilic addition: the addition of a nucleophile to an electron deficient pi bond.
diethyl etherRδ−—Mgδ+X Grignard reagent R—X + Mg
CH3CH2—HHOHdiethyl etherCH3CH2
δ−—Mgδ+Br CH3CH2—Br + Mg
Nu:
NucleophilicAddition
Chapter 9-12 Chem 61Organometallic Compounds
NucleophilicAddition
A Grignard reaction with
1. formaldehyde produces a primary alcohol
2. H2O, H+
1.
Chapter 9-13
2. an aldehyde produces a secondary alcohol
3. a ketone produces a tertiary alcohol
4. an ester produces a tertiary alcohol (addition of two molecules of Grignard reagent)
5. ethylene oxide produces a primary alcohol
CH3CH2
C
O
H
(CH3)CHMgBrH C
OH
CH2CH3
CH(CH3)22. H2O, H+
1.
CH3CH2
C
O
CH3
(CH3)CHMgBrCH3 C
OH
CH2CH3
CH(CH3)22. H2O, H+
1.
C
O
OCH3
CH3MgBrCH3 C
OH
CH32. H2O, H+
1. 2
O
OH
Chem 61Organometallic Compounds
1. C6H5MgBr
2. H2O, H+
Chapter 10-1 Chem 61Alkynes: Structure and Bonding
ethylene: trigonal planar
2-2p's on each carboncombine to form pi-orbitals
2p
2s
1s1s
2s
2psp
1s
96 kcal hybridize
H H
H H
C C HH
C C HH
sp Hybridization
sp hybridized carbons are linear with atoms 180° apart
1-2p 2-sp's
180° apart; the remaining two 2porbitals are 90° to the sp andeach other
+–+
2s
2p
C—C σ*C—C π*C—C π
E
C—C σ
Acetylene: linear; bond angles 180° C=C bond length = 1.20Åacetylene has two perpendicular pi bonds and one sigma bond
acetylene π-orbitals
acetylene σ-orbital2-sp's
C C RR C CR
C CR
E+
R
ER
C C RR C CR
C CR
E+
R
ER
Reaction of Alkynes with E+A– Reagents
Reaction of alkynes with E+A– reagents proceed in the same manner as alkenes except different intermediates are possible
vinyl carbocation+E+
For H—X the vinyl carbocation is more stable than the bridged intermediate. Thus:
Thus the choice of intermediate depends on structure; alkyl groups tend to favor the bridged ion; groups such as phenyl which stabilize the free carbocation tend to proceed via the vinyl carbocation.
E
+but,
C6H5—C≡C—C6H5
R—C≡C—R
For Cl2, Br2:
For H–X
X2
X2
R—CR—C C—R R—C CH—R CH2—R
OOH
R—C C—R
Hg2+
R—C C—R
Hg2+
+OHH
R—C C—R
Hg2+
OH
R—C C—R
Hg2+
OH
R—C C—R
H
OHR—C C—R
H
OH
Addition of Water
R—C C—H R—C CH
H
H2SO4
Hg(II)H2O
H2O:
keto
H2O:
BH2
Chapter 10-4
R—C CH
H
enol
With alkynes this electrophilic addition reaction generates a vinyl alcohol (also called an enol). Hg(II) ion is often used.
OH
Chem 61
R—C C–H
H
Alkynes: Electrophilic Addition
Hydroboration
H+
O
enol
H
BH3
keto (aldehyde)
The relatively high acidity of the alkyne —C≡C—H bond is associated with the large degree of s character in the sp C—H bond (50% compared with33% in sp2 bonds). The carbon atom is more electronegative in the spstate; thus the C—H bond is more acidic.
The acetylide ion may be formed by such strong bases as —:NH2 (pKa33), RMgX or RLi (pKa 45-50).
No reactionNaNH2
NH3
C CH
H
C C H
C CH
C C
R C C H
CH
R C C:– Na+
CH2R
pKa = 45
+ base—H
+ base—H.
–
–
..
.
+ base
+ base
+ NH3
acetylide ion
NaNH2
NH3
pKa = 25
Chapter 10-5 Chem 61Alkynes: Acidity
sp > sp2 > sp3
Electronegativities
N < O < F
NH3 < H2O < HF
Electronegativities
acid strength
pKa 36 15.7 3.2
HC≡CH H2C=CH2 H3C–CH3
pKa 25 44 50
HC≡CH H2C=CH2 H3C–CH3HF H2O NH3
15.73.2 36
HC≡C– H2C=CH– H3C–CH2–HO– NH2
–F–
increasing acid strength
increasing base strength
R' C C:– MgBr+ R C
O
H R' C C C
O – MgBr+
H
R
R' C C C
OH
H
RR' C C—H
R' C C:– MgBr+
O
C C R'O – MgBr+
C C R'OH
H+
Nucleophilic addition reaction with acetylide ion.
Chapter 10-6 Chem 61Alkynes: Acetylides
H+CH3CH2MgBr
+
SN2 reaction with acetylide ion
R' C C:– MgBr+O
R' C C—CH2—CH2—O – MgBr+
R' C C—CH2—CH2—OH
NH3R—CH2—C≡C—R'
+
H+
R'—C≡C:– Na+ + R—CH2—L
Chapter 12-1 Chem 61Spectroscopy
Infrared and Nuclear Magnetic Resonance Spectroscopy
electromagnetic radiation: energy that is transmitted through space in the form of waves
wavelength: (λ): the distance from the crest of one wave to the crest of the next wave
frequency: (ν): the number of complete cycles per second
where c = speed of lightλcν =
Electromagnetic radiation is transmitted in particle-like packets called photons or quanta. The energy is inversely proportional to thewavelength and directly proportional to frequency.
where c = speed of light; h = Planck's constantλhcΕ =
h = Planck's constanthνΕ =
ultraviolet visible infrared radio
decreasing energy
Absorbtion of ultraviolet light results in the promotion of an electron to a higher energy orbital.
Absorbtion of infrared results in increased amplitudes of vibration of bonded atoms.
Intensity of radiation is proportional to the number of photons.
frequency
%T
100
0
Chapter 12-2 Chem 61Infrared Spectroscopy
Infrared is recorded as %T versus wavelength or frequency
When a sample absorbs at a particular wavelength or frequency, %T is reduced and a peak or band is displayed in the spectrum.
O CH3
CH3
O CH3
CH3
Infrared Spectroscopy
Infrared is recorded as %T versus wavelength or frequency
When a sample absorbs at a particular wavelength or frequency, %T is reduced and a peak or band is displayed in the spectrum.
Nuclei of bonded atoms undergo vibrations similar to two ballsconnected by a spring. Depending on the particular atoms bonded toeach other (and their masses) the frequency of this vibration will vary.
Infrared energy is absorbed by molecules resulting in an excitedvibrational state. Vibrations occur in quantized energy levels and thus a particular type of bond will absorb only at certain frequencies.
Both stretching and bending vibrations can be observed by infrared.
bendingstretching
800100015002000250030003500
C—C str
C—N str
C—O str
OH bend
CH bendNH bend
C=C str
C=N str
C=O str
C≡N strCH str
OH and NH str
Chapter 12-3 Chem 61Infrared Spectroscopy
Interpretation of Infrared Spectra
Correlation tables
Infrared spectra of thousands of compounds have been tabulated and general trends are known. Some common functional groups areshown below.
sp3 C—Csp2 C=Csp2 C—C (aryl)sp C≡Csp3 C—Hsp2 C—H
sp C—HC(CH3)2
weak, not useful
1600-1700 cm–1
1450-1600 cm–1
2100-2250 cm–1
2800-3000 cm–1
3000-3300 cm–1
3300 cm–1
1360-1385 cm–1 (two peaks)
Alcohols and Amines
O—H or N—H C—O or C—N
C—C and C—H Bonds
Ethers
C—O
3000-3700 cm–1
900-1300 cm–1
1050-1260 strong
Carbonyls One of the most useful absorbtions in infrared 1640-1820 cm-1
Ketones (saturated) C=O
Aldehydes C=O; C—H(O)
Carboxylic acids C=O;
C(O)—OH
Esters C=O ;
C(O)—OR
1640-1820 cm–1
1640-1820 cm–1
2820-2900 and 2700-2780 cm–1 (weak but characteristic)
1640-1820 cm–1
3330-2900 cm–1
1640-1820 cm–1
1100-1300 cm–1
Chapter 13-1 Chem 61Nuclear Magnetic Resonance Spectroscopy
Nuclear Magnetic Resonance (NMR) Spectroscopy
Some atomic nuclei (1H, 13C, others) behave as if they are spinning...theyhave a nuclear spin.
Spinning of a charged particle creates a magnetic moment.
If an external magnetic field is applied, these small magnetic moments (of the nuclei) either align with the field (α) or against the field (β), about 50% withand 50% against the field at any one time.
HoHo
α
β
∆Ehν
∆E
β
α
Ho = the external magnetic field
Resonance: the flip of the magnetic moment from parallel to antiparallel tothe external magnetic field.
Irradiation at the frequency equal to the energy difference, ∆E, causesresonance.
∆E depends on the external magnetic field.
Protons (or other nuclei) in different magnetic environments resonate atdifferent field strengths.
A proton which resonates at a higher field is in a stronger magneticenvironment or shielded.
A proton which resonates at a lower magnetic field is said to be deshielded.
Different magnetic environments are created by different electron densities in the vicinity of a proton.
2.1 2.7 3.0
Pi electron effects
Magnetic fields created by pi electrons are directional and said to have an anisotropic effect.
Chapter 13-2 Chem 61
ppm
In methyl halides, the more electronegative the halogen, the more deshielded the prIn methyl halides, the more electronegative the halogen, the more deshielded the pr
In methyl halides, the more electronegative the halogen, the more deshielded the protons on the methyl. This is because F is inductively more electronwithdrawing, causing the carbon to be more positive and thus pulling moreelectrons away from the hydrogen and causing it to be less shielded.
H3C—F H3C—Cl H3C—Br H3C—I
C OH
R
H
δ 4.3
Nuclear Magnetic Resonance Spectroscopy
distance from TMS in HzMHz of spectrumδ =
Adjacent electron withdrawing groups, highly electronegative atoms, or the hybridization of the carbon to which the proton is bonded can alter the magnetic environment.
The local electrons create a small electric and magnetic field around a proton and shield it.
The more electron density present around the proton, the greater the field and the greater the shielding.
Resonances are reported in chemical shifts (δ) downfield from tetramethylsilane (TMS) (CH3)4Si.
H deshielded
H deshielded
Ho
The pi system of benzene creates a magnetic field or ring current which deshields the protons attached to the ring.
Similarly, pi electrons in a C=O bond create a field which deshields theproton bonded to the C=O of an aldehyde. This is also affected by theinductive effect of the C=O.
H C
H
H
C
H
H
OHH C
H
H
C
H
Cl
C
H
H
H
Equivalent and Nonequivalent Protons
Protons that are in the same magnetic environment are equivalent and havethe same chemical shifts.
Protons in different magnetic fields are nonequivalent and have differentchemical shifts.
Magnetic equivalence is usually the same as chemical equivalence.
Equivalence can be established by symmetry operations such as rotation,mirror planes and centers of symmetry
Chemically equivalent protons have the same chemical shifts.
To determine if protons are chemically equivalent, replace one by a different group, e.g. D or Br.
Then replace a different one by the same group and compare the twocompounds. If they are identical, the protons are equivalent.
equivalent, but not to CH3 protons
Chapter 13-3 Chem 61Nuclear Magnetic Resonance Spectroscopy
equivalent Equivalent protons can be on different carbons.
all six are equivalent
Protons which are homotopic or enantiotopic resonate at the same chemical shift in the NMR.
If protons are interconverted by rotation about a single bond, they will average out on the NMR time scale and a single resonance will be observed.
ClH2CCH2Cl anti and gauche forms rapidly interconvert and a single resonance is observed.
Axial and equatorial hydrogens in cyclohexane average to a single peak because of rapid ring inversion.
Diastereotopic hydrogens are chemically nonequivalent and thus give different chemical shifts in the NMR
Chapter 13-4 Chem 61Nuclear Magnetic Resonance Spectroscopy
Intergration
The spectrometer can integrate and determine the relative number of hydrogens associated with each resonance in the NMR spectrum by determining the area under the peaks.
Spin-Spin Coupling
for example...
CH3CH2OCH3
TMS
33
2
If a proton (Ha) is bonded to a carbon which is bonded to a carbon that hasone proton (Hb), Ha will appear as a doublet
Since in half the molecules, Hb will be in the α state and in half will be in the β state, Ha will experience two different magnetic fields and two peaks (adoublet) will appear for Ha.
Ha without an adjacent hydrogen
Ha with Hb adjacent in the α state
Ha with Hb adjacent in theβ state
For one adjacent hydrogenα or β
Chapter 13-5 Chem 61Nuclear Magnetic Resonance Spectroscopy
For two adjacent hydrogens: Hb, Hc
At any one time Hb or Hc could be in the α or β state (50:50) thus 4 combinations for Hb, Hc exist:
αbαc αbβc βbβc gives 1:2:1 triplet βbαc
When both Hb and Hc are α, a different field is observed than if both are β or one is α and one is β.
When one is α and one is β, the field is the same. That is, βbαc and αbβc produce the same field and a single signal for Ha is observed with twice the intensity.
Thus three signals are observed in a 1:2:1 ratio: a so-called triplet
For three adjacent protons:
ααα ααβ αββ βββ 1:3:3:1 quartet αβα βαβ βαα ββα
Thus the splitting pattern of a particular proton or equivalent protons will be a pattern with n+1 lines where n is the number of adjacent equivalent protons.
The separation of the peaks in a splitting pattern is called the coupling constant, J.
Chapter 13-6 Chem 61Nuclear Magnetic Resonance Spectroscopy
Splitting Diagrams
Splitting patterns for protons can be constructed in diagram form by startingwith one line to represent the unsplit proton resonance.
If an adjacent proton Hb affects Ha it is split into a doublet; if anotherequivalent proton to Hb is present, each line of the double will be split into a doublet, since the coupling constant J is the same, the two center linesoverlap and a only three lines are observed with the center line twice theheight.
This can be repeated for additional adjacent protons.
Ha without an adjacent hydrogen
Ha split by one adjacent hydrogen
Ha split by a second adjacent hydrogen
Ha split by a third adjacent hydrogen1 3 3 1
splitting diagram
1 1
1 2 1
Chemical Exchange and Hydrogen Bonding
CH3OH, methanol would be expected to give an NMR spectrum of adoublet for the CH3 and a quartet for the OH. For a dilute sample at -40° inCCl4 this is the case.
If the NMR spectrum is run at 25° as a more concentrated sample only twosinglets are observed. This is because the intermolecular hydrogenbonding in methanol allows the rapid exchange of the OH proton from oneCH3OH molecule to another, effectively averaging the spin states of the OH proton and resulting in no change in the magnetic field due to the OH.
Amines and other compounds which can undergo hydrogen bonding canalso show this effect. Thus the NMR spectra of alcohols, amines andcarboxylic acids are temperature, concentration and solvent dependent.
Chapter 13-7 Chem 61Nuclear Magnetic Resonance Spectroscopy
CHEMISTRY 61 Name___________________________________________Exam 1Dr. M.T. Crimmins Pledge: I have neither given nor received aid on this exam.September 15, 1998
Signature________________________________________
I. Nomeclature (12 points) Give the IPUAC name for the following compounds: Indicate R, S, cis, trans,E, or Z where appropriate.
1.
CH2CH3 C H C H CH2 CH2 C H CH3
CH3
CH2CH2CH2CH3
CH3 ______________________________
2.
H3CC
CCH2CH3
H
CH3 ______________________________
3.
CH3
H______________________________
4.
CH(CH3)2______________________________
II. A. Write valid Lewis structures for the following species. Show all nonbonding (unshared) electronsand indicate any formal charges . (6 points).
5. [H2COH]+ 6. IO4 –
7. Give the hybridization of the indicated atoms in the species below (6 points)
H3C C N:H3C N.. CH2
H3C CO
O CH3
2
8. Draw three structural isomers for C3H6O. Indicate what type of functional group is represented byeach compound (e.g. carboxylic acid) (6 points).
9. Draw all the possible stereoisomers of 3-bromo-2-butanol. Indicate if they are chiral, meso or achiral andindicate their relationship to each other. (i.e. enantiomers, diastereomers) (8 points)
10. Draw both chair conformations of trans-1,2-dimethylcyclohexane. If one is more stable than theother, circle it. (6 points)
11. Draw an energy diagram for one 360° rotation about the C3-C4 C–C bond of hexane. Also draw aNewman Projection of the most stable conformation. (8 points).
12. Circle the molecule(s) which have a permanent dipole. In those which have a permanent dipole, showthe direction of the overall dipole. (6 points)
C
O
H H ClB
Cl
Cl
H3C O H
3
13. In the space to the right, indicate if each of the pairs of molecules below are identical compounds,enantiomers, diastereomers, structural isomers, or conformational isomers. (9 points).
a.
H3C
CH3
H3CCH3 CH3
CH3 ________________________
b.
BrH
O HH
Br
H
H
O H
________________________
c.
C CH3C
H CH3
HC C
H
H3C CH3
H________________________
14. What two effects cause cyclobutane and cyclopropane to be higher in energy than cyclohexane? (3pts)
15. Label the species below as Lewis Acids or Lewis Bases (4 points)
Br + H3CO–
_____________ _____________
16. Circle the following which has the highest heat of combustion per CH2 unit. (4 points)
a. cyclopentane
b. cyclopropane
c. cyclohexane
d. cyclobutane
17. Indicate the geometry of carbon in the molecules below (e.g. trigonal bipyramidal). (6 points)
a. CH3CH3 b. H2C=O c. HC≡CH
____________ ______________ ______________
4
18. Circle the statement(s) which are true of enantiomers. (4 points)
a. They have a non-superimposable mirror image.
b. They have no asymmetric carbon atoms.
c. They are chiral.
d. They do not rotate the plane of polarized light.
19. Draw an energy diagram of the molecular orbitals of the C=C bond of ethylene (H2C=CH2) and labelthem (e.g. σ) and indicate their relative energies. Indicate the ground state electronic configuration ofthe C=C electrons. (6 points)
20. What kind of molecular orbital results (σ, σ*, π, π*) results when the pairs of orbitals show below arecombined in the indicated manner? (6 pts)
+ + +
a. b . c.
1
CHEMISTRY 61 Name___________________________________________Exam 1Dr. M.T. Crimmins Pledge: I have neither given nor received aid on this exam.September 21, 1999
Signature________________________________________
I. Nomeclature (12 points) Give the IPUAC name for the following compounds: Indicate R, S, cis, trans,E, or Z where appropriate.
1.
CH2CH3CH2 C H C H C H CH2 C H CH3
CH3
CH2CH2CH2CH3
CH3CH2CH3 ____________________________
2.C(CH3)3
CH3
_____________________________
3.
CH2CH2CH3CCH2CH3
H3C
H _____________________________
4.
O H
_____________________________
5. A. Write valid Lewis structures for the following species. Show all nonbonding (unshared) electronsand indicate any formal charges . (6 points).
CH2N2 CH3–
6. Give the hybridization of the indicated atoms in the species below (6 points)
H2C C C(CH3)2H3C N.. CH3
CH3
H3C CO
O CH3
2
7. Write structures for the each of the following having a molecular formula of C4H8O (6 points).
a. a n aldehyde b. a cyclic alcohol c. an ether
8. What intermolecular forces exist between molecules of each of the following. (6 points).
a. CH3CH2CH2CH2CH3 _________________________
b.
CH3 S CH3
O
..
_________________________
c. CH3CH2OH _________________________
9. Draw all the possible stereoisomers of 3,4-dibromohexane. Indicate if they are chiral, meso or achiraland indicate their relationship to each other. (i.e. enantiomers, diastereomers) (8 points)
10. Label the following molecules as chiral or achiral.
CH3
OH H C
OH
CH2CH3
CH3CH2OH
H
HO
H
_____________ ______________ ______________
11. Draw both chair conformations of trans-1,2-dimethylcyclohexane. If one is more stable than theother, circle it. (6 points)
3
12. Draw an energy diagram for one 360° rotation about the C2-C3 C–C bond of butane. Also draw aNewman Projection of the most stable conformation. (8 points).
13. Circle the molecule(s) which have a permanent dipole. In those which have a permanent dipole, showthe direction of the overall dipole. (6 points)
14. In the space to the right, indicate if each of the pairs of molecules below are identical compounds,enantiomers, diastereomers, structural isomers, or conformational isomers. (9 points).
a.
H3C
CH3
H3CCH3 CH3
CH3
H3C
CH3
H3CCH3 CH3
CH3
________________________
b.
BrH
O HH
Br
H
H
O H
________________________
c.
C CH3C
H CH3
HC C
H
H3C CH3
H________________________
15. What effect(s) cause cyclobutane and cyclopentane to be non-planar? (3 pts)
4
16. Label the species below as Lewis Acids or Lewis Bases (4 points)
H3C+ H2C=CH2
_____________ _____________
17. Indicate the geometry of carbon in the molecules below (e.g. trigonal bipyramidal). (6 points)
H2C C CH2C
CH3
H3CCH3
CH4
____________ ______________ ______________
18. Draw and label the atomic orbitals which combine to form the molecular orbitals of formaldehyde,H2C=O. . (6 points)
19. What kind of molecular orbital results (σ, σ*, π, π*) results when the pairs of orbitals show below arecombined (mathematically) in the indicated manner? (6 pts)
– + +
a. b . c.
1
CHEMISTRY 61 Name___________________________________________Exam 2Dr. M.T. Crimmins Pledge: I have neither given nor received aid on this exam.October 22, 1998
Signature________________________________________
I. REACTIONS: Predict the major organic products of the following reactions.INDICATE STEREOCHEMISTRY AS NEEDED. (4 points each)
1.CH3 HI
2.HBr
peroxideCH2
3.
C C
H
H H
CH2CH3
1. BH3
2. H2O2, NaOH
4.CH3
CH3
H2, Pd/C
5.
C
CCH2
CH2H3C
H3C
C
CCO2CH3H
+heat
H3C H
6.
C C CH3H3CCl2
1 equivalent
7.
C
CCH2
HH2C
H
HBr, -80°C
8.CH3 1. Hg(OAc)2, H2O
2. NaBH4
2
II. Multiple Choice: Place the letter in the blank and Circle the best answer (only one). (4 points each)
___9. The rate limiting step for hydration of an alkene with water and acid is
a. protonation of the alkene by a strong acidb. addition of water to a carbocation to form the protonated alcoholc. loss of a proton from the protonated alcohol to form the alcohol.d. simultaneous addition of H+ and HO – to the alkene.
___10. Which of the following free radicals is the most stable?
a. c. c. d.
H3C C
CH3
H. H3C C
CH3
CH3. H C
CH3
H.
H3C C
CH3
.___11. Which of the following indicated hydrogens is the most acidic?
a. CH3CH=CH2 b. CH3C≡C–Hc. CH3CH2CH3 d. H–CH2CH2OCH3
___12. In the addition of HBr to 1,3-butadiene the 1,2 product predominates at -80°C while the 1,4 product predominates at 40°C. The 1,4 product is said to result from
a. kinetic control.b. thermodynamic control.c. a Diels Alder reaction.d. the s-cis diene.
___13. Which of the following alkenes would have the lowest heat of hydrogenation?
a. b. c. d.
CC
H3C CH3
CH2CH3H3C
CHC
H2C CH3
CH2CH3H3C
CHCH
H3C CH3
HCH3C CH2
CCH
H3C CH2
CH3C CH3H
H
___14. What is the stereochemical relationship of the products of the following reaction?
C
CCH2CH3
HH
H3C
Br2
a. diastereomersb. enantiomersc. identical (only one stereosiomer of the product is formed).d. cis-trans isomerse. conformational isomers
___15. Which of the carbocations below is the most stable?
a. b. c. d.
CCH3
HH + C
CH3
H
+ CCH2+
CCH3
CH3
+
3
___16. What is the hybridization of the positively charged carbon in the carbocation below?
CCH2+
a. sp3 b. sp2 c. sp d. s
V. Mechanisms. Give a stepwise, detailed mechanism with arrows and intermediates for the following reactions. Be sure to account for stereochemistry as needed. (6 points each)
17.
C
CCH3
HH3C
H
Br2C C
Br
CH3
Br
H3C
H H
18.
C CH2
CH3
CH3 X + Y –
C CH2CH3
Y
CH3
X
Syntheses: Give reagents to carry out the transformations below. (5 points each)
19.
C C
H
H H
H
ClCH2–CH2Cl
20.
C C HH3C H3C C
O
CH2CH3
4
21. Consider the energy diagram below and answer the questions using the letters on the diagram. (10 points).
A
B
C
D
EF
G
HJ
K
L
ENERGY
PROGRESS OF REACTION
MN
a. What point(s) in the diagram represent transition states? _______________
b. What point(s) in the diagram represent intermediates? _______________
c. What is the energy of activation for the reaction? _______________
d. What is the rate-limiting step in the reaction? _______________
e. Is the reaction endergonic or exergonic? _______________
f. What is the free energy change of the reaction? _______________
g. Does G or C form faster from E? _______________
22. Draw the HOMO (highest occupied molecular obrital) and the LUMO (lowest unoccupied molecularobrital) of 1,3-butadiene and label them. Circle the one which would interact favorably with theethylene orbital below in a Diels-Alder reaction. (4 points)
1
CHEMISTRY 61 Name___________________________________________Exam 2: October 21, 1999Dr. M.T. Crimmins Pledge: I have neither given nor received aid on this exam.
Signature________________________________________
I.REACTIONS: Predict the major organic products of the following reactions.INDICATE STEREOCHEMISTRY AS NEEDED. (4 points each)
1.1. Hg(OAc)2, H2O
2. NaBH4
CH3
2.
1. BH3
2. H2O2, HO –C C
H
CH3CH2CH3
CH3
3.HCl (1 equiv)
C C HCH3CH2
4.CH3 Br2
H
5.H2
poisoned catalyst(Pd/BaSO4)
C CCH3CH2 CH2CH3
6.
CH2CH3C
H3C
Br2, H2O
7.
HBr, peroxideC
CCH3
H
H
8.
CH2C
H3C
H3C
H2O, H+
9.NaNH2
CH3CH2BrC CCH3CH2 H
2
II. Multiple Choice: Circle the best answer (only one). (3 points each)
10. Which of the following alkenes is the most stable?
CH3
CH3
CH3
CH3
CH2
CH3
CH3
CH3
a. b. c. d.
11. Which of the following is the least stable carbocation?
a. H2C=CHCH2+ c. C6H5(CH3)2C+b. (CH3)3C+ d. CH3CH2+
12. In the following reaction what is the relationship of the products formed?
CH3
H Br2
a. enantiomers c. structural isomersb. meso compound d. diastereomers
13. The carbon -carbon triple bond of an alkyne is composed of_________
a. two σ bonds and one π bondb. three σ bondsc. one σ bond and two π bondsd. three π bonds
14. The free energy of reaction is
a. the difference in energy between the reactants and an intermediate in the reactionb. the difference in energy between the reactants and the transition statec. the difference in energy between the reactants and the productsd. the difference in energy between the transition state and the productse. the difference in energy between the intermediate and the products
15. What is the hybridization of the positively charged carbon in H3C+
a. p c. sp e. d2sp3
b. sp2 d. sp3 f. s
16. A secondary cation is more stable than a primary carbocation because of
a. overlap of a filled p orbital with an adjecent σ* antibonding orbitalb. overlap of an empty p orbital with adjacent σ bonding orbitalsc. resonanced. deduction
17. Which of the following free radicals is the most stable?
H3C CH
CH3
.CH3
.H3C C CH3
.H C CH3
.
CH3 H
a) b) c) d)
3
18. Which of the following is not true of H2C=CH2?
a) It contains 5 σ bonds.b) It has bond angles of 120°.c) All the atoms are in the same plane.d) It has free rotation about the C=C bond.
Syntheses: Give reagents to carry out the transformations below. (4 points each)
19.
C CH2
CH3
CH3
C CH3CH3
OCH3
CH3
20.H3CC C–H CH3CH2CH2CH2CH3
21.
HC CCH2CH3 CH3CH2 C
O
CH3
22. Draw an energy diagram for the hypothetical exergonic reaction below where B is an unstableintermediate.Label the positions for A, B, and C on the diagram and indicate the energy of activation on thediagram. (5 points).
A B Cslow fast
23. Draw resonance structures (4 pts each) for
a) benzyl cation
b) acetate ion (CH3CO2–)
4
V. Mechanisms. Give a stepwise, detailed mechanism with arrows and intermediates for the following reactions. (4 points each)
24.
CH
CH2
H2O, H+
C CHCH3
CH3
OH
C
CH3
H3C
CH3 CH3
CH3
25.
HC
CH3C Br2
H
CH3 H3C
H3C Br
Br
H
H
26.
HBr
C CH2
H3C
H3C
C CH3H3C
CH3
Br
1
CHEMISTRY 61 Name___________________________________________Exam 3Dr. M.T. Crimmins Pledge: I have neither given nor received aid on this exam.November 24, 1998
Signature________________________________________
I. Multiple Choice: Place the letter in the blank and Circle the best answer (only one). (4 points each)
___1. The rate limiting step for free radical halogenation is
a. initiationb. hydrogen atom abstraction from carbon by the halogen radicalc. attack of carbon radical on molecular halogend. termination
___2. Which of the following are "concerted" reactions?
a. SN1 d. E2b. SN2 e. SN1 and E1c. E1 f. SN2 and E2
___3. Reaction of a strong base with a tertiary alkyl halide is most likely to result in:
a. no reaction c. SN1 substitutionb. E2 elimination d. E1 elimination
___4. Which of the following statements is correct?
a. Free radical bromination is more selective than chlorination because the transition state is more reactant-like.
a. Free radical bromination is more selective than chlorination because the transition state is more product-like.
c. Free radical chlorination is more selective than bromination because the transition state is more product-like.
d. Free radical chlorination is more selective than bromination because the transition state is more reactant-like.
___5. Which of the folowing species is the most nucleophilic?
a. NH3 b. H3P c. H2S d. H2O
___6. SN1 reactions lead to
a. formation of free radicalsb. retention of stereochemistryc. racemizationd. inversion of stereochemistry
___7. Which of the following would undergo the fastest dehydration reaction in the presence of acid?
a. b. c. d.
CH3
O H
CH2OHO H
CH3
CH3
O H
2
___8. Which of the following reactions will proceed the fastest?
a. b. CH2Cl
NaOHCH2Br NaOH
c. d.
CH2BrNaOH
CH2BrNaOH
CH3
.
II. REACTIONS: Predict the major organic products of the following reactions.INDICATE STEREOCHEMISTRY AS NEEDED. (4 points each)
9.CH2CH3 Br2, light
10.
C HCH3CH2CH2OH, H+CH2
O
11.CH3
O H
1. NaH
2. CH3I
12.
CH(CH3)2H
(CH3)3CO–K+
BrH
13.
C(CH3)3
OH
H
H
NaOH, H2O
3
14.
CH3
Br
H
H CH3Se– Na+
15.
H3CC
CC
CH3
CH3 CH3Br
HCH3OH
16.
CH3CH2CH2Br1. Mg
2. H2C=O3. H2SO4
V. Mechanisms. Give a stepwise, detailed mechanism with arrows and intermediates for the following reactions. Be sure to account for stereochemistry as needed. (6 points each)
17.CH3
CH3
O H
H3PO4, heat CH3
CH3
18.
CH4 + Br2 CH3Br + HBrheat or light
4
19.
C CH3
CH3
CH3
OCH3CH2 ICH3CH2 C CH3
CH3
CH3
IHI
+excess
Syntheses: Give reagents to carry out the transformations below. (5 points each)
20.I
21.
OCH2CH2CH3
OCH3
22. Only one monochlorination product is obtained from an alkane with the molecular formula C5H12. Whatis the structure of the alkane? (4 points)
23. Draw the transition state for the reaction of CH3Br with HO–. (4 points)
– 1 –
CHEMISTRY 61 Name___________________________________________Exam 3Dr. M.T. Crimmins Pledge: I have neither given nor received aid on this exam.November 23, 1999
Signature________________________________________
II. Reactions: Predict the major organic product of the following reactions. If more than one product isformed give both and indicate the major product. Indicate stereochemistry where necessary. (4points each)
1.
+H CO2CH3
H CO2CH3
heat
2.
HBr
-80 °C
3.
H3C C
CH3
H
CH2CH2CH3
Br2, light
4.Br
CH3
H
H
NaI
5.
CH3
H3CH
Br
H2O
low temperature
6.
C C
H
BrPh
HPh
CH3 (CH3)3CO – K +
7.
C CH
CH3
Ph
Br
CH2
CH3OH
– 2 –
8. Indicate if the following compounds are aromatic, non-aromatic or anti-aromatic. (2 points each)
H
++
a. b. c. d.
H
e.
9. List three criteria for aromaticity. (6 points)
1.______________________________________
2.______________________________________
3.______________________________________
II. Multiple Choice: Place the letter in the blank and Circle the best answer (only one). (3 points each)
___10. In the following solvolysis reaction what is the relationship of the products formed?
H3C C
CH2CH3
Br
CH2CH2CH3CH3OH
a. enantiomers c. structural isomersb. meso compound d. diastereomers
___11. Which of the following reactions would proceed the fastest?
a. CH3CH2CH3 + Br2 + light → CH3CHBrCH3
b. CH3CH2CH3 + F2 + light → CH3CHFCH3
c. CH3CH2CH3 + I2 + light → CH3CHICH3
d. CH3CH2CH3 + Cl2 + light → CH3CHClCH3
___12. Which of the following is the strongest nucleophile?
a. CH3NH– c. CH3O-
b. Cl- d. CH3Se-
___13. Which of the following alkyl halides would undergo the fastest SN2 reaction?
CH2I CH2Cla. b.
b. CH3CH2CH2CH2—I d. (CH3CH2)2CH—I
___14. Which of the following are "concerted" reactions?
a. SN1 d. electrophilic additionb. Diels-Alder reaction e. SN1 and E1c. E1
– 3 –
___15. Reaction of a hydroxide ion (HO–) with a primary alkyl halide is most likely to result in:
a. SN2 substitution c. SN1 substitutionb. E2 elimination d. E1 elimination
___16. Which of the following statements is correct?
a. Free radical bromination is more selective than chlorination because the transition state for bromination is more reactant-like.
a. Free radical bromination is more selective than chlorination because the rate limiting step for bromination is more endothermic than for chlorination.
c. Free radical bromination is more selective than chlorination because the rate limiting step for bromination is more exothermic than for chlorination.
d. Free radical chlorination is more selective than bromination because the transition state for chlorination is more reactant-like.
___17. Which of the following would be the rate limiting step in a free radical halogenation?
___18. Ionization to give a carbocation and a leaving group is the rate determining step for
a. SN1 c. E1 and E2 e. SN1 and SN2b. SN2 d. E1 f. SN1 and E1
Syntheses. Give reagents to show how to synthesize the compounds on the right from the compoundson the left. They may require more than one step. (4 pts each)
19.CH3 CH2OH
20.
H3C C
CH3
CH3
CH
CH3
CH3 H3C C
CH3
CH3
C
CH3
CH2
– 4 –
V. Mechanisms. Give a stepwise, detailed mechanism with arrows and intermediates for the following reactions. (5 points each)
21.Br2, light
CH3CH2CH3 CH3CHBrCH3
22.
CH3Br
CH3
OCH3CH3
+CH3OH
23.HBr
40 °CH2C=CH CH=CH2 H3C–CH CH=CH2 H3C–CH CH–CH2Br+
Br
– 5 –
24. The energy diagram for the hypothetical reaction A + B → D → G + H is shown below. (6pts).
E
reaction coordinate
A + B
C
D
E
G
F
H
a. What is the rate determining step?_____________
b. What happens to the rate if the concentration of A is doubled? _____________
c. What is the rate expression? rate = _______________
d. If D is a charged species and A and B are neutral, what effect will a polar protic solvent have onthe rate of reaction?___________________
e. What is the kinetically favored product?__________
f. What is the thermodynamically favored product?_________